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Lag0022797 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022797
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr7:38097558..38098181
RNA-Seq ExpressionLag0022797
SyntenyLag0022797
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3440753.1 hypothetical protein FNV43_RR19039 [Rhamnella rubrinervis]1.9e-1338.1Show/hide
Query:  ENDDEQQDQISNIVQGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNV
        E D E++  + +I+      +  Q   GI+ VVEQF++ HPP F+  ST+ +V E WI   EK F  ++C + QKV CA++MLK+ A+ WW++ +R +N+
Subjt:  ENDDEQQDQISNIVQGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNV

Query:  PNNPL
          +P+
Subjt:  PNNPL

XP_015896950.1 uncharacterized protein LOC107430602 [Ziziphus jujuba]1.1e-1339.29Show/hide
Query:  DQISNIVQGERTIRQAQTDDGINRVV--EQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNVPNNPL
        + I+ I+Q      QAQ    I + +  ++F +L PP+F +  TDP+VAE+WI E+EK F++ +C++  KV CA +ML++ A  WW  TRRT NV  NP+
Subjt:  DQISNIVQGERTIRQAQTDDGINRVV--EQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNVPNNPL

Query:  SKHEYNLASLTS
           ++    L S
Subjt:  SKHEYNLASLTS

XP_022155935.1 uncharacterized protein LOC111022935 [Momordica charantia]6.6e-1441.53Show/hide
Query:  RRAANRRGENDDEQQDQISNIVQGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWN
        +R  N R    DE QD I  + Q ++T R A  +D +NRVVEQFR LHPPSFD                              VACA YMLK G NKWWN
Subjt:  RRAANRRGENDDEQQDQISNIVQGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWN

Query:  LTRRTWNVPNNPLSKHEY
        +TR+TWN+  NP+    +
Subjt:  LTRRTWNVPNNPLSKHEY

XP_022158216.1 uncharacterized protein LOC111024753 [Momordica charantia]5.6e-1363.93Show/hide
Query:  QGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQK
        Q  RT R A  +D +N + +QFRKLHPPSFD  STD IVAE+WIEEIE  FDF++CNDRQ+
Subjt:  QGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQK

XP_022859185.1 uncharacterized protein LOC111379977 [Olea europaea var. sylvestris]1.9e-1345.71Show/hide
Query:  GINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRT
        G + ++EQFRKLHPP F+    DP+  E+W+  +E+ F FM+C D QK+ CA +M+++GA+ WW +T R+
Subjt:  GINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRT

TrEMBL top hitse value%identityAlignment
A0A2N9J5W4 Uncharacterized protein1.4e-0936.47Show/hide
Query:  QAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNVPNNPLS
        Q+  ++  NR + QF KL+PPSF+    D ++AEKW+  +EK F+ + C++ QKV    + L+  A  WW +T+ +  V   PL+
Subjt:  QAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNVPNNPLS

A0A2P5BAH4 Uncharacterized protein (Fragment)3.7e-1040.23Show/hide
Query:  IRQAQTDDGIN-RVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNVPNNPL
        + QA    G+   V EQFR++ P SF    TDP++ E WI+E+E  F  + C D+Q+V CA +M+K  A  WW +T    N   NP+
Subjt:  IRQAQTDDGIN-RVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNVPNNPL

A0A6J1DNX0 uncharacterized protein LOC1110229353.2e-1441.53Show/hide
Query:  RRAANRRGENDDEQQDQISNIVQGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWN
        +R  N R    DE QD I  + Q ++T R A  +D +NRVVEQFR LHPPSFD                              VACA YMLK G NKWWN
Subjt:  RRAANRRGENDDEQQDQISNIVQGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWN

Query:  LTRRTWNVPNNPLSKHEY
        +TR+TWN+  NP+    +
Subjt:  LTRRTWNVPNNPLSKHEY

A0A6J1E0B5 uncharacterized protein LOC1110247532.7e-1363.93Show/hide
Query:  QGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQK
        Q  RT R A  +D +N + +QFRKLHPPSFD  STD IVAE+WIEEIE  FDF++CNDRQ+
Subjt:  QGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQK

A0A6P4B4I6 uncharacterized protein LOC1074306025.5e-1439.29Show/hide
Query:  DQISNIVQGERTIRQAQTDDGINRVV--EQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNVPNNPL
        + I+ I+Q      QAQ    I + +  ++F +L PP+F +  TDP+VAE+WI E+EK F++ +C++  KV CA +ML++ A  WW  TRRT NV  NP+
Subjt:  DQISNIVQGERTIRQAQTDDGINRVV--EQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRTWNVPNNPL

Query:  SKHEYNLASLTS
           ++    L S
Subjt:  SKHEYNLASLTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAATGCCACCCGAAGAGCAGCTAACCGTAGAGGTGAAAATGATGATGAGCAGCAAGACCAAATTTCAAACATTGTGCAAGGCGAAAGGACCATCAGGCAAGCCCA
AACCGATGATGGAATAAATCGTGTGGTGGAGCAGTTCAGGAAGCTTCATCCACCCTCTTTTGATGTAACAAGCACAGACCCCATAGTTGCTGAAAAGTGGATTGAGGAAA
TAGAAAAAGCATTTGACTTCATGGATTGCAATGATCGGCAAAAGGTGGCTTGTGCTGCTTATATGCTGAAAAGGGGAGCAAACAAATGGTGGAACTTAACAAGAAGGACG
TGGAATGTGCCTAATAACCCATTGAGTAAACATGAGTATAACTTAGCATCACTTACTTCTTCCCTTAAAATTGGAAGTGTTGGGTTTTGTGCCCTAAAACTCGTAGATAG
TGAATGTAACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAATGCCACCCGAAGAGCAGCTAACCGTAGAGGTGAAAATGATGATGAGCAGCAAGACCAAATTTCAAACATTGTGCAAGGCGAAAGGACCATCAGGCAAGCCCA
AACCGATGATGGAATAAATCGTGTGGTGGAGCAGTTCAGGAAGCTTCATCCACCCTCTTTTGATGTAACAAGCACAGACCCCATAGTTGCTGAAAAGTGGATTGAGGAAA
TAGAAAAAGCATTTGACTTCATGGATTGCAATGATCGGCAAAAGGTGGCTTGTGCTGCTTATATGCTGAAAAGGGGAGCAAACAAATGGTGGAACTTAACAAGAAGGACG
TGGAATGTGCCTAATAACCCATTGAGTAAACATGAGTATAACTTAGCATCACTTACTTCTTCCCTTAAAATTGGAAGTGTTGGGTTTTGTGCCCTAAAACTCGTAGATAG
TGAATGTAACTGTTGA
Protein sequenceShow/hide protein sequence
MNNATRRAANRRGENDDEQQDQISNIVQGERTIRQAQTDDGINRVVEQFRKLHPPSFDVTSTDPIVAEKWIEEIEKAFDFMDCNDRQKVACAAYMLKRGANKWWNLTRRT
WNVPNNPLSKHEYNLASLTSSLKIGSVGFCALKLVDSECNC