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Lag0022836 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022836
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr7:39202543..39205837
RNA-Seq ExpressionLag0022836
SyntenyLag0022836
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEY15989.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]2.7e-0943.48Show/hide
Query:  SSERKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV---------DKTRDWLQSIPTGSVTTLDALVQAFLKRFFPPDE
        S  +K+ L  +  T +TL+LADRSITHP GV EDV VKV KF F  +FV            R W    P  S+ T + LV  F+ +FFPP +
Subjt:  SSERKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV---------DKTRDWLQSIPTGSVTTLDALVQAFLKRFFPPDE

XP_010906452.1 uncharacterized protein LOC105033389 [Elaeis guineensis]1.8e-0869.57Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV
        RK+GL  +K T V+LQLADRS+T+P G+VEDVLVK++KFIFPVDF+
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV

XP_022843128.1 uncharacterized protein LOC111366647 [Olea europaea var. sylvestris]1.9e-1062.71Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIPTG
        +K+GL  +K T +TLQLADRS+T+P G++EDVLVKVNKFIFP DFV    +  Q IPTG
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIPTG

XP_022863492.1 uncharacterized protein LOC111383608 [Olea europaea var. sylvestris]3.5e-0963.16Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIP
        +K+GL  +K T VTLQLADRS+T+P G++EDVLVKV+KFIFPVDFV    +  Q IP
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIP

XP_022889504.1 uncharacterized protein LOC111405046 [Olea europaea var. sylvestris]1.0e-0861.4Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIP
        +K+GL  +K T VTLQLADRS+T+P G++EDVLVKV+KFIFP DFV    +  Q IP
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIP

TrEMBL top hitse value%identityAlignment
A0A2G9GC02 DNA-directed DNA polymerase2.5e-0867.39Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV
        R +GL   K TD+TLQLAD+S+T+P GV+ED+LVKV+KFIFP DFV
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV

A0A2P5B7A0 Aspartic peptidase domain containing protein1.9e-0867.39Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV
        +K+GL+ +K T +TLQ+ADRS+T+P G +EDVLVKV+KFIFPVDFV
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV

A0A438D6Z2 Retrovirus-related Pol polyprotein from transposon 17.61.9e-0838.89Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIPTGSVTTLDALVQAFLKRFFPPDEGGRRGLQ--------DSKPA
        +++GL G+K T +TL LADRS+  P GV+EDVLV+V+KF +PVDFV   R+ +  +  G++ TL+  +    KR   P+E    G +        D K +
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIPTGSVTTLDALVQAFLKRFFPPDEGGRRGLQ--------DSKPA

Query:  HRCGARHT
        + C  R T
Subjt:  HRCGARHT

A0A438GJ35 Reverse transcriptase3.2e-0843.75Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIPTGSVTTLDALVQAFLKRFFPPDE
        +++GL G+K T +TL LA+RS+  P GV+EDVLV+V+KF +PVDFV    +W+  +  G++ TL+  +    KR   P+E
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIPTGSVTTLDALVQAFLKRFFPPDE

A0A6I9QBH1 uncharacterized protein LOC1050333898.5e-0969.57Show/hide
Query:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV
        RK+GL  +K T V+LQLADRS+T+P G+VEDVLVK++KFIFPVDF+
Subjt:  RKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACACTAAGAAGTGGTAGGAAGTTGGAGATCAATTCAGAAAAGAAGAAGGAAGAAGAAAAGAGCAAGGATGAAGATGAAAGGACTGAGGCACAAAAAACCTCCTC
TGAAAGGAAGATTGGTTTAACAGGAATGAAGGACACCGACGTCACTCTCCAGCTTGCTGATAGATCGATTACCCACCCGATGGGTGTTGTGGAGGACGTACTAGTAAAAG
TCAACAAATTTATCTTTCCCGTAGACTTTGTGGATAAAACACGAGATTGGTTGCAGTCTATTCCCACTGGAAGCGTCACCACCTTGGATGCTTTGGTCCAGGCCTTTCTG
AAGAGATTTTTCCCTCCTGATGAGGGGGGAAGACGTGGCCTGCAAGACAGTAAACCTGCACACCGGTGTGGTGCTCGCCACACCGGCTCCGATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGACACTAAGAAGTGGTAGGAAGTTGGAGATCAATTCAGAAAAGAAGAAGGAAGAAGAAAAGAGCAAGGATGAAGATGAAAGGACTGAGGCACAAAAAACCTCCTC
TGAAAGGAAGATTGGTTTAACAGGAATGAAGGACACCGACGTCACTCTCCAGCTTGCTGATAGATCGATTACCCACCCGATGGGTGTTGTGGAGGACGTACTAGTAAAAG
TCAACAAATTTATCTTTCCCGTAGACTTTGTGGATAAAACACGAGATTGGTTGCAGTCTATTCCCACTGGAAGCGTCACCACCTTGGATGCTTTGGTCCAGGCCTTTCTG
AAGAGATTTTTCCCTCCTGATGAGGGGGGAAGACGTGGCCTGCAAGACAGTAAACCTGCACACCGGTGTGGTGCTCGCCACACCGGCTCCGATGCTTAA
Protein sequenceShow/hide protein sequence
MVTLRSGRKLEINSEKKKEEEKSKDEDERTEAQKTSSERKIGLTGMKDTDVTLQLADRSITHPMGVVEDVLVKVNKFIFPVDFVDKTRDWLQSIPTGSVTTLDALVQAFL
KRFFPPDEGGRRGLQDSKPAHRCGARHTGSDA