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Lag0022803 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022803
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr7:38282379..38285069
RNA-Seq ExpressionLag0022803
SyntenyLag0022803
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]6.2e-1959.21Show/hide
Query:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENA
        +  +LR++IG F+Q   E L++AWERYK+L+R+CPQHG P WLQ+Q+FYNG+N  T+TI+ AA+GGTL+SKT E A
Subjt:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENA

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.6e-2246.83Show/hide
Query:  KLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVEN---------------------------A
        +LRT+IGTF+Q  DEQL++AWERYK+LLR+CPQHGYP WLQIQLFYNG+  STK+IL A AGG++ SK  +                            A
Subjt:  KLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVEN---------------------------A

Query:  RVFEIDNVSALQAKMSTIANAFLKFS
         ++E+D V++L+A+M+++ NA  K +
Subjt:  RVFEIDNVSALQAKMSTIANAFLKFS

WP_217860865.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]7.4e-2067.12Show/hide
Query:  KLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENA
        +LRT+IGTF+Q  DEQL++AWERYK+LLR+CPQHGYP WLQIQLFYNG+  STK+IL A A G++ SK  + A
Subjt:  KLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENA

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]1.0e-2146.15Show/hide
Query:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARV----------------------
        +  +LRT+I +F++   EQLF+ WERYKELLRKCPQHG   WLQIQ+FYNG+N  T+TIL AAAGGTLLS+T ENA +                      
Subjt:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARV----------------------

Query:  ---FEIDNVSALQAKMSTIANAFLKFS-ESSNRTNKLVEAMIT
           +EID +S+L+A++  + NA  K S   ++ +N+LV A  T
Subjt:  ---FEIDNVSALQAKMSTIANAFLKFS-ESSNRTNKLVEAMIT

XP_040996048.1 uncharacterized protein LOC121242223 [Juglans microcarpa x Juglans regia]2.8e-1959.21Show/hide
Query:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENA
        ++ +LR++IG F+Q   E L+++WERYK+L+R+CPQHG P WLQ+Q+FYNG+N  T+TI+ AA+GGTL+SKTVE A
Subjt:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENA

TrEMBL top hitse value%identityAlignment
A0A1S3UJZ0 uncharacterized protein LOC1067660161.4e-1660.27Show/hide
Query:  KLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENA
        K+R +I TF QQ  E L++AWERYKEL+RKCP H  P WLQ+Q+FYNG++PS K IL AA+GG+   KT E A
Subjt:  KLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENA

A0A2I4F4C8 uncharacterized protein LOC1089953735.1e-1952.33Show/hide
Query:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARVFEIDNVSA
        +  +LR++I  F+Q   E L++AWERYK L+R CPQHG P WLQ+Q+FYNG+N  T+TI+ AAAGGTL+SKT+E A  + ++ +++
Subjt:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARVFEIDNVSA

A0A2I4G4Q3 uncharacterized protein LOC1090047126.3e-1738.84Show/hide
Query:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVEN-------------------------
        +  +LR++IG F+Q   E L++AWE YK+L+R+CPQHG P WLQ+Q+FYNG+N  T+TI+   +GGTL+ KT+E                          
Subjt:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVEN-------------------------

Query:  ARVFEIDNVSALQAKMSTIAN
        AR+ E++ ++AL A+++T+++
Subjt:  ARVFEIDNVSALQAKMSTIAN

A0A5B6WR45 Transposon Ty3-I Gag-Pol polyprotein6.3e-1758.23Show/hide
Query:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARVF
        +  KLR  I +F Q   E L+ AWERYK+LLR+CP HG P WLQ+Q FYNGVNPST+ ++ AA GGTL +KT E A  F
Subjt:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARVF

A0A6J1DU19 uncharacterized protein LOC1110243615.0e-2246.15Show/hide
Query:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARV----------------------
        +  +LRT+I +F++   EQLF+ WERYKELLRKCPQHG   WLQIQ+FYNG+N  T+TIL AAAGGTLLS+T ENA +                      
Subjt:  EVVKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARV----------------------

Query:  ---FEIDNVSALQAKMSTIANAFLKFS-ESSNRTNKLVEAMIT
           +EID +S+L+A++  + NA  K S   ++ +N+LV A  T
Subjt:  ---FEIDNVSALQAKMSTIANAFLKFS-ESSNRTNKLVEAMIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCTTGGGGCAGAAGTTGTCGCAGCGTCGGACGCTACGCAGACAGCGTCGCGACGCTATCGCGATTTTTGCACGCGCTATCTGACCACCTAGCGTTGAGACGCTA
CGGAGTAAAATTGAATGTGTTAATTGCTTCCGATCTTCAATTGATTTTGCATGTGTTATATGAACACCTTCAGATTCATGTTCGAGAAATTTCGTTGGGAGAAAAACCAA
GAGTGTACAAGTGGTCTGAGGATAGTAGAGAAGATCCAAGTGGTTATCCAAAAGTCATTCGTGTGAATTATAAAGCATCGGATTATACGAATTGGGAGCTTCAAGAGGTG
GTCAAGCTGAGGACCAAAATTGGGACATTCCAACAGCAGTTTGACGAACAGTTGTTCAAGGCATGGGAGCGTTACAAAGAGTTGTTGAGGAAGTGCCCTCAGCATGGTTA
TCCTGGCTGGTTACAAATCCAACTCTTTTATAACGGTGTAAATCCCAGTACTAAAACCATTTTGGTTGCAGCTGCAGGTGGGACTCTGTTGTCCAAGACCGTGGAAAATG
CACGAGTATTTGAAATCGACAACGTAAGTGCACTCCAAGCTAAGATGTCCACCATTGCTAATGCTTTTCTTAAGTTTTCAGAATCAAGCAATAGGACGAACAAGCTGGTG
GAGGCCATGATCACCATAAACACCACAATGACTGGCCACAGTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCTTGGGGCAGAAGTTGTCGCAGCGTCGGACGCTACGCAGACAGCGTCGCGACGCTATCGCGATTTTTGCACGCGCTATCTGACCACCTAGCGTTGAGACGCTA
CGGAGTAAAATTGAATGTGTTAATTGCTTCCGATCTTCAATTGATTTTGCATGTGTTATATGAACACCTTCAGATTCATGTTCGAGAAATTTCGTTGGGAGAAAAACCAA
GAGTGTACAAGTGGTCTGAGGATAGTAGAGAAGATCCAAGTGGTTATCCAAAAGTCATTCGTGTGAATTATAAAGCATCGGATTATACGAATTGGGAGCTTCAAGAGGTG
GTCAAGCTGAGGACCAAAATTGGGACATTCCAACAGCAGTTTGACGAACAGTTGTTCAAGGCATGGGAGCGTTACAAAGAGTTGTTGAGGAAGTGCCCTCAGCATGGTTA
TCCTGGCTGGTTACAAATCCAACTCTTTTATAACGGTGTAAATCCCAGTACTAAAACCATTTTGGTTGCAGCTGCAGGTGGGACTCTGTTGTCCAAGACCGTGGAAAATG
CACGAGTATTTGAAATCGACAACGTAAGTGCACTCCAAGCTAAGATGTCCACCATTGCTAATGCTTTTCTTAAGTTTTCAGAATCAAGCAATAGGACGAACAAGCTGGTG
GAGGCCATGATCACCATAAACACCACAATGACTGGCCACAGTGCATAA
Protein sequenceShow/hide protein sequence
MLSWGRSCRSVGRYADSVATLSRFLHALSDHLALRRYGVKLNVLIASDLQLILHVLYEHLQIHVREISLGEKPRVYKWSEDSREDPSGYPKVIRVNYKASDYTNWELQEV
VKLRTKIGTFQQQFDEQLFKAWERYKELLRKCPQHGYPGWLQIQLFYNGVNPSTKTILVAAAGGTLLSKTVENARVFEIDNVSALQAKMSTIANAFLKFSESSNRTNKLV
EAMITINTTMTGHSA