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Lag0022749 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022749
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr7:37064259..37065017
RNA-Seq ExpressionLag0022749
SyntenyLag0022749
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB63566.1 hypothetical protein L484_026904 [Morus notabilis]1.2e-0635.9Show/hide
Query:  LKRDFLFERGFSGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        ++R F++ RG     P F+ + IA H W  FC  P +   Q+VRKFYAN +  +   +  RG  + ++   IN LY+L
Subjt:  LKRDFLFERGFSGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.3e-0530.61Show/hide
Query:  CFVHLLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        CFV   A+  Y  +  R   FE GF      + +L   +   +  H W+ F   P  VNA +V++FY+NI + +   V+ RG+ + ++P+ IN  + L
Subjt:  CFVHLLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]3.6e-0839.78Show/hide
Query:  ARAKYAE-LLKRDFLFERGFSGD------LPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        A  +Y E +  R    E+GF GD       P F+   I  H W++FCA PE + A +VR+FYAN+   D   V  RGV+V  S   IN +Y L
Subjt:  ARAKYAE-LLKRDFLFERGFSGD------LPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.2e-0542.42Show/hide
Query:  GDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        G LP F+   I  H W+ FCA PE     +VR+FYAN+   +   V  RGV+V WS   IN ++ L
Subjt:  GDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]5.8e-0636.56Show/hide
Query:  ARAKYAELLKRDFL-FERGFSGD------LPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        A A+Y E +K   L  E+GF+ +       P F+   I  H W++FCA  E     +VR+FYAN+   +   V  +GV+V WS   IN L+ L
Subjt:  ARAKYAELLKRDFL-FERGFSGD------LPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein1.7e-0839.78Show/hide
Query:  ARAKYAE-LLKRDFLFERGFSGD------LPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        A  +Y E +  R    E+GF GD       P F+   I  H W++FCA PE + A +VR+FYAN+   D   V  RGV+V  S   IN +Y L
Subjt:  ARAKYAE-LLKRDFLFERGFSGD------LPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

A0A2P5EYL5 Uncharacterized protein2.8e-0636.56Show/hide
Query:  ARAKYAELLKRDFL-FERGFSGD------LPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        A A+Y E +K   L  E+GF+ +       P F+   I  H W++FCA  E     +VR+FYAN+   +   V  +GV+V WS   IN L+ L
Subjt:  ARAKYAELLKRDFL-FERGFSGD------LPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

A0A6A2ZUE4 Uncharacterized protein6.2e-0630.61Show/hide
Query:  CFVHLLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        CFV   A+  Y  +  R   FE GF      + +L   +   +  H W+ F   P  VNA +V++FY+NI + +   V+ RG+ + ++P+ IN  + L
Subjt:  CFVHLLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

W9R159 Uncharacterized protein5.6e-0735.9Show/hide
Query:  LKRDFLFERGFSGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL
        ++R F++ RG     P F+ + IA H W  FC  P +   Q+VRKFYAN +  +   +  RG  + ++   IN LY+L
Subjt:  LKRDFLFERGFSGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVINGLYNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCGAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGTACCTGTTACCCCTGAAATACAGAAAGTAAAAGCAAAGAAGAAGAAGATGCCAGAGGAAAA
AAAAGCGAAAAGAAGGAGAAGGCAACAAAGGGCTGAGGATCAAGAGGCTGTACAGAAGGCGACGGATGATGTTACTGCCACAGTAGAAGAAGGAAATCCAAAAGAGCCAG
ATGTACAGAACCCAGAGAAGGTTGAGCCGAGAATGGTGGATACGGAGGAAGTTCAAGTAGAGAATACCGAGGAGATTCAAAAAAAGCAGGCTGAGGAGAGGACAGAAAGG
GGCAAAAGTGTTGTTGAAGCATCGGAAGAACCTGACGAAATAGATGAGCCACAATTGCCGTATGACTGCTTTGTCCATCTTCTTGCCCGAGCAAAATATGCTGAGCTGCT
GAAAAGAGACTTCCTGTTTGAGAGAGGTTTTAGTGGTGATCTTCCGCATTTTCTGAGGACCGGCATTGCAAACCACGGTTGGGAGATATTTTGTGCAAAGCCTGAATCTG
TGAACGCACAGGTGGTGCGCAAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGGTCGAGGAGTCGAAGTCGACTGGAGTCCTAGTGTTATTAACGGA
CTGTATAACCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCGAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGTACCTGTTACCCCTGAAATACAGAAAGTAAAAGCAAAGAAGAAGAAGATGCCAGAGGAAAA
AAAAGCGAAAAGAAGGAGAAGGCAACAAAGGGCTGAGGATCAAGAGGCTGTACAGAAGGCGACGGATGATGTTACTGCCACAGTAGAAGAAGGAAATCCAAAAGAGCCAG
ATGTACAGAACCCAGAGAAGGTTGAGCCGAGAATGGTGGATACGGAGGAAGTTCAAGTAGAGAATACCGAGGAGATTCAAAAAAAGCAGGCTGAGGAGAGGACAGAAAGG
GGCAAAAGTGTTGTTGAAGCATCGGAAGAACCTGACGAAATAGATGAGCCACAATTGCCGTATGACTGCTTTGTCCATCTTCTTGCCCGAGCAAAATATGCTGAGCTGCT
GAAAAGAGACTTCCTGTTTGAGAGAGGTTTTAGTGGTGATCTTCCGCATTTTCTGAGGACCGGCATTGCAAACCACGGTTGGGAGATATTTTGTGCAAAGCCTGAATCTG
TGAACGCACAGGTGGTGCGCAAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGGTCGAGGAGTCGAAGTCGACTGGAGTCCTAGTGTTATTAACGGA
CTGTATAACCTTTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERENEEEEVPVTPEIQKVKAKKKKMPEEKKAKRRRRQQRAEDQEAVQKATDDVTATVEEGNPKEPDVQNPEKVEPRMVDTEEVQVENTEEIQKKQAEERTER
GKSVVEASEEPDEIDEPQLPYDCFVHLLARAKYAELLKRDFLFERGFSGDLPHFLRTGIANHGWEIFCAKPESVNAQVVRKFYANIDKEDGFQVIGRGVEVDWSPSVING
LYNL