; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022776 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022776
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr7:37780401..37781849
RNA-Seq ExpressionLag0022776
SyntenyLag0022776
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061039.1 hypothetical protein E6C27_scaffold501G001750 [Cucumis melo var. makuwa]8.2e-6683.33Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYK----VYTDGRPNISTHGRKATIKDFY
        SSC DSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ AP FLF MQW+D SC CILPRYLNFFHILVYK    VYTDGRPNIS HGRKAT+KDFY
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYK----VYTDGRPNISTHGRKATIKDFY

Query:  VVILSSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         VIL SLQRLQANVE+ DNAKEK  KSDNSSERR+QGDG LSNGDLERED CGICL
Subjt:  VVILSSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

XP_008444404.1 PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo]1.5e-6785.53Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SSC DSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ AP FLF MQW+D SC CILPRYLNFFHILVYKVYTDGRPNIS HGRKAT+KDFY VIL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQRLQANVE+ DNAKEK  KSDNSSERR+QGDG LSNGDLERED CGICL
Subjt:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

XP_022962105.1 E3 ubiquitin-protein ligase CHFR-like isoform X1 [Cucurbita moschata]4.8e-6684.21Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SSCKDSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ APL LF MQWVD SC CILPRYLNFFHILVYKVYTDGRPNIS HGRKAT+K+FY +IL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQRLQA+ E+LDNAK K VKSDNSSERRV+GDG  SNGDLERED CGICL
Subjt:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

XP_022962108.1 uncharacterized protein LOC111462660 isoform X2 [Cucurbita moschata]4.8e-6684.21Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SSCKDSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ APL LF MQWVD SC CILPRYLNFFHILVYKVYTDGRPNIS HGRKAT+K+FY +IL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQRLQA+ E+LDNAK K VKSDNSSERRV+GDG  SNGDLERED CGICL
Subjt:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

XP_023546493.1 E3 ubiquitin-protein ligase CHFR-like [Cucurbita pepo subsp. pepo]1.4e-6583.55Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SSCKDSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ APL LF MQWVD SC CILPRYLNFFHILVYKVYTDGRPNIS HGRKAT+K+FY +IL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQRLQA+ E+LDNAK K VKSDNS+ERRV+GDG  SNGDLERED CGICL
Subjt:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

TrEMBL top hitse value%identityAlignment
A0A1S3BB06 uncharacterized protein LOC1034877417.2e-6885.53Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SSC DSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ AP FLF MQW+D SC CILPRYLNFFHILVYKVYTDGRPNIS HGRKAT+KDFY VIL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQRLQANVE+ DNAKEK  KSDNSSERR+QGDG LSNGDLERED CGICL
Subjt:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

A0A5A7V5Q1 RING-type domain-containing protein4.0e-6683.33Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYK----VYTDGRPNISTHGRKATIKDFY
        SSC DSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ AP FLF MQW+D SC CILPRYLNFFHILVYK    VYTDGRPNIS HGRKAT+KDFY
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYK----VYTDGRPNISTHGRKATIKDFY

Query:  VVILSSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         VIL SLQRLQANVE+ DNAKEK  KSDNSSERR+QGDG LSNGDLERED CGICL
Subjt:  VVILSSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

A0A6J1HBV1 E3 ubiquitin-protein ligase CHFR-like isoform X12.3e-6684.21Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SSCKDSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ APL LF MQWVD SC CILPRYLNFFHILVYKVYTDGRPNIS HGRKAT+K+FY +IL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQRLQA+ E+LDNAK K VKSDNSSERRV+GDG  SNGDLERED CGICL
Subjt:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

A0A6J1HDV0 uncharacterized protein LOC111462660 isoform X22.3e-6684.21Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SSCKDSLK+LEEDV RANAL  AIPRAKHGSYLQMKLVYNQ APL LF MQWVD SC CILPRYLNFFHILVYKVYTDGRPNIS HGRKAT+K+FY +IL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQRLQA+ E+LDNAK K VKSDNSSERRV+GDG  SNGDLERED CGICL
Subjt:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

B7SHK9 RING-type domain-containing protein8.8e-6682.24Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SSC DSLK+LEEDV RAN L  AIPRAKHGSYLQMKLVYNQ AP FLF MQW+D SC CILPRYLNFFHILVYKVYTDGRPNIS HGRKAT+KDFY VIL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQRLQA++E+ D+AK+K  KSDNSSERR+QGDG LSNGDLERED CGICL
Subjt:  SSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

SwissProt top hitse value%identityAlignment
Q9FM67 Protein TIC 20-v, chloroplastic1.9e-0455Show/hide
Query:  RRPILTVRSSGDNNNNSADGPDRLISAICHFYPFFDDIQY
        R   L ++S GD   +S D  DR+ISA+C+FYPFFD IQY
Subjt:  RRPILTVRSSGDNNNNSADGPDRLISAICHFYPFFDDIQY

Q9M022 E3 ubiquitin-protein ligase AIRP26.1e-2440.4Show/hide
Query:  SCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILS
        S KDSLK LE D+  AN L    P    G Y+QM+L Y+  A LFLF +QW D    C     L    IL+YK Y DG+  +S H RK +I++FY V+  
Subjt:  SCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILS

Query:  SLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
        SL +L   +  ++  K+K +      ++     G +S  DLERE+ CGICL
Subjt:  SLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

Arabidopsis top hitse value%identityAlignment
AT1G13195.1 RING/U-box superfamily protein8.5e-3751.28Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SS  +SLK+LE DV  AN+L  AIP  K+   LQMKLV++ FA L LF ++W+D S  C++PRYLN FH+LVYKV +DG+P ++THGRKATI +FY VIL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQLDNA----KEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SLQ L +N+++L+        KR+    + E R       SN  LERE+ CGICL
Subjt:  SSLQRLQANVEQLDNA----KEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

AT1G13195.2 RING/U-box superfamily protein6.5e-2950.39Show/hide
Query:  KHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILSSLQRLQANVEQLDNA----KEKRVKS
        K+   LQMKLV++ FA L LF ++W+D S  C++PRYLN FH+LVYKV +DG+P ++THGRKATI +FY VIL SLQ L +N+++L+        KR+  
Subjt:  KHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILSSLQRLQANVEQLDNA----KEKRVKS

Query:  DNSSERRVQGDGTLSNGDLEREDGCGICL
          + E R       SN  LERE+ CGICL
Subjt:  DNSSERRVQGDGTLSNGDLEREDGCGICL

AT1G24440.1 RING/U-box superfamily protein1.6e-3551.95Show/hide
Query:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL
        SS +DSLKILE D+  AN L   IP  K G  LQMKLV +  AP F+F +QW+DFS  C+LPRY +FFHIL+YKV  DGR N S +GRKATI++FY VIL
Subjt:  SSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVIL

Query:  SSLQRLQANVEQL--DNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
         SL+RL  N   L  ++      K+    +  ++G   +++ DLERED CGICL
Subjt:  SSLQRLQANVEQL--DNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

AT5G01520.2 RING/U-box superfamily protein4.4e-2540.4Show/hide
Query:  SCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILS
        S KDSLK LE D+  AN L    P    G Y+QM+L Y+  A LFLF +QW D    C     L    IL+YK Y DG+  +S H RK +I++FY V+  
Subjt:  SCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILS

Query:  SLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
        SL +L   +  ++  K+K +      ++     G +S  DLERE+ CGICL
Subjt:  SLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL

AT5G58787.1 RING/U-box superfamily protein6.7e-2641.06Show/hide
Query:  SCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILS
        S KDSLK LE D+  AN L +  PR K G+ +QM+L Y+  A  FLF +QW D    C L  +L    +L+Y  Y DG+  +S + RKA+I++F  VIL 
Subjt:  SCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLFLFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILS

Query:  SLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL
        SL +LQ  V  +D++K+K V        R + +  +S  ++ERE+ CGIC+
Subjt:  SLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTCCTACTCTCTCAAACCCTAGCAGAAGAATCCTCACATCCCAAATCCACTTCAAAACTCGACGACGACCAATCCTCACCGTCCGATCCTCCGGCGACAACAA
CAACAACTCCGCCGACGGCCCCGACCGCCTCATCTCCGCCATCTGCCACTTCTACCCCTTCTTCGACGACATCCAGTACGACAGTTCTTGTAAGGATTCTCTGAAAATCC
TCGAAGAAGATGTAAATCGTGCCAATGCTCTGCCTGTTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAATCAATTTGCTCCACTCTTT
CTATTTTTTATGCAATGGGTGGATTTTTCATGCATTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGTTTACACAGATGGAAGGCCTAATAT
ATCAACACATGGAAGAAAGGCAACTATCAAAGATTTCTATGTTGTCATATTGTCATCCCTTCAACGGCTCCAAGCGAACGTCGAACAGTTGGATAATGCTAAAGAGAAGC
GTGTCAAGTCTGATAATTCTAGTGAGAGAAGAGTCCAAGGAGATGGAACACTCTCCAATGGTGATTTAGAGAGAGAAGATGGGTGTGGGATTTGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTCCTACTCTCTCAAACCCTAGCAGAAGAATCCTCACATCCCAAATCCACTTCAAAACTCGACGACGACCAATCCTCACCGTCCGATCCTCCGGCGACAACAA
CAACAACTCCGCCGACGGCCCCGACCGCCTCATCTCCGCCATCTGCCACTTCTACCCCTTCTTCGACGACATCCAGTACGACAGTTCTTGTAAGGATTCTCTGAAAATCC
TCGAAGAAGATGTAAATCGTGCCAATGCTCTGCCTGTTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAATCAATTTGCTCCACTCTTT
CTATTTTTTATGCAATGGGTGGATTTTTCATGCATTTGTATACTTCCCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGTTTACACAGATGGAAGGCCTAATAT
ATCAACACATGGAAGAAAGGCAACTATCAAAGATTTCTATGTTGTCATATTGTCATCCCTTCAACGGCTCCAAGCGAACGTCGAACAGTTGGATAATGCTAAAGAGAAGC
GTGTCAAGTCTGATAATTCTAGTGAGAGAAGAGTCCAAGGAGATGGAACACTCTCCAATGGTGATTTAGAGAGAGAAGATGGGTGTGGGATTTGCTTATAA
Protein sequenceShow/hide protein sequence
MPFPTLSNPSRRILTSQIHFKTRRRPILTVRSSGDNNNNSADGPDRLISAICHFYPFFDDIQYDSSCKDSLKILEEDVNRANALPVAIPRAKHGSYLQMKLVYNQFAPLF
LFFMQWVDFSCICILPRYLNFFHILVYKVYTDGRPNISTHGRKATIKDFYVVILSSLQRLQANVEQLDNAKEKRVKSDNSSERRVQGDGTLSNGDLEREDGCGICL