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Lag0022818 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022818
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:38781523..38781909
RNA-Seq ExpressionLag0022818
SyntenyLag0022818
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7802400.1 uncharacterized protein G2W53_041511 [Senna tora]1.1e-0635.71Show/hide
Query:  KRIIASWSVKQLKMKAIQEGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHD
        K I   +SV+  +  A+ EG+     +  +N       +++E D+ASV+K+LN E  D + +SF+ ++I +L S+F   SF +  R +N VAH LAHD
Subjt:  KRIIASWSVKQLKMKAIQEGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHD

MBA0747565.1 hypothetical protein [Gossypium gossypioides]1.8e-0435.56Show/hide
Query:  EGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDNSPKG--SYL
        E + CL  V+ +   + F  +++E D+ +VVK L N+ +D+SEI+ + E++ R +  F E  F +  R++NG AH LA +    G  SYL
Subjt:  EGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDNSPKG--SYL

MBA0875880.1 hypothetical protein [Gossypium schwendimanii]6.2e-0535.16Show/hide
Query:  GLECLPSVRAINHG--MEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHD--NSPKGSYL
        G+E +   +A+  G  M++  ++IE D+ S++K    +  D S +S    +IH+L+  F E  F + PRS+NG+AH+LA +   S +G YL
Subjt:  GLECLPSVRAINHG--MEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHD--NSPKGSYL

XP_021753633.1 uncharacterized protein LOC110719026 [Chenopodium quinoa]1.1e-0636Show/hide
Query:  MGFKRIIASWSVKQLKMKAIQEGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAH
        +G ++I ASW V+  + KAI+ GL        +  G+    +V+ESD   V++ L N+  DLSE+S + ++I  L S+F  + + Y  R  N VAH  AH
Subjt:  MGFKRIIASWSVKQLKMKAIQEGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAH

XP_042962749.1 uncharacterized protein LOC122297028 [Carya illinoinensis]4.8e-0537.35Show/hide
Query:  AIQEGLECLPSVRAINHGMEF--PPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLA
        A  E +E    +R +  G+++    +V+ESD   ++ +LN+  E LS+ +++ +EI R+ S F EISFV+  R  N VAH LA
Subjt:  AIQEGLECLPSVRAINHGMEF--PPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLA

TrEMBL top hitse value%identityAlignment
A0A6D2I187 RNase H domain-containing protein1.1e-0437.36Show/hide
Query:  ECLPSVRAINHGME--FPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDNSPKGSYLGLSF
        E L    A+NH +E     + I SDA  ++++++ +E+ L EI  +  +IH LAS F  ISF Y PRS N +A  +A   +   S +GL F
Subjt:  ECLPSVRAINHGME--FPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDNSPKGSYLGLSF

A0A6D2IJ61 RNase H domain-containing protein1.1e-0442.31Show/hide
Query:  LECLPSVRAINHGME--FPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLA
        +E L    A+NH +E  F  + ++SDA  +++ LN +E+ L EI  L  +IH LA  F  ISF Y PRS N +A S+A
Subjt:  LECLPSVRAINHGME--FPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLA

A0A7J8RL81 RNase H domain-containing protein1.1e-0431.63Show/hide
Query:  GFKRIIASWSVKQLKMKAIQEGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLA
        G   +  S + K++      E L C   V+ I   M++  I+IE D+ +++K   ++ +D S++     +IH++   F  I F Y PRS NG+AH LA
Subjt:  GFKRIIASWSVKQLKMKAIQEGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLA

A0A7J9CHG1 Uncharacterized protein8.8e-0535.56Show/hide
Query:  EGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDNSPKG--SYL
        E + CL  V+ +   + F  +++E D+ +VVK L N+ +D+SEI+ + E++ R +  F E  F +  R++NG AH LA +    G  SYL
Subjt:  EGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDNSPKG--SYL

A0A7J9MY32 RNase H domain-containing protein3.0e-0535.16Show/hide
Query:  GLECLPSVRAINHG--MEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHD--NSPKGSYL
        G+E +   +A+  G  M++  ++IE D+ S++K    +  D S +S    +IH+L+  F E  F + PRS+NG+AH+LA +   S +G YL
Subjt:  GLECLPSVRAINHG--MEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHD--NSPKGSYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.9e-0428.41Show/hide
Query:  KMKAIQEG-LECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDN
        K+K++ E  LE +          ++  ++ ESD+  +++ILNN +E    +    +++ RL S F E+ FV+ PR  N +A  +A ++
Subjt:  KMKAIQEG-LECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCAAAAGGATCATTGCAAGCTGGTCCGTGAAACAACTTAAAATGAAAGCTATTCAGGAAGGATTGGAATGTTTACCTTCGGTTAGAGCAATCAATCATGGCAT
GGAATTCCCCCCTATCGTGATCGAATCGGATGCCGCCAGTGTGGTGAAAATCCTCAACAACGAAGAGGAAGATCTCTCTGAAATTTCATTCCTTGCGGAGGAGATTCATC
GTCTGGCCTCGACATTTCCTGAAATCTCGTTCGTTTACTGCCCCAGATCATCTAATGGAGTTGCGCATAGCTTGGCACATGATAACTCTCCAAAAGGGAGTTATTTAGGC
CTTAGTTTTATAGTATTTTGTGTGTCATTTGTGCTAAATAGGGTTGCGTTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTCAAAAGGATCATTGCAAGCTGGTCCGTGAAACAACTTAAAATGAAAGCTATTCAGGAAGGATTGGAATGTTTACCTTCGGTTAGAGCAATCAATCATGGCAT
GGAATTCCCCCCTATCGTGATCGAATCGGATGCCGCCAGTGTGGTGAAAATCCTCAACAACGAAGAGGAAGATCTCTCTGAAATTTCATTCCTTGCGGAGGAGATTCATC
GTCTGGCCTCGACATTTCCTGAAATCTCGTTCGTTTACTGCCCCAGATCATCTAATGGAGTTGCGCATAGCTTGGCACATGATAACTCTCCAAAAGGGAGTTATTTAGGC
CTTAGTTTTATAGTATTTTGTGTGTCATTTGTGCTAAATAGGGTTGCGTTTAGATGA
Protein sequenceShow/hide protein sequence
MGFKRIIASWSVKQLKMKAIQEGLECLPSVRAINHGMEFPPIVIESDAASVVKILNNEEEDLSEISFLAEEIHRLASTFPEISFVYCPRSSNGVAHSLAHDNSPKGSYLG
LSFIVFCVSFVLNRVAFR