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Lag0022795 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022795
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr7:38070188..38071336
RNA-Seq ExpressionLag0022795
SyntenyLag0022795
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032935.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.1e-0669.57Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQ  +STSTR SAF+RLS+STSKK +PSTS FDRL +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
KAA0050345.1 gag protease polyprotein [Cucumis melo var. makuwa]1.4e-0569.57Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQY  ST TR SAF+RLS+STSKK +PSTS FDRL +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
KAA0051327.1 Retrotransposon gag protein [Cucumis melo var. makuwa]6.8e-0565.22Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQ   STSTR SAF+RL++STSKK +PSTS+FD L +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
KAA0062746.1 Retrotransposon gag protein [Cucumis melo var. makuwa]4.0e-0567.39Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQ L STST+ SAF+RLS+STSKK +PS S FDRL +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
TYJ99972.1 hypothetical protein E5676_scaffold360G00130 [Cucumis melo var. makuwa]5.2e-0569.57Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQ    TSTR SAF+RLS+ST KK QPSTSVFDRL +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
TrEMBL top hitse value%identityAlignment
A0A5A7U9R6 Gag protease polyprotein6.6e-0669.57Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQY  ST TR SAF+RLS+STSKK +PSTS FDRL +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
A0A5A7UA77 Retrotransposon gag protein3.3e-0565.22Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQ   STSTR SAF+RL++STSKK +PSTS+FD L +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
A0A5A7V8H3 Retrotransposon gag protein1.9e-0567.39Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQ L STST+ SAF+RLS+STSKK +PS S FDRL +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
A0A5D3BJM6 Uncharacterized protein2.5e-0569.57Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQ    TSTR SAF+RLS+ST KK QPSTSVFDRL +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
A0A5D3DEC3 Retrotransposon gag protein3.0e-0669.57Show/hide
Query:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
        +SMA  EEENQ  +STSTR SAF+RLS+STSKK +PSTS FDRL +
Subjt:  MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATATTTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
AACATCTGTCTTTGATCGCCTCAATGTGGTTCTCTCCGTTGTTGCTCCGCTGAGGTTCTCCTTCTCCAAGTTCGAAGGTCGACAGTTGACGGCTTCGAACTCGATCCATC
TTCAAAGGTTGGCGGTTGACGGCTTCGATCGAACTCGATCCATCTTCAAAGGTTGGCTGGTTGACGGCTTCGGCCTCGCTCCATCTTCAAAGGTTGGCGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATATTTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
AACATCTGTCTTTGATCGCCTCAATGTGGTTCTCTCCGTTGTTGCTCCGCTGAGGTTCTCCTTCTCCAAGTTCGAAGGTCGACAGTTGACGGCTTCGAACTCGATCCATC
TTCAAAGGTTGGCGGTTGACGGCTTCGATCGAACTCGATCCATCTTCAAAGGTTGGCTGGTTGACGGCTTCGGCCTCGCTCCATCTTCAAAGGTTGGCGGTTGA
Protein sequenceShow/hide protein sequence
MSMAATEEENQYLVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLNVVLSVVAPLRFSFSKFEGRQLTASNSIHLQRLAVDGFDRTRSIFKGWLVDGFGLAPSSKVGG