CuGenDBv2

Gene ID	Lag0022744
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ribonuclease H-like superfamily protein
Genome location	chr7:36913087..36914704
RNA-Seq Expression	Lag0022744
Synteny	Lag0022744
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]

7.0e-52

54.19

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        +C RK+ GG+GFR IS FNQAMLAKQSWRI+R+P+SLL KTLRG+YFK GSFL+A +G  PS +WRSI WG+DLF KG+RW+VGNG  IN+ +DPW+ R 
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAME
        GN  P+    H++   V  L++    W E  +R+ F  ++ + IL  P   +D  DEIIWG DK  +FSV+SAYHL ++
Subjt:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAME

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]

2.4e-52

29.88

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Query:  KESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQGNTR
        K  GG+GFR +S+FNQA++AKQ WRIM+ P+SL+ + L+ RYFK   F+ A +G  PS  WRSI WG+ +  KG RWR+GNG+ + +  + WI R    +
Subjt:  KESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQGNTR

Query:  PLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKGLWST
        P+S         V  L+D+   WRE++I Q F   D E I+ +P   +  +D++IW YDKK  +SVKS Y +AM  K     S S++ +  + W+ +W  
Subjt:  PLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKGLWST

Query:  NALPRAKVCGWKIINYIIPSKSNIQNKGV-----------DLNTL-----------KDWSTKDYWN-----------WM----ENQLSKEELSRGVTIMW
            + K+  W+  + ++P+  N+  K V            + T+           K W   +              WM      Q +K E +    ++W
Subjt:  NALPRAKVCGWKIINYIIPSKSNIQNKGV-----------DLNTL-----------KDWSTKDYWN-----------WM----ENQLSKEELSRGVTIMW

Query:  KIWDFRNK--IESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASPGCW-NLKSDAAWNDKLNRGGLGWVVRDSGGSLVCFRMHK
         IW  RNK   E K + P       +   ++ ++     + ++  +   +  + ++    P  W  +  DAA + +    GLG VVRDS G+     +  
Subjt:  KIWDFRNK--IESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASPGCW-NLKSDAAWNDKLNRGGLGWVVRDSGGSLVCFRMHK

Query:  IEKKWPVKVLEALAMLKGLTEIAITCARRAIPIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRLLNTDAHCFARL
        +     V + EA AM  GL           I    ESD+LEVI+++  ++  LTE+      I   + N    K +H  R  N  AH  A+L
Subjt:  IEKKWPVKVLEALAMLKGLTEIAITCARRAIPIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRLLNTDAHCFARL

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]

2.0e-51

29.86

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        + + K  GGLGFR  S FNQA++AKQ+WR+++ PNSL+ + L+ RYF+  SFL A  G   S  WRSI WG+ +  KG RWR+GNGK I I +D W+ R 
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG
           RP+          V  L+  +N W E  +RQ F   D  +IL +P   + A+DE++W YDK+  +SVKS Y LA+ +K   S S ++ S  + +W  
Subjt:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG

Query:  LWSTNALPRAKVCGWKIINYIIPSKSNI-QNKGVDLNTLK---------------------------------DWSTKDYWNWMEN---QLSKEELSRGV
        LW+     + K+  W+  N ++PS  N+ + K V+  T K                                 + +++D ++ ++N   +L K +L   V
Subjt:  LWSTNALPRAKVCGWKIINYIIPSKSNI-QNKGVDLNTLK---------------------------------DWSTKDYWNWMEN---QLSKEELSRGV

Query:  TIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASP--GCWNLKSDAAWNDKLNRGGLGWVVRDSGGSLVCFR
         + W  W  RNK    +     + + ++  +    TA   ++      I   + + Q+    P    + +  DAA+N K    G+G V+RDS G +V   
Subjt:  TIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASP--GCWNLKSDAAWNDKLNRGGLGWVVRDSGGSLVCFR

Query:  MHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSC----GVKFRHYNRLLNTDAHCFARL
        +++   K    + EA A+L GL ++A      ++ I  ESD LEV+ ++       +E+    +  ++ + N       V   H  R  N  AH  A++
Subjt:  MHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSC----GVKFRHYNRLLNTDAHCFARL

XP_030502375.1 uncharacterized protein LOC115717530 [Cannabis sativa]

1.8e-52

28.54

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        +CK K  GG+GFR    FNQA+LAKQ+WRI  NP+SLL + L+ RYF   +FLEA++GH+PSL+W+ I W ++L +KG RW+VG+G+ I  + DPWI   
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLA--METKDHLSASQSDNSKLNSFW
            P   K    G+ V +L+ D   W   ++ Q F  AD++ IL +P  +   +D +IW +    +++V S YHL   ++T D  S+S+      +S+W
Subjt:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLA--METKDHLSASQSDNSKLNSFW

Query:  KGLWSTNALPRAKVCGWKIINYIIPSKSNIQNKGV-------------------------------DLNTLKDW------STKDYWNWMENQLSKEELSR
        K  WS    P+ K+  WK ++  +P  + +  + V                               + +   DW         DY   + + LSK E+ +
Subjt:  KGLWSTNALPRAKVCGWKIINYIIPSKSNIQNKGV-------------------------------DLNTLKDW------STKDYWNWMENQLSKEELSR

Query:  GVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLK--TQLTMRIGSHVSQNQ-----------------RAVASPGCW--------NLKSD
            +W IW+ RN+     Q   A  L +   + L +  NA  +  T  T    +H   +Q                 +AV +   W         L  D
Subjt:  GVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLK--TQLTMRIGSHVSQNQ-----------------RAVASPGCW--------NLKSD

Query:  AAWNDKLNRGGLGWVVRDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIE-AESDALEVINILAGETEDLTEVKSFTYQILVLVAN
        AA +      G+G ++RDS G +V     ++   +    +EA A+   L        ++ +P   AESDAL V+N L      ++        I  L++ 
Subjt:  AAWNDKLNRGGLGWVVRDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIE-AESDALEVINILAGETEDLTEVKSFTYQILVLVAN

Query:  SCGVKFRHYNRLLNTDAHCFAR
           V   H     N  AH  A+
Subjt:  SCGVKFRHYNRLLNTDAHCFAR

XP_030505432.1 uncharacterized protein LOC115720422 [Cannabis sativa]

1.8e-52

31.75

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        +C+ K  GG+GFR +   NQA+LAKQ+WR++  P+S+  + L+ RYF+  SFL+A+ GH+PS SW S+ WG+DL   G  W+VGNG+ I    D WI   
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKD--HLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFW
         N R L  KD   L   RV   + DN +W    +   F+   +E ILH+P G  D  D +IW  D   + +VKSAYHLA      L  S S+ S  N +W
Subjt:  GNTRPLSIKD--HLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFW

Query:  KGLWSTNALPRAKVCGWKIINYIIPSKSNIQNK-----------GVDLNTL--------------------------KDWSTKDYWNWMENQLSKEELSR
        K  W+    P+ K  GW+  ++I+P+  N+  K           G  L T+                          ++   KD+       L+ ++ S 
Subjt:  KGLWSTNALPRAKVCGWKIINYIIPSKSNIQNK-----------GVDLNTL--------------------------KDWSTKDYWNWMENQLSKEELSR

Query:  GVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASPGCWNLKSDAAWNDKLNRGGLGWVVRDSGGSLVCFR
         +  +W IW+FRNK   +   P A +L   I + L     A +          + +Q        G + L +DAA ND+  + GLG V++D  G ++   
Subjt:  GVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASPGCWNLKSDAAWNDKLNRGGLGWVVRDSGGSLVCFR

Query:  MHKIEKKWPVKVLEALAMLKGL
              K+   + EA+A+  GL
Subjt:  MHKIEKKWPVKVLEALAMLKGL

TrEMBL top hits

e value

%identity

Alignment

A0A803P9P5 Uncharacterized protein

2.1e-54

29.42

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        +CK K  GG+GF+    +NQA+LAKQSW I  NP+SLL+K L+ RYFK  +FLEA +G  PSL+WRSI WGK+L  KG RW+VGNG  I   +DPW+   
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG
         + +PL  K+    ++V  L+ +   W   +++Q F  +D+  I  +P    D  D++IW ++   ++SVKS Y LA   ++ L A+ S+NS    +WK 
Subjt:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG

Query:  LWSTNALPRAKVCGWKIINYIIPSKSNIQNKGVDLNTL----------------------KDW---------------STKDYWNWMENQLSKEELSRGV
         WS     + K+  W+ ++  +P    + ++ +  + +                      K W               S  D    M    S +++ +  
Subjt:  LWSTNALPRAKVCGWKIINYIIPSKSNIQNKGVDLNTL----------------------KDW---------------STKDYWNWMENQLSKEELSRGV

Query:  TIMWKIWDFRNKIE--SKYQTPSADNLFT-----SINSSLKDTANAYLKTQLTMRIGSHVSQNQRAV---ASPGCWNLKSDAAWNDKLNRGGLGWVVRDS
         I+W IW+ RNK    SK + P     F         S+  +T+ A   T  T R     SQ Q         G   L +DAA N   N  G G ++R+ 
Subjt:  TIMWKIWDFRNKIE--SKYQTPSADNLFT-----SINSSLKDTANAYLKTQLTMRIGSHVSQNQRAV---ASPGCWNLKSDAAWNDKLNRGGLGWVVRDS

Query:  GGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIE-AESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRLLNTDAHC
         G ++       +  +  +++EALA++  L  +  +     +P+   E+D+L V+  L      +++       I +LV+N    +  H  R  N  AH 
Subjt:  GGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIE-AESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRLLNTDAHC

Query:  FAR
         A+
Subjt:  FAR

A0A803PJK4 Uncharacterized protein

1.1e-53

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        +CK K  GG+GF+    +NQA+LAKQ+WRI+ NP+SL  + L+ RYFK G+FL A +G  PS++WR I WGK+L   G RW+VGNG  I    DPW+   
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG
         + +PL  K     L V  L+D +  W    ++  F   DI+ IL +P       D+IIW ++   +++VKS Y LA +  D  + S S +S     WK 
Subjt:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG

Query:  LWSTNALPRAKVCGWKIINYIIPSKSNIQN---KGVDLNTL-------------------KDW---------------STKDYWNWMENQLSKEELSRGV
         W  N   + ++  WK +   +P  + +Q     G D+ +L                   K W               + KD +        ++EL +  
Subjt:  LWSTNALPRAKVCGWKIINYIIPSKSNIQN---KGVDLNTL-------------------KDW---------------STKDYWNWMENQLSKEELSRGV

Query:  TIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASP-------GCWNLKSDAAWNDKLNRGGLGWVVRDSGGS
         I+W IW  RNK     +    + L  S  S L +   +   T   +R  + V +N     +P       G   L +DAA ++     G G ++RDS G 
Subjt:  TIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASP-------GCWNLKSDAAWNDKLNRGGLGWVVRDSGGS

Query:  LVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIE-AESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRLLNTDAHCFAR
        +V          +  +V+EALA+   L  +        +PI   E+D+L V+  L   + ++++  S    I +L++N  GV+  H  R  NT AH  A+
Subjt:  LVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIE-AESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRLLNTDAHCFAR

A0A803PLN3 Uncharacterized protein

1.6e-54

30.35

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        +CK KE GGLGF  ++ FNQA+LAKQ WR++ NP SLL + L+  Y+   SF+E       S  W+ ICWG+ +  +G RWRV NG+ + +  D WI R 
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG
          T  L   +     ++ H ++ +  W+ + +++ F   DI  +  +P      +D + W Y     + VKS Y +  E   H   S S+    + +WK 
Subjt:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG

Query:  LWSTNALPRAKVCGWKIINYIIPSKSNIQNKGVDLNTLKD--WSTKDYWNWMENQLSKEELSRGVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKD
        LWS    PR K+ GW++ +  +P+K+N+ ++G+D+N   D   S  D    ++ QL K E    + IMW IW+ RN+  +K    +   L   I  +  D
Subjt:  LWSTNALPRAKVCGWKIINYIIPSKSNIQNKGVDLNTLKD--WSTKDYWNWMENQLSKEELSRGVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKD

Query:  TANAYLKTQ-LTMRIGSHVSQNQRAVASPGCWNLKSDAAWNDKLNRGGLGWVVRDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPI
         +    + Q LT++   H           GC +L  DAA N      G G++ R+  G ++   M        V++ EA A+L+ L     T     IP+
Subjt:  TANAYLKTQ-LTMRIGSHVSQNQRAVASPGCWNLKSDAAWNDKLNRGGLGWVVRDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPI

Query:  EAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRLLNTDAHCFAR
        E +SD   +++ +    ++L+ V +  +QI   + +S      H +R  N  AH  AR
Subjt:  EAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRLLNTDAHCFAR

A0A803QC75 Uncharacterized protein

2.5e-55

29.42

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        +CK K  GG+GFR    FNQA+LAKQ+WRI   P+SLL + L+ RYF   +FLEA++GH+PSL+W+ I W ++L +KG RW+VG+G+ I   +DPWI   
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLA--METKDHLSASQSDNSKLNSFW
            P        G+ V +L+ D   W   +++Q F A D+E IL +P     ++D +IW +    +++VKS YHLA  M+  D  S+S  D    + +W
Subjt:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLA--METKDHLSASQSDNSKLNSFW

Query:  KGLWSTNALPRAKVCGWKIINYIIPSKSNIQNKGV-------------------------------DLNTLKDWSTK------DYWNWMENQLSKEELSR
        K  WS    P+ K+  W+ I+  +P  +++  + V                                 N + DW         DY   +    SK E+ +
Subjt:  KGLWSTNALPRAKVCGWKIINYIIPSKSNIQNKGV-------------------------------DLNTLKDWSTK------DYWNWMENQLSKEELSR

Query:  GVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQL------TMRIGSHVSQN---QRAVASP----------------GCWNLKSDAA
            +W IW  RN+I   ++   A +L +   + L +  NA  + +L      T R    +  +   Q A ASP                  + L  DAA
Subjt:  GVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQL------TMRIGSHVSQN---QRAVASP----------------GCWNLKSDAA

Query:  WNDKLNRGGLGWVVRDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIE-AESDALEVINILAGETEDLTEVKSFTYQILVLVANSC
         +      G+G ++RDS G++V     +    +    +EA+A+ + L  +     ++ +PI   ESDAL V+N L      ++        +L L++   
Subjt:  WNDKLNRGGLGWVVRDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIE-AESDALEVINILAGETEDLTEVKSFTYQILVLVANSC

Query:  GVKFRHYNRLLNTDAHCFAR
         V   H  R  N  AHC A+
Subjt:  GVKFRHYNRLLNTDAHCFAR

A0A803QH07 Uncharacterized protein

2.1e-57

28.35

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ
        +CK K  GG+GFR    FNQA+LAKQ+WRI   P+SLL + L+ RYF   SFL+A++GH+PS +W+SICWG++L +KG R++VGNG  I+   DPWI   
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQ

Query:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG
         + RP+S     + L V  L++DN  W   ++   F+  D+E IL +P  +   +D +IW +     ++VKS +HLA   +D L +S SD ++   +WK 
Subjt:  GNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKG

Query:  LWSTNALPRAKVCGWKIINYIIP----------------------------------SKSNIQNKG---VDLNTLKDWSTKDYWNWMENQLSKEELSRGV
         W+ +  P+ ++  WK+I +I+P                                     NI  +    +D N  +     DY +++    ++E+    +
Subjt:  LWSTNALPRAKVCGWKIINYIIP----------------------------------SKSNIQNKG---VDLNTLKDWSTKDYWNWMENQLSKEELSRGV

Query:  TIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKD-TANAYLKTQLTMRIGSHVSQNQRAVASP------------GCWNLKSDAAWNDKLNRGGLGWVV
         ++W IW  RN++    +   + ++ T      +D +   +L +Q T       S +Q +                  + L  DAA N    + G+G ++
Subjt:  TIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKD-TANAYLKTQLTMRIGSHVSQNQRAVASP------------GCWNLKSDAAWNDKLNRGGLGWVV

Query:  RDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGL-----TEIAITCARRAIPIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRL
        R   G +V      ++  +    +EA A+   L     ++++IT          E+DAL V   L     DL+      + I  L++    V   H  R 
Subjt:  RDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGL-----TEIAITCARRAIPIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHYNRL

Query:  LNTDAHCFARLVADL
         N  AH  AR    L
Subjt:  LNTDAHCFARLVADL

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

1.1e-12

25.42

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Query:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAP----SLSWRSICWG-KDLFMKGFRWRVGNGKLINIENDP
        +C  K+ GGLG R   + N+A+++K  WR+++  NSL    L+ +Y  G   +  +    P    S +WRSI  G +D+   G  W  G+G+ I    D 
Subjt:  MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAP----SLSWRSICWG-KDLFMKGFRWRVGNGKLINIENDP

Query:  WINRQGNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIED-------------ILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKD
        W+    + +PL   D+ +       +   + W   +  +G++ A I+              +L + TG   A+D + W + +   FSV+SAY +      
Subjt:  WINRQGNTRPLSIKDHLKGLRVEHLLDDNNSWREEVIRQGFEAADIED-------------ILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKD

Query:  HLSASQSDNSKLNSFWKGLWSTNALPRAKVCGWKIINYII
         L+  +     + SF+  LW      R K   W + N  +
Subjt:  HLSASQSDNSKLNSFWKGLWSTNALPRAKVCGWKIINYII

P93295 Uncharacterized mitochondrial protein AtMg00310

3.6e-19

45.37

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Query:  MCKRKE-SGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINR
        +CK KE  GGLGFR +  FNQA+LAKQS+RI+  P++LL + LR RYF   S +E +VG  PS +WRSI  G++L  +G    +G+G    +  D WI  
Subjt:  MCKRKE-SGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINR

Query:  QGNTRPLS
        +    PL+
Subjt:  QGNTRPLS

Arabidopsis top hits

e value

%identity

Alignment

AT4G29090.1 Ribonuclease H-like superfamily protein

2.3e-29

24.56

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Query:  KESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWIN------
        K  GG+GF+ I AFN A+L KQ WR++  P SL+ K  + RYF     L A +G  PS  W+SI   +++  +G R  VGNG+ I I    W++      
Subjt:  KESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWIN------

Query:  --RQGNTRPLSIKDHLKGLRVEHLLDDN-NSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQS-DNSKL
          R     P         L+V  L+D++   WR++VI   F   + + I  +  G +   D   W Y     ++VKS Y +  +  +  S+ Q      L
Subjt:  --RQGNTRPLSIKDHLKGLRVEHLLDDN-NSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQS-DNSKL

Query:  NSFWKGLWSTNALPRAKVCGWKIINYIIP---------------------SKSNIQN--------------KGVDLNTLKDWSTKDYWN--WMEN----Q
        N  ++ +W +   P+ +   WK ++  +P                      K  + +                + +    +W+   Y N  W+ N     
Subjt:  NSFWKGLWSTNALPRAKVCGWKIINYIIP---------------------SKSNIQN--------------KGVDLNTLKDWSTKDYWN--WMEN----Q

Query:  LSKEELSRGVT-IMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASPGCW-NLKSDAAWNDKLNRGGLGWVVR
           E+ S+ V  ++W++W  RN++  + +  +A  +       L++            +   + S   R    P  W    +DA WN    R G+GWV+R
Subjt:  LSKEELSRGVT-IMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASPGCW-NLKSDAAWNDKLNRGGLGWVVR

Query:  DSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAI---------PIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHY
        +  G          E KW      AL  LK + E  +   R A+          +  ESD+  +I IL  + E    +K     +  L++    VKF   
Subjt:  DSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAI---------PIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFRHY

Query:  NRLLNTDAHCFAR
         R  NT A   AR
Subjt:  NRLLNTDAHCFAR

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.6e-20

45.37

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Query:  MCKRKE-SGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINR
        +CK KE  GGLGFR +  FNQA+LAKQS+RI+  P++LL + LR RYF   S +E +VG  PS +WRSI  G++L  +G    +G+G    +  D WI  
Subjt:  MCKRKE-SGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINR

Query:  QGNTRPLS
        +    PL+
Subjt:  QGNTRPLS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGCAAAAGAAAAGAATCAGGGGGCTTGGGATTTAGACATATATCAGCTTTCAACCAAGCTATGCTTGCCAAGCAAAGCTGGAGGATTATGCGAAATCCTAATAGCCT
CCTCTACAAAACTCTTCGAGGTAGATACTTTAAAGGGGGATCCTTCTTAGAAGCGACTGTGGGTCATGCTCCTTCCCTCTCATGGAGAAGTATTTGCTGGGGTAAAGACC
TCTTCATGAAAGGATTCAGATGGAGAGTAGGCAACGGCAAACTTATTAATATTGAGAATGACCCATGGATCAACCGGCAAGGAAACACTAGACCCCTCTCCATTAAAGAT
CATCTCAAAGGTTTAAGGGTGGAGCACCTCCTGGATGACAACAACTCATGGAGAGAAGAAGTCATCAGACAAGGCTTCGAAGCCGCAGATATTGAGGATATCCTCCATAT
GCCTACTGGTCACAAGGATGCCAAAGATGAAATCATCTGGGGATATGACAAAAAAAGGGTTTTTTCGGTTAAAAGTGCTTACCACTTAGCCATGGAAACCAAGGATCACC
TCTCAGCCTCGCAATCTGACAATAGCAAGCTAAATTCCTTTTGGAAGGGATTATGGTCAACTAATGCCCTCCCAAGAGCTAAAGTTTGCGGTTGGAAGATCATAAACTAC
ATCATCCCCTCCAAATCCAATATCCAAAATAAGGGAGTTGATCTCAATACTCTGAAAGATTGGTCAACCAAGGATTATTGGAATTGGATGGAGAATCAATTGAGCAAAGA
GGAGCTTTCAAGAGGTGTGACGATCATGTGGAAAATTTGGGACTTTCGCAACAAAATTGAATCAAAGTACCAGACCCCATCAGCAGACAACCTTTTCACTAGTATTAATT
CAAGCTTAAAAGACACTGCAAATGCGTACCTCAAGACCCAATTGACGATGAGAATTGGGAGCCACGTGAGTCAGAATCAGCGAGCTGTGGCCTCTCCAGGATGCTGGAAC
CTCAAATCTGATGCGGCCTGGAATGATAAGCTGAACAGAGGAGGGCTTGGTTGGGTTGTTCGTGACTCAGGTGGATCCTTAGTCTGCTTCAGAATGCACAAAATCGAGAA
GAAATGGCCAGTCAAAGTTTTAGAAGCTTTGGCGATGTTGAAAGGGTTAACGGAAATTGCGATTACCTGTGCTAGGAGAGCAATTCCAATCGAGGCGGAGTCTGATGCGC
TGGAAGTCATCAACATCCTCGCCGGCGAGACAGAGGACCTCACCGAGGTGAAGTCCTTCACATATCAAATTCTTGTGTTGGTTGCGAACTCCTGTGGAGTGAAATTTCGC
CACTATAATAGACTTTTGAACACAGATGCACACTGTTTTGCTAGGCTCGTCGCCGATCTCCCCTCCGGTAGTTTAGTCGAGGGTGAGGGTTTTTCGCGGGAAGAAGACTA
TATTTTTTGGGAGCCTTGTTTTCCCTTTTGGTCTTTCCCTCTATTAAATGAGGGCAGGCGTGTTTTGGTTGGTTCGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MCKRKESGGLGFRHISAFNQAMLAKQSWRIMRNPNSLLYKTLRGRYFKGGSFLEATVGHAPSLSWRSICWGKDLFMKGFRWRVGNGKLINIENDPWINRQGNTRPLSIKD
HLKGLRVEHLLDDNNSWREEVIRQGFEAADIEDILHMPTGHKDAKDEIIWGYDKKRVFSVKSAYHLAMETKDHLSASQSDNSKLNSFWKGLWSTNALPRAKVCGWKIINY
IIPSKSNIQNKGVDLNTLKDWSTKDYWNWMENQLSKEELSRGVTIMWKIWDFRNKIESKYQTPSADNLFTSINSSLKDTANAYLKTQLTMRIGSHVSQNQRAVASPGCWN
LKSDAAWNDKLNRGGLGWVVRDSGGSLVCFRMHKIEKKWPVKVLEALAMLKGLTEIAITCARRAIPIEAESDALEVINILAGETEDLTEVKSFTYQILVLVANSCGVKFR
HYNRLLNTDAHCFARLVADLPSGSLVEGEGFSREEDYIFWEPCFPFWSFPLLNEGRRVLVGS

Lag0022744 (gene) of Sponge gourd (AG-4) v1 genome