| GenBank top hits | e value | %identity | Alignment |
|---|
| KAF7129225.1 hypothetical protein RHSIM_Rhsim10G0050800 [Rhododendron simsii] | 3.8e-31 | 41.38 | Show/hide |
Query: GKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKLKEDQKR--------KHEANTVYD----ALVCVESNTKCSNHSSDWILDSATSVHLASD
G ++ S SR K R+E+ECF+CHK GH + +CR L+++ K+ K + V +VC + + W++DS S H+ S
Subjt: GKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKLKEDQKR--------KHEANTVYD----ALVCVESNTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
R F S+T G G VRMGN SK +GDV L+T G KL+L+DVR VPNI++NLIS GKL D+GY+ +FG + KL GS VVA G + STLY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
++K
Subjt: VAK
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| RVW14266.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.1e-30 | 40.39 | Show/hide |
Query: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
+ K K + S R ++ +VEC+YCHKKGH K +CRKL KE K K+ D V + + +DW++DS S H+ S
Subjt: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
FTS++ G G VRMGN SK +GD+ L+T G KL+LRDVR VP+I++NLIS GKL D+GY F + KL GS VVA G + +LY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
+ K
Subjt: VAK
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| RVW42505.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.1e-30 | 40.39 | Show/hide |
Query: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
+ K K + S R ++ +VEC+YCHKKGH K +CRKL KE K K+ D V + + +DW++DS S H+ S
Subjt: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
FTS++ G G VRMGN SK +GD+ L+T G KL+LRDVR VP+I++NLIS GKL D+GY F + KL GS VVA G + +LY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
+ K
Subjt: VAK
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| RVW84195.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.1e-30 | 40.39 | Show/hide |
Query: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
+ K K + S R ++ +VEC+YCHKKGH K +CRKL KE K K+ D V + + +DW++DS S H+ S
Subjt: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
FTS++ G G VRMGN SK +GD+ L+T G KL+LRDVR VP+I++NLIS GKL D+GY F + KL GS VVA G + +LY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
+ K
Subjt: VAK
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| RVW94144.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.9e-31 | 40.89 | Show/hide |
Query: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
K K K + S R ++ +VEC+YCHKKGH K +CRKL KE K K+ D V + + +DW++DS S H+ S
Subjt: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
FTS++ G G VRMGN SK +GD+ L+T G KL+LRDVR VP+I++NLIS GKL D+GY F + KL GS VVA G + +LY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
+ K
Subjt: VAK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2I0IXX9 Integrase catalytic domain-containing protein | 1.3e-29 | 38.71 | Show/hide |
Query: KVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKLKEDQ-----KRKHEANTVYDA-----LVCVESNTKCSNHSSDWILDSATSVHLASDRSLFT
K + S R K K R V C++ K+GH+K +CR LK++Q +K E T + +VC E+ + S W+ D+ S H+ R F+
Subjt: KVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKLKEDQ-----KRKHEANTVYDA-----LVCVESNTKCSNHSSDWILDSATSVHLASDRSLFT
Query: SFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLNVAKRS
S+T G +G VRMGNG++ K IGDV L+TE G KL+L+ VR VP I++NLIS+G+L D+GY EF + + KL GS +VA G + TLY+ R+
Subjt: SFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLNVAKRS
Query: RRQWMPVKAADDPTTKI
R V A+D + K+
Subjt: RRQWMPVKAADDPTTKI
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| A0A438BTH6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.3e-31 | 40.39 | Show/hide |
Query: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
+ K K + S R ++ +VEC+YCHKKGH K +CRKL KE K K+ D V + + +DW++DS S H+ S
Subjt: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
FTS++ G G VRMGN SK +GD+ L+T G KL+LRDVR VP+I++NLIS GKL D+GY F + KL GS VVA G + +LY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
+ K
Subjt: VAK
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| A0A438E432 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.3e-31 | 40.39 | Show/hide |
Query: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
+ K K + S R ++ +VEC+YCHKKGH K +CRKL KE K K+ D V + + +DW++DS S H+ S
Subjt: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
FTS++ G G VRMGN SK +GD+ L+T G KL+LRDVR VP+I++NLIS GKL D+GY F + KL GS VVA G + +LY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
+ K
Subjt: VAK
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| A0A438HI91 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.3e-31 | 40.39 | Show/hide |
Query: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
+ K K + S R ++ +VEC+YCHKKGH K +CRKL KE K K+ D V + + +DW++DS S H+ S
Subjt: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
FTS++ G G VRMGN SK +GD+ L+T G KL+LRDVR VP+I++NLIS GKL D+GY F + KL GS VVA G + +LY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
+ K
Subjt: VAK
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| A0A438IBT7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-31 | 40.89 | Show/hide |
Query: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
K K K + S R ++ +VEC+YCHKKGH K +CRKL KE K K+ D V + + +DW++DS S H+ S
Subjt: KGKDKVDEENEPSSSRKKWKNRNEVECFYCHKKGHFKSQCRKL--KEDQKRKHEANTVYDALVCVES---------NTKCSNHSSDWILDSATSVHLASD
Query: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
FTS++ G G VRMGN SK +GD+ L+T G KL+LRDVR VP+I++NLIS GKL D+GY F + KL GS VVA G + +LY Q
Subjt: RSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLN
Query: VAK
+ K
Subjt: VAK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-23 | 36.73 | Show/hide |
Query: SSSRKKWKNRNEV---ECFYCHKKGHFKSQC---RKLK-EDQKRKHEANTVY------DALVCVESNTKC---SNHSSDWILDSATSVHLASDRSLFTSF
S +R K KNR++ C+ C++ GHFK C RK K E +K++ NT + ++ + +C S S+W++D+A S H R LF +
Subjt: SSSRKKWKNRNEV---ECFYCHKKGHFKSQC---RKLK-EDQKRKHEANTVY------DALVCVESNTKC---SNHSSDWILDSATSVHLASDRSLFTSF
Query: TGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLNVAK
G G V+MGN SK + IGD+ +KT G LVL+DVR VP+++MNLIS L DGY F +++ +L GS V+A G + TLY+ + +
Subjt: TGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLADDGYRCEFGSRQCKLKFGSQVVAVGHRKSTLYKCQLNVAK
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| P25601 Putative transposon Ty5-1 protein YCL075W | 3.7e-05 | 34.09 | Show/hide |
Query: VCVESNTKCSNHSSDWILDSATSVHLASDRSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISI
+C+ S+T + SS+WI D+ + H+ DRS+F+SFT G G + G V++ T + L DV +VP++ +NLIS+
Subjt: VCVESNTKCSNHSSDWILDSATSVHLASDRSLFTSFTGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.3e-05 | 28.65 | Show/hide |
Query: ECFYCHKKGHFKSQCRKLKE-----DQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSATSVHLASD---RSLFTSFTGGHHGLVRMGNGRTSKTSEI
+C C +GH +C +L+ + ++ T + + + S S++W+LDS + H+ SD SL +TGG V + +G T S
Subjt: ECFYCHKKGHFKSQCRKLKE-----DQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSATSVHLASD---RSLFTSFTGGHHGLVRMGNGRTSKTSEI
Query: GDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLAD-DGYRCEFGSRQCKLKFGSQVVAV--GHRKSTLYK
G SL T+ L L ++ +VPNI NLIS+ +L + +G EF ++K + V + G K LY+
Subjt: GDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLAD-DGYRCEFGSRQCKLKFGSQVVAV--GHRKSTLYK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-04 | 29.94 | Show/hide |
Query: EPSSSRKKWKNRNEV----ECFYCHKKGHFKSQCRKLKEDQKRKHEANTVYD-------ALVCVESNTKCSNHSSDWILDSATSVHLASD---RSLFTSF
+PSSS + NR C C +GH +C +L + Q ++ + A + V S +N W+LDS + H+ SD S +
Subjt: EPSSSRKKWKNRNEV----ECFYCHKKGHFKSQCRKLKEDQKRKHEANTVYD-------ALVCVESNTKCSNHSSDWILDSATSVHLASD---RSLFTSF
Query: TGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLAD
TGG V + +G T + G SL T L L V +VPNI NLIS+ +L +
Subjt: TGGHHGLVRMGNGRTSKTSEIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLAD
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