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Lag0022751 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022751
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr7:37091423..37093296
RNA-Seq ExpressionLag0022751
SyntenyLag0022751
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032338.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-2667.82Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSMISYAQLP+SFW Y VKI V+ILN VPSKSV ETPFELW+GRK +L H ++  CP +++ TNSK LEP  ++C FVGYPKE R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
KAA0060254.1 gag/pol protein [Cucumis melo var. makuwa]7.7e-2766.67Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSMISYA LPNSFW Y+V+  VYILN VPSKSV+ETP +LW GRK +L HFR+  CP  ++E N K LEP  K+CLFVGYPK  R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
KAA0062410.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2665.52Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSM+SYAQLP+SFW Y+VK  V+ILN VPSKSV ETPFELW+GRK +L HFR+  CP  ++ TN K LEP  ++C F+GYPKE R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]2.9e-2666.67Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSMISYA LPNSFW Y+V+  VYILN VPSKSV ETP +LW GRK +L HFR+  CP  ++E N K LEP  K+CLFVGYPK  R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
TYK02506.1 gag/pol protein [Cucumis melo var. makuwa]2.9e-2666.67Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSM+SYAQLP+SFW Y+V+  V+ILN VPSKSV ETPFELW+GRK +L HFR+  CP  M+ TN K LEP  ++C FVGYPKE R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
TrEMBL top hitse value%identityAlignment
A0A5A7SP51 Gag/pol protein4.9e-2767.82Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSMISYAQLP+SFW Y VKI V+ILN VPSKSV ETPFELW+GRK +L H ++  CP +++ TNSK LEP  ++C FVGYPKE R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
A0A5A7UYX7 Gag/pol protein3.7e-2766.67Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSMISYA LPNSFW Y+V+  VYILN VPSKSV+ETP +LW GRK +L HFR+  CP  ++E N K LEP  K+CLFVGYPK  R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
A0A5D3BHG7 Gag/pol protein1.4e-2666.67Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSMISYA LPNSFW Y+V+  VYILN VPSKSV ETP +LW GRK +L HFR+  CP  ++E N K LEP  K+CLFVGYPK  R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
A0A5D3BWA6 Gag/pol protein1.4e-2666.67Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSM+SYAQLP+SFW Y+V+  V+ILN VPSKSV ETPFELW+GRK +L HFR+  CP  M+ TN K LEP  ++C FVGYPKE R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
A0A5D3DS50 Gag/pol protein1.9e-2665.52Show/hide
Query:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
        MVRSM+SYAQLP+SFW Y+VK  V+ILN VPSKSV ETPFELW+GRK +L HFR+  CP  ++ TN K LEP  ++C F+GYPKE R
Subjt:  MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIR
SwissProt top hitse value%identityAlignment
P04146 Copia protein5.4e-0732.14Show/hide
Query:  RSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFE---TPFELWKGRKATLHHFRVLECPTFM-IETNSKNLEPHCKICLFVGY
        R+M+S A+L  SFW  +V    Y++N +PS+++ +   TP+E+W  +K  L H RV     ++ I+      +      +FVGY
Subjt:  RSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFE---TPFELWKGRKATLHHFRVLECPTFM-IETNSKNLEPHCKICLFVGY
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.7e-0524.49Show/hide
Query:  SMISYAQLPNSFWDYSVKIVVYILNVVPSKSV-FETPFELWKGRKATLHHFRVLECPTF--MIETNSKNLEPHCKICLFVGYPKEIREYIVERLEGAK
        +++S+A +P ++W Y+  + VY++N +P+  +  E+PF+   G        RV  C  +  +   N   L+   + C+F+GY      Y+   L+ ++
Subjt:  SMISYAQLPNSFWDYSVKIVVYILNVVPSKSV-FETPFELWKGRKATLHHFRVLECPTF--MIETNSKNLEPHCKICLFVGYPKEIREYIVERLEGAK
Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.1e-0526.83Show/hide
Query:  SMISYAQLPNSFWDYSVKIVVYILNVVPSKSV-FETPFELWKGRKATLHHFRVLECPTF--MIETNSKNLEPHCKICLFVGY
        +++S+A +P ++W Y+  + VY++N +P+  +  ++PF+   G+       +V  C  +  +   N   LE   K C F+GY
Subjt:  SMISYAQLPNSFWDYSVKIVVYILNVVPSKSV-FETPFELWKGRKATLHHFRVLECPTF--MIETNSKNLEPHCKICLFVGY
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGTTCGATGATTAGCTATGCTCAGTTGCCTAACTCATTTTGGGATTATTCAGTTAAGATTGTAGTTTATATTCTGAACGTCGTTCCATCAAAGAGTGTTTTTGA
AACACCTTTTGAGCTTTGGAAAGGGCGTAAAGCTACTTTACATCATTTCAGAGTTTTGGAATGTCCTACATTCATGATAGAGACAAATTCGAAGAATTTGGAACCTCATT
GTAAAATATGCCTATTTGTAGGTTATCCCAAGGAAATAAGAGAATATATTGTTGAGCGACTTGAGGGAGCAAAATCTGTGCTGCAACAAAGCAAGAAGGAGAGCCATTTT
AATGAACTGAATTCAGTTAAGCTATTCTCCGATTTAAGGAGCAAGGAGAGCCATCCACGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGTTCGATGATTAGCTATGCTCAGTTGCCTAACTCATTTTGGGATTATTCAGTTAAGATTGTAGTTTATATTCTGAACGTCGTTCCATCAAAGAGTGTTTTTGA
AACACCTTTTGAGCTTTGGAAAGGGCGTAAAGCTACTTTACATCATTTCAGAGTTTTGGAATGTCCTACATTCATGATAGAGACAAATTCGAAGAATTTGGAACCTCATT
GTAAAATATGCCTATTTGTAGGTTATCCCAAGGAAATAAGAGAATATATTGTTGAGCGACTTGAGGGAGCAAAATCTGTGCTGCAACAAAGCAAGAAGGAGAGCCATTTT
AATGAACTGAATTCAGTTAAGCTATTCTCCGATTTAAGGAGCAAGGAGAGCCATCCACGTGTCTAG
Protein sequenceShow/hide protein sequence
MVRSMISYAQLPNSFWDYSVKIVVYILNVVPSKSVFETPFELWKGRKATLHHFRVLECPTFMIETNSKNLEPHCKICLFVGYPKEIREYIVERLEGAKSVLQQSKKESHF
NELNSVKLFSDLRSKESHPRV