; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022783 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022783
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr7:37928488..37928922
RNA-Seq ExpressionLag0022783
SyntenyLag0022783
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW16209.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.7e-3046.9Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +V++ ETK+E+ +++ V S+W  R  DW  L +SGA GG L++WDS++++  EVV G FSVS+ F        W+S VYGP  P  ++ FW EL D+YGL
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP
           LWCV GDFNVIR  S    G  +T SM+ F+ FI  C L+DP
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP

RVW91468.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.7e-3046.9Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +V++ ETK+E+ +++ V S+W  R  DW  L +SGA GG L++WDS++++  EVV G FSVS+ F        W+S VYGP  P  ++ FW EL D+YGL
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP
           LWCV GDFNVIR  S    G  +T SM+ F+ FI  C L+DP
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP

RVW93866.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.3e-3046.9Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +V++ ETK+E+ +++ V S+W  R  DW  L +SGA GG L++WDS++++  EVV G FSVS+ F        W+S VYGP  P  ++ FW EL D+YGL
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP
           LWCV GDFNVIR  S    G  +T SM+ F+ FI  C L+DP
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]4.4e-3144.83Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +V+  ETK E  ++  +RS+W  R+  W +L S+G  GG L++WD RV++  EVV G FS+SI FR++D+   W++ VYGP RP  ++ +W+ELG L+GL
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP
        C   WCV  DFNV+R  S   +G    +SM+ F+ FI  C L+DP
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP

XP_028093340.1 uncharacterized protein LOC114293463 [Camellia sinensis]4.4e-3143.75Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +V+  ETK E  ++  +RS+W  R+  W +L S+G  GG L++WD RV++  EVV G FS+SI+FR++D+ + W++ VYGP +P  ++ +W+EL  L+GL
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVD
        C   WCV GDFNV+R  S   +G   ++SM+ F+ FI  C L+D
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVD

TrEMBL top hitse value%identityAlignment
A0A438BYX6 Transposon TX1 uncharacterized 149 kDa protein1.8e-3046.9Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +V++ ETK+E+ +++ V S+W  R  DW  L +SGA GG L++WDS++++  EVV G FSVS+ F        W+S VYGP  P  ++ FW EL D+YGL
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP
           LWCV GDFNVIR  S    G  +T SM+ F+ FI  C L+DP
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP

A0A438I435 Transposon TX1 uncharacterized 149 kDa protein1.8e-3046.9Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +V++ ETK+E+ +++ V S+W  R  DW  L +SGA GG L++WDS++++  EVV G FSVS+ F        W+S VYGP  P  ++ FW EL D+YGL
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP
           LWCV GDFNVIR  S    G  +T SM+ F+ FI  C L+DP
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP

A0A438IAX3 Transposon TX1 uncharacterized 149 kDa protein3.0e-3046.9Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +V++ ETK+E+ +++ V S+W  R  DW  L +SGA GG L++WDS++++  EVV G FSVS+ F        W+S VYGP  P  ++ FW EL D+YGL
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP
           LWCV GDFNVIR  S    G  +T SM+ F+ FI  C L+DP
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP

M5VS59 Reverse transcriptase domain-containing protein (Fragment)2.3e-3045.89Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +VILLETK+E V++Q V  +W +R+ +W    S G  GG  +LW+S+ +++ + + G FSVSI          W+S +YGP R + +  FWEEL DLYG 
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDPS
        CG  WC+ GDFNV+R  +  S+  RVTKSM+ FNDFI+   L DP+
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDPS

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)1.0e-3046.21Show/hide
Query:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL
        +VILLETK+E V++Q V  +W +R+ +W    S G  GG  +LW+S+ +++ + + G FSVSI          W+S +YGP R + +  FWEEL DLYG 
Subjt:  MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGL

Query:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP
        CG +WC+ GDFNV+R  +  S+  RVTKSM+ FNDFI+   L DP
Subjt:  CGSLWCVAGDFNVIR--SPLSSGWRVTKSMKVFNDFIEGCCLVDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATTTTACTGGAAACTAAAAGAGAGCATGTCAATCAACAACCAGTGAGAAGTCTATGGGATAATAGGTATGTGGATTGGGAGATTCTTGAGTCCTCAGGGGCCTT
GGGAGGCTTCTTGCTTCTTTGGGATAGCAGGGTGATTAACTTGACAGAGGTGGTCAAGGGGTGCTTTTCGGTGTCCATATCCTTTCGGTCTAAAGATGATGATTTGAGGT
GGGTGTCAAGGGTGTATGGTCCTCGTAGGCCGAAAGGTAAAAGGCCTTTTTGGGAAGAGTTGGGGGATCTCTATGGCCTTTGTGGCTCGTTGTGGTGTGTGGCCGGAGAC
TTCAATGTCATCCGTTCTCCTTTATCTTCGGGATGGAGGGTGACCAAATCCATGAAAGTGTTTAATGACTTCATCGAGGGTTGTTGCCTAGTTGATCCCTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATTTTACTGGAAACTAAAAGAGAGCATGTCAATCAACAACCAGTGAGAAGTCTATGGGATAATAGGTATGTGGATTGGGAGATTCTTGAGTCCTCAGGGGCCTT
GGGAGGCTTCTTGCTTCTTTGGGATAGCAGGGTGATTAACTTGACAGAGGTGGTCAAGGGGTGCTTTTCGGTGTCCATATCCTTTCGGTCTAAAGATGATGATTTGAGGT
GGGTGTCAAGGGTGTATGGTCCTCGTAGGCCGAAAGGTAAAAGGCCTTTTTGGGAAGAGTTGGGGGATCTCTATGGCCTTTGTGGCTCGTTGTGGTGTGTGGCCGGAGAC
TTCAATGTCATCCGTTCTCCTTTATCTTCGGGATGGAGGGTGACCAAATCCATGAAAGTGTTTAATGACTTCATCGAGGGTTGTTGCCTAGTTGATCCCTCCTGA
Protein sequenceShow/hide protein sequence
MVILLETKREHVNQQPVRSLWDNRYVDWEILESSGALGGFLLLWDSRVINLTEVVKGCFSVSISFRSKDDDLRWVSRVYGPRRPKGKRPFWEELGDLYGLCGSLWCVAGD
FNVIRSPLSSGWRVTKSMKVFNDFIEGCCLVDPS