CuGenDBv2

Gene ID	Lag0022837
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	RING-type E3 ubiquitin transferase
Genome location	chr7:39213295..39213744
RNA-Seq Expression	Lag0022837
Synteny	Lag0022837
Gene Ontology terms	GO:0005622 - intracellular (cellular component) GO:0016740 - transferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584229.1 U-box domain-containing protein 19, partial [Cucurbita argyrosperma subsp. sororia]

7.7e-31

71.54

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MFQNS  SD RILTF AVH  CEAI   TLLA  +    QICN Q K FVTQKRNARE IRQI ILLIF EEL D+S  LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED   S A+I +LMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

KAG7019826.1 U-box domain-containing protein 19, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-31

72.36

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MFQNS  SD RILTF AVH  CEAI   TLLA  +    QICNRQ K FVTQKRNARE IRQI ILLIF EEL D+S  LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED   S A+I +LMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

XP_022923709.1 LOW QUALITY PROTEIN: U-box domain-containing protein 19-like [Cucurbita moschata]

7.7e-31

71.54

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MFQNS  SD RILTF AVH  CEAI   TLLA  +    QICNRQ K FVTQKRNARE IRQI ILLIF EEL D+   LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED   S A+I +LMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

XP_023000658.1 U-box domain-containing protein 19-like [Cucurbita maxima]

9.1e-32

72.36

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MFQNS  SD RILTF AVH  CEAI   TLLA  +    QICN Q K FVTQKRNARE IRQI ILLIF EEL D+S  LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED   S A+I MLMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

XP_023519714.1 U-box domain-containing protein 19-like [Cucurbita pepo subsp. pepo]

6.5e-30

70.97

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDIST-ALPDSVVLCFSELHLTFHKIL
        MFQNS  SD RILTF AVH  CEAI   TLLA  +    QICN Q K FVTQKRNARE IRQI ILLIF EEL D+S+  LPDSVVLCFSELHLTF KIL
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDIST-ALPDSVVLCFSELHLTFHKIL

Query:  LLFEDRCCSIARILMLMKSQFVAT
         LFED   S A+I +LMKSQFVAT
Subjt:  LLFEDRCCSIARILMLMKSQFVAT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AVW8 RING-type E3 ubiquitin transferase

1.6e-29

69.11

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MF+N   SD RILTF AVH  C AI   TLLA  +    QICN Q K FVTQKRNARE IRQI ILLIF EEL D+S+ LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED     A+I MLMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

A0A5A7UP25 RING-type E3 ubiquitin transferase

4.5e-29

68.29

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MF+N   SD RILTF AVH  C AI   TLLA  +    QICN Q K FVTQKRNARE IRQI ILLIF EEL D+S+ LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED      +I MLMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

A0A5D3BLV3 RING-type E3 ubiquitin transferase

1.6e-29

69.11

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MF+N   SD RILTF AVH  C AI   TLLA  +    QICN Q K FVTQKRNARE IRQI ILLIF EEL D+S+ LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED     A+I MLMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

A0A6J1E762 RING-type E3 ubiquitin transferase

3.7e-31

71.54

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Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MFQNS  SD RILTF AVH  CEAI   TLLA  +    QICNRQ K FVTQKRNARE IRQI ILLIF EEL D+   LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED   S A+I +LMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

A0A6J1KN84 RING-type E3 ubiquitin transferase

4.4e-32

72.36

Show/hide

Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL
        MFQNS  SD RILTF AVH  CEAI   TLLA  +    QICN Q K FVTQKRNARE IRQI ILLIF EEL D+S  LPDSVVLCFSELHLTF KIL 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLP---QICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILL

Query:  LFEDRCCSIARILMLMKSQFVAT
        LFED   S A+I MLMKSQFVAT
Subjt:  LFEDRCCSIARILMLMKSQFVAT

SwissProt top hits

e value

%identity

Alignment

O80742 U-box domain-containing protein 19

7.3e-08

38.52

Show/hide

Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTL---LARSLPQICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDI----STALPDSVVLCFSELHLTFH
        M    + S  RILTF AV + CE+I L TL   L +   +I + + K F T KR+ +E +R ++ L+IF EEL       S     SV+L  SELH+ F 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTL---LARSLPQICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDI----STALPDSVVLCFSELHLTFH

Query:  KILLLFEDRCCSIARILMLMKS
        K+  L +D     A++ MLM S
Subjt:  KILLLFEDRCCSIARILMLMKS

Arabidopsis top hits

e value

%identity

Alignment

AT1G60190.1 ARM repeat superfamily protein

5.2e-09

38.52

Show/hide

Query:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTL---LARSLPQICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDI----STALPDSVVLCFSELHLTFH
        M    + S  RILTF AV + CE+I L TL   L +   +I + + K F T KR+ +E +R ++ L+IF EEL       S     SV+L  SELH+ F 
Subjt:  MFQNSSHSDGRILTFSAVHDQCEAIFLVTL---LARSLPQICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDI----STALPDSVVLCFSELHLTFH

Query:  KILLLFEDRCCSIARILMLMKS
        K+  L +D     A++ MLM S
Subjt:  KILLLFEDRCCSIARILMLMKS

Sequences

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CDS sequence

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ATGGGTTCTTCAATGTTTCAAAATTCCAGCCACTCCGATGGTCGGATTCTCACTTTTTCGGCGGTTCATGATCAATGCGAAGCAATTTTTCTGGTGACCCTTTTGGCTCG
ATCTCTGCCGCAAATATGCAATCGCCAAAAGAAAATCTTTGTAACCCAAAAACGAAACGCTCGAGAAATGATTCGACAAATCAGAATCTTGTTGATATTTTTGGAGGAGC
TTCACGACATTTCAACTGCTCTTCCGGATTCAGTCGTACTCTGTTTTTCAGAGCTTCACCTCACGTTTCACAAAATCTTGTTATTGTTCGAAGATCGTTGTTGTTCTATT
GCAAGGATTTTGATGTTAATGAAATCCCAATTCGTTGCCACATTAGTTGTGGGTTTTAATTTGAGCTCTCGCGACGGCTCTCAATGTGTTTCCGTTGAATCAGATCGATA
CGAGCGATGA

mRNA sequence

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Protein sequence

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MGSSMFQNSSHSDGRILTFSAVHDQCEAIFLVTLLARSLPQICNRQKKIFVTQKRNAREMIRQIRILLIFLEELHDISTALPDSVVLCFSELHLTFHKILLLFEDRCCSI
ARILMLMKSQFVATLVVGFNLSSRDGSQCVSVESDRYER

Lag0022837 (gene) of Sponge gourd (AG-4) v1 genome