; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022768 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022768
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:37538872..37540867
RNA-Seq ExpressionLag0022768
SyntenyLag0022768
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.3e-1527.1Show/hide
Query:  DSTVVREFYANIDKEDGFQAIVRGVEVDWSPSAINAL---------GTVAAVKIEKRTFQ--------------SAYLKRE----------ANTWMGFIS
        ++T+V+EFY+NI + +    +VRG+ + ++P+AIN            T  A +++  T+Q                 LKR+             W  F+ 
Subjt:  DSTVVREFYANIDKEDGFQAIVRGVEVDWSPSAINAL---------GTVAAVKIEKRTFQ--------------SAYLKRE----------ANTWMGFIS

Query:  ERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQLTQEAR-----
         +++PT+H++TVS +++LL  +IL   +ID+G+IIV     C K++   L FPN IT LC++  V E   D IL     ++   +      +EA+     
Subjt:  ERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQLTQEAR-----

Query:  -------QGGLVYSINTIFEQLALSASRQEFAE--RQALTFWNYVKSRDASLKKALQENFSK
                   V + +T  EQ A+  + Q   +   + + ++ Y K RDA L  AL E+  +
Subjt:  -------QGGLVYSINTIFEQLALSASRQEFAE--RQALTFWNYVKSRDASLKKALQENFSK

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.1e-1735.47Show/hide
Query:  RDFCLREDSTV---VREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKR
        + FC   +  +   VREFYAN+         VRGV+V WS  AINA                          L TVA    E   + Q AY      L  
Subjt:  RDFCLREDSTV---VREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKR

Query:  EANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQL
         A  W  F+   +LPT H  TVS++++LL  ++L   SI+VGR+I +EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR  +
Subjt:  EANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQL

Query:  TQE
        TQE
Subjt:  TQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.0e-2432.16Show/hide
Query:  RDFCLREDSTV---VREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKR
        + FC   +  +   VREFYAN+   +     VRGV+V WS  AINA                          L TVAA   E   + Q AY      L  
Subjt:  RDFCLREDSTV---VREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKR

Query:  EANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARF--
         A  W  F+  R+LPT H  TVS++++LL  ++L   SI+VGR+I +EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR   
Subjt:  EANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARF--

Query:  ----QLTQE------------ARQGGLVYSINTIFEQLALSASRQ-------EFAERQALTFWNYVKSRDASLKKALQENFSK
            + TQ+               G ++  +  + ++L+    +Q       +   +Q   FW Y K RD +LKKALQ NF++
Subjt:  ----QLTQE------------ARQGGLVYSINTIFEQLALSASRQ-------EFAERQALTFWNYVKSRDASLKKALQENFSK

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.9e-1834.07Show/hide
Query:  ANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARF---
        A  W  F+  R+LPT H  TVS++++LL +++L   SI+VGR+I +EI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID   +AR    
Subjt:  ANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARF---

Query:  ---QLTQE------------ARQGGLVYSINTIFEQLALSASRQ-------EFAERQALTFWNYVKSRDASLKKALQENFSK
           +LTQ+               G ++  +  + ++L+    +Q       +   +Q   FW Y K RD +LKKALQ NF++
Subjt:  ---QLTQE------------ARQGGLVYSINTIFEQLALSASRQ-------EFAERQALTFWNYVKSRDASLKKALQENFSK

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.7e-2434.72Show/hide
Query:  VVREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKREANTWMGFISERM
        +VREFYAN+   +     VRGV+V WS  AINA                          L TVAA   E   + Q AY      L   A  W  F+  R+
Subjt:  VVREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKREANTWMGFISERM

Query:  LPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQLTQEA---------
        LPT H   VS++++LL  ++L   SI+VGR+I +EI  C  +K G LFFP+ IT LC+ A    NE    L + G ID   +AR  +TQE          
Subjt:  LPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQLTQEA---------

Query:  -----------RQGGLVYSINTIFEQLALSASRQEFAERQALTFWNYVKSRDASLKKALQENFSK
                     G ++  +  + ++L    S+QE   +Q   FW Y K RD +LKKALQ NF++
Subjt:  -----------RQGGLVYSINTIFEQLALSASRQEFAERQALTFWNYVKSRDASLKKALQENFSK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.3e-1835.47Show/hide
Query:  RDFCLREDSTV---VREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKR
        + FC   +  +   VREFYAN+         VRGV+V WS  AINA                          L TVA    E   + Q AY      L  
Subjt:  RDFCLREDSTV---VREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKR

Query:  EANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQL
         A  W  F+   +LPT H  TVS++++LL  ++L   SI+VGR+I +EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR  +
Subjt:  EANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQL

Query:  TQE
        TQE
Subjt:  TQE

A0A2P5BCG4 Uncharacterized protein (Fragment)9.9e-2532.16Show/hide
Query:  RDFCLREDSTV---VREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKR
        + FC   +  +   VREFYAN+   +     VRGV+V WS  AINA                          L TVAA   E   + Q AY      L  
Subjt:  RDFCLREDSTV---VREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKR

Query:  EANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARF--
         A  W  F+  R+LPT H  TVS++++LL  ++L   SI+VGR+I +EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR   
Subjt:  EANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARF--

Query:  ----QLTQE------------ARQGGLVYSINTIFEQLALSASRQ-------EFAERQALTFWNYVKSRDASLKKALQENFSK
            + TQ+               G ++  +  + ++L+    +Q       +   +Q   FW Y K RD +LKKALQ NF++
Subjt:  ----QLTQE------------ARQGGLVYSINTIFEQLALSASRQ-------EFAERQALTFWNYVKSRDASLKKALQENFSK

A0A2P5CEY2 Uncharacterized protein2.4e-1834.07Show/hide
Query:  ANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARF---
        A  W  F+  R+LPT H  TVS++++LL +++L   SI+VGR+I +EI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID   +AR    
Subjt:  ANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARF---

Query:  ---QLTQE------------ARQGGLVYSINTIFEQLALSASRQ-------EFAERQALTFWNYVKSRDASLKKALQENFSK
           +LTQ+               G ++  +  + ++L+    +Q       +   +Q   FW Y K RD +LKKALQ NF++
Subjt:  ---QLTQE------------ARQGGLVYSINTIFEQLALSASRQ-------EFAERQALTFWNYVKSRDASLKKALQENFSK

A0A2P5DXM3 Uncharacterized protein1.3e-2434.72Show/hide
Query:  VVREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKREANTWMGFISERM
        +VREFYAN+   +     VRGV+V WS  AINA                          L TVAA   E   + Q AY      L   A  W  F+  R+
Subjt:  VVREFYANIDKEDGFQAIVRGVEVDWSPSAINA--------------------------LGTVAAVKIE-KRTFQSAY------LKREANTWMGFISERM

Query:  LPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQLTQEA---------
        LPT H   VS++++LL  ++L   SI+VGR+I +EI  C  +K G LFFP+ IT LC+ A    NE    L + G ID   +AR  +TQE          
Subjt:  LPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQLTQEA---------

Query:  -----------RQGGLVYSINTIFEQLALSASRQEFAERQALTFWNYVKSRDASLKKALQENFSK
                     G ++  +  + ++L    S+QE   +Q   FW Y K RD +LKKALQ NF++
Subjt:  -----------RQGGLVYSINTIFEQLALSASRQEFAERQALTFWNYVKSRDASLKKALQENFSK

A0A6A2ZUE4 Uncharacterized protein6.4e-1627.1Show/hide
Query:  DSTVVREFYANIDKEDGFQAIVRGVEVDWSPSAINAL---------GTVAAVKIEKRTFQ--------------SAYLKRE----------ANTWMGFIS
        ++T+V+EFY+NI + +    +VRG+ + ++P+AIN            T  A +++  T+Q                 LKR+             W  F+ 
Subjt:  DSTVVREFYANIDKEDGFQAIVRGVEVDWSPSAINAL---------GTVAAVKIEKRTFQ--------------SAYLKRE----------ANTWMGFIS

Query:  ERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQLTQEAR-----
         +++PT+H++TVS +++LL  +IL   +ID+G+IIV     C K++   L FPN IT LC++  V E   D IL     ++   +      +EA+     
Subjt:  ERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTPNLARFQLTQEAR-----

Query:  -------QGGLVYSINTIFEQLALSASRQEFAE--RQALTFWNYVKSRDASLKKALQENFSK
                   V + +T  EQ A+  + Q   +   + + ++ Y K RDA L  AL E+  +
Subjt:  -------QGGLVYSINTIFEQLALSASRQEFAE--RQALTFWNYVKSRDASLKKALQENFSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTGTCTGTCACCCCTGAGATACGGAGAAAAATCAAGAATGAGGAAAATCAAAAGAAGCAGAC
TGAGGAGGTGAGAGAAGAGCAGGCAGAGGTTGTGCCTGAAAAAGATAATGAACAGGAGCAAGAGGGTCGTGTTGGGGTCATCATGCCGGAGGTGCTTAGACGTCGCCGCA
TAAAGCGAAAGGCTGGGTGCGTCCAGGTGGTCCGAACTGACACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAAAGAGAAGAACAAGAGAAAAAAGAG
GTCGAGGAAAGAGTAAGAGAAGAAACAGAGAAGAAAGCTGAGGAAGAACGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAACAGCCTGA
TGAGATAGAAGAGCCACAATTACCGTATGATCGCTTCGTCCGCAATTCTGCTAGAGCAAAATATGTTGAGCTGCTGAAAAGAGACTTCTGTTTAAGAGAGGATTCAACAG
TGGTGCGTGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGCGATTGTTCGAGGAGTCGAGGTCGACTGGAGTCCTAGTGCTATTAACGCACTGGGCACGGTG
GCAGCTGTCAAAATAGAGAAAAGGACATTTCAGTCAGCTTATCTGAAGAGGGAAGCAAATACATGGATGGGATTTATCAGTGAGAGGATGCTTCCAACGAATCATGACTC
GACGGTCTCTAGGGAACAGGTTCTTCTGACTTTTGCGATTTTGCGGTCTCTCAGCATTGATGTAGGAAGGATTATTGTCAATGAGATATCTGGTTGTTGGAAGAAGAAGG
TGGGGAAGCTGTTTTTCCCGAATAATATCACAATGCTTTGCAAGCGAGCAGGGGTTCCAGAGAATGAAGGAGATGTGATTTTATTTGACAAGGGAATCATCGACACGCCT
AACTTGGCGCGGTTTCAGCTTACGCAAGAGGCACGTCAAGGTGGACTTGTCTACAGCATCAACACAATTTTTGAACAACTGGCACTTTCAGCCAGCAGGCAGGAGTTTGC
CGAAAGGCAAGCTTTAACCTTCTGGAACTATGTTAAGAGTCGTGATGCCAGTCTGAAGAAGGCGCTGCAGGAGAATTTTTCCAAGTCCTATAATGCGATATCAGAGTTAA
TCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAAGCTAGCGTCGAGACGCTAGCTCTTGAGCGT
CTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTATGATAGGAAGCGTTCCGACGCTACCGTTTTTCCTTATTCAGAACCGCGTTT
AAGAGGCAGCGTCGCGACGCTGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTGTCTGTCACCCCTGAGATACGGAGAAAAATCAAGAATGAGGAAAATCAAAAGAAGCAGAC
TGAGGAGGTGAGAGAAGAGCAGGCAGAGGTTGTGCCTGAAAAAGATAATGAACAGGAGCAAGAGGGTCGTGTTGGGGTCATCATGCCGGAGGTGCTTAGACGTCGCCGCA
TAAAGCGAAAGGCTGGGTGCGTCCAGGTGGTCCGAACTGACACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAAAGAGAAGAACAAGAGAAAAAAGAG
GTCGAGGAAAGAGTAAGAGAAGAAACAGAGAAGAAAGCTGAGGAAGAACGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAACAGCCTGA
TGAGATAGAAGAGCCACAATTACCGTATGATCGCTTCGTCCGCAATTCTGCTAGAGCAAAATATGTTGAGCTGCTGAAAAGAGACTTCTGTTTAAGAGAGGATTCAACAG
TGGTGCGTGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGCGATTGTTCGAGGAGTCGAGGTCGACTGGAGTCCTAGTGCTATTAACGCACTGGGCACGGTG
GCAGCTGTCAAAATAGAGAAAAGGACATTTCAGTCAGCTTATCTGAAGAGGGAAGCAAATACATGGATGGGATTTATCAGTGAGAGGATGCTTCCAACGAATCATGACTC
GACGGTCTCTAGGGAACAGGTTCTTCTGACTTTTGCGATTTTGCGGTCTCTCAGCATTGATGTAGGAAGGATTATTGTCAATGAGATATCTGGTTGTTGGAAGAAGAAGG
TGGGGAAGCTGTTTTTCCCGAATAATATCACAATGCTTTGCAAGCGAGCAGGGGTTCCAGAGAATGAAGGAGATGTGATTTTATTTGACAAGGGAATCATCGACACGCCT
AACTTGGCGCGGTTTCAGCTTACGCAAGAGGCACGTCAAGGTGGACTTGTCTACAGCATCAACACAATTTTTGAACAACTGGCACTTTCAGCCAGCAGGCAGGAGTTTGC
CGAAAGGCAAGCTTTAACCTTCTGGAACTATGTTAAGAGTCGTGATGCCAGTCTGAAGAAGGCGCTGCAGGAGAATTTTTCCAAGTCCTATAATGCGATATCAGAGTTAA
TCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAAGCTAGCGTCGAGACGCTAGCTCTTGAGCGT
CTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAGCGTCGAGACGCTATGATAGGAAGCGTTCCGACGCTACCGTTTTTCCTTATTCAGAACCGCGTTT
AAGAGGCAGCGTCGCGACGCTGTCTTGA
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEVSVTPEIRRKIKNEENQKKQTEEVREEQAEVVPEKDNEQEQEGRVGVIMPEVLRRRRIKRKAGCVQVVRTDTPSPPSSDSEKEKAEREEQEKKE
VEERVREETEKKAEEERLLKRRAEKGKSVAEASEQPDEIEEPQLPYDRFVRNSARAKYVELLKRDFCLREDSTVVREFYANIDKEDGFQAIVRGVEVDWSPSAINALGTV
AAVKIEKRTFQSAYLKREANTWMGFISERMLPTNHDSTVSREQVLLTFAILRSLSIDVGRIIVNEISGCWKKKVGKLFFPNNITMLCKRAGVPENEGDVILFDKGIIDTP
NLARFQLTQEARQGGLVYSINTIFEQLALSASRQEFAERQALTFWNYVKSRDASLKKALQENFSKSYNAISELIGCSGREKMQRNEKSKSGEKSNLGQQQASVETLALER
LDAHIPYQIRRVKLTASRRYDRKRSDATVFPYSEPRLRGSVATLS