; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022846 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022846
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr7:39327395..39332833
RNA-Seq ExpressionLag0022846
SyntenyLag0022846
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.4e-1147.06Show/hide
Query:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQ
        T +F +      +++R STS FDRLK+TNDQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL   P       RF    +P  EG +
Subjt:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQ

Query:  AL
         +
Subjt:  AL

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]1.1e-1048.98Show/hide
Query:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEG
        T +F +      +++R STS FDRLK+TNDQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL   P       RF    +P  EG
Subjt:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEG

KAA0051997.1 hypothetical protein E6C27_scaffold60G004810 [Cucumis melo var. makuwa]1.2e-1256.1Show/hide
Query:  MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGS
        M +++LH  FSF K K    ++ R STS FDRLK+T DQ +R+M +L+VK F E N D K+HS VPSRMKRK SV I TEG+
Subjt:  MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGS

KAA0068201.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.4e-1147.06Show/hide
Query:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQ
        T +F +       ++R STS FDRLK+TNDQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL   P       RF    +P  EG +
Subjt:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQ

Query:  AL
         +
Subjt:  AL

TYK30948.1 hypothetical protein E5676_scaffold455G001730 [Cucumis melo var. makuwa]2.2e-1158.67Show/hide
Query:  MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSV
        M +V+ HS FSF KAK LHIEE+R STS FD LK+TNDQ +R+M  L+ K F E N D K++S V S MKRK  V
Subjt:  MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSV

TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein3.1e-1147.06Show/hide
Query:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQ
        T +F +      +++R STS FDRLK+TNDQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL   P       RF    +P  EG +
Subjt:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQ

Query:  AL
         +
Subjt:  AL

A0A5A7UC34 Uncharacterized protein5.7e-1356.1Show/hide
Query:  MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGS
        M +++LH  FSF K K    ++ R STS FDRLK+T DQ +R+M +L+VK F E N D K+HS VPSRMKRK SV I TEG+
Subjt:  MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGS

A0A5A7VRG7 Retrotransposon gag protein4.1e-1147.06Show/hide
Query:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQ
        T +F +       ++R STS FDRLK+TNDQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL   P       RF    +P  EG +
Subjt:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQ

Query:  AL
         +
Subjt:  AL

A0A5D3BBF9 Gag protease polyprotein5.3e-1148.98Show/hide
Query:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEG
        T +F +      +++R STS FDRLK+TNDQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL   P       RF    +P  EG
Subjt:  TFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEG

A0A5D3E580 Uncharacterized protein1.1e-1158.67Show/hide
Query:  MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSV
        M +V+ HS FSF KAK LHIEE+R STS FD LK+TNDQ +R+M  L+ K F E N D K++S V S MKRK  V
Subjt:  MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAATCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAA
CGATCAACCTAAAAGAAAGATGAACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCT
CTGTTCTCATAACTACAGAAGGTTCCTTGAAGTTCCTTCCCCCAAATTCGAAGGTTCTCAGACGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCAGGCGCTT
CGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCCAAGT
TCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCT
GCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGTTTCGGTGAAGTTCCTTCCTCCCAAGTTCGAAGGTTCTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCTCA
CGCGCTTCGCAGCAGTTCCTTCCCCCTAAGTTCGAAGCGTTCTCTCCGTTGCTACCTTCCTCCAAGTTCAAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGT
TCGAAGGTTCCTCACGCGCTTCGTTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCGAAGTTCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTC
CAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTTGAAGGCGCTTCTCTCCACT
GCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCATTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTC
ACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGGT
TCTCTCACGCGCTACTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCACTGCTCCTTCTCCA
AGTTCGAAGGTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCT
CCTTCTCCAAGTTCAAGGCGCTTCTCTCCACTGCTCCTTCTCGAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGCGCTTCTCTCCGCTGCTCCTT
CTCCAAGTTCGAAGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACGCTCCTTCTCC
AAGTTCAAGGCGCTTCTCTCCACCCCTCCTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTGGTGAAGTCACTGCAAGTGAATCTGATGACGACCT
TGTAGGCGAGTCGAGTCTGGTGACCACCCTTGCAGGTCTAGCAGGAGTGCATCGTGTAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGG
GACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGGTGCATCGTTGTAGGC
GAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGGCATGAAGGCGAATCTGGTGACTACCCTGCAGGTTACTCAGA
TCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGACTGGGTCTAGCAG
GAGCGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACGGTCTAGCAGGAGTGAGATCACTGCAAGTGAAGCTGACTGAA
GACTCCTTCAAGATTTGGAAGACTTCAAGCTCCAAGAATCCGTTGAAGCTCCAGACTCGAGATCAAGCGTTCCAGCCCTCGAGTGAAACACATCCACACACAAGAGAGAG
AACTCAGAGTCGAGAGAATTCTGTAGAGTCCAGAGTCATCAGAAGTCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAGAATTCAACCAACTCAAGACT
CAAAAGGCCGATCATTCAAGAAGATCAACAAGTCAGTAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAAAAGATCAACAAGCCAGCAGGCCGA
TCATCCAAAAAGATCAACAAGTCACAACAGGTCGATCCAGAAGATCATCAAGCCAACAGGCCGATCCAAAAGATCATTAAGCCAGCAGGCCGATCATCCAAGAAGATCAA
CAAGCCAATAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAATCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAA
CGATCAACCTAAAAGAAAGATGAACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCT
CTGTTCTCATAACTACAGAAGGTTCCTTGAAGTTCCTTCCCCCAAATTCGAAGGTTCTCAGACGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCAGGCGCTT
CGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCCAAGT
TCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCT
GCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGTTTCGGTGAAGTTCCTTCCTCCCAAGTTCGAAGGTTCTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCTCA
CGCGCTTCGCAGCAGTTCCTTCCCCCTAAGTTCGAAGCGTTCTCTCCGTTGCTACCTTCCTCCAAGTTCAAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGT
TCGAAGGTTCCTCACGCGCTTCGTTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCGAAGTTCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTC
CAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTTGAAGGCGCTTCTCTCCACT
GCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCATTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTC
ACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGGT
TCTCTCACGCGCTACTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCACTGCTCCTTCTCCA
AGTTCGAAGGTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCT
CCTTCTCCAAGTTCAAGGCGCTTCTCTCCACTGCTCCTTCTCGAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGCGCTTCTCTCCGCTGCTCCTT
CTCCAAGTTCGAAGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACGCTCCTTCTCC
AAGTTCAAGGCGCTTCTCTCCACCCCTCCTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTGGTGAAGTCACTGCAAGTGAATCTGATGACGACCT
TGTAGGCGAGTCGAGTCTGGTGACCACCCTTGCAGGTCTAGCAGGAGTGCATCGTGTAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGG
GACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGGTGCATCGTTGTAGGC
GAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGGCATGAAGGCGAATCTGGTGACTACCCTGCAGGTTACTCAGA
TCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGACTGGGTCTAGCAG
GAGCGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACGGTCTAGCAGGAGTGAGATCACTGCAAGTGAAGCTGACTGAA
GACTCCTTCAAGATTTGGAAGACTTCAAGCTCCAAGAATCCGTTGAAGCTCCAGACTCGAGATCAAGCGTTCCAGCCCTCGAGTGAAACACATCCACACACAAGAGAGAG
AACTCAGAGTCGAGAGAATTCTGTAGAGTCCAGAGTCATCAGAAGTCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAGAATTCAACCAACTCAAGACT
CAAAAGGCCGATCATTCAAGAAGATCAACAAGTCAGTAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAAAAGATCAACAAGCCAGCAGGCCGA
TCATCCAAAAAGATCAACAAGTCACAACAGGTCGATCCAGAAGATCATCAAGCCAACAGGCCGATCCAAAAGATCATTAAGCCAGCAGGCCGATCATCCAAGAAGATCAA
CAAGCCAATAAGTTGA
Protein sequenceShow/hide protein sequence
MFDVHLHSTFSFPKAKCLHIEENRSSTSVFDRLKVTNDQPKRKMNNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLPPNSKVLRRFAAVPSPKFEGSQAL
RCSSFLTVRRFSRASLQFLPPSSKVLTRFGEVPSSQVRRFLRASLQFLPPSSKVLTRFAAVPSPKFEGSHALRCSSFLTVRRFSRVSVKFLPPKFEGSTRFAAVPSSKFS
RASQQFLPPKFEAFSPLLPSSKFKGSLTRCCSSFLQVRRFLTRFVRSFSKFEGASLHCSFSKFEGASLRCYLPPSSKVLSRAAAAPSSKFEGSSRASLAPSPSLKALLST
APSPSSKALLSIATFLQVRRFSHALLQFLPPSSKVLSRASLAPSPSSKALLSTAPSPSSKAFLSVATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTAPSP
SSKVLSVATFLQVRRFSHALCSSFLQVRRFPHALRSLLLQVQGASLHCSFSKFEGASLRCYFSKFEALLSAAPSPSSKRFSPLLLLQVRRRFSPLLLLQVRRRFSLRSFS
KFKALLSTPPFEGSPLRFSFSKFEGGEVTASESDDDLVGESSLVTTLAGLAGVHRVGESGDYPCRLLRSPNKMGLGLAGVHEGESGDYPAGYSDHPIKWGLGLAGCIVVG
ESGDYPCRLLRSPNKMGTGSSRRHEGESGDYPAGYSDHPIKWGLGLAGVHEGESGDYPCRLLRSPNKMGLGLAGAHEGESGDYPCRLLRSPNEIGDGLAGVRSLQVKLTE
DSFKIWKTSSSKNPLKLQTRDQAFQPSSETHPHTRERTQSRENSVESRVIRSQKSESLENSEDPRFRIQPTQDSKGRSFKKINKSVDRSSKKINKPTGRSSKKINKPAGR
SSKKINKSQQVDPEDHQANRPIQKIIKPAGRSSKKINKPIS