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Lag0022856 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022856
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 reverse transcriptase-like
Genome locationchr7:39412186..39412668
RNA-Seq ExpressionLag0022856
SyntenyLag0022856
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW53067.1 putative ribonuclease H protein [Vitis vinifera]1.8e-1432.59Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS
        F +G+G++++FW++KW    P CE +PS F +A SK A + DCW +  EV  WN   +R   + E+E++   + I++G + N +  +++ W     G  S
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS

Query:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
         KS  N L  S          +IW    P +V FF
Subjt:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

RVW65596.1 putative ribonuclease H protein [Vitis vinifera]1.8e-1432.59Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS
        F +G+G++++FW++KW    P CE +PS F +A SK A + DCW +  EV  WN   +R   + E+E++   + I++G + N +  +++ W     G  S
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS

Query:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
         KS  N L  S          +IW    P +V FF
Subjt:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

RVX02835.1 LINE-1 reverse transcriptase-like [Vitis vinifera]1.4e-1431.34Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEEANQICWNPEASGVLST
        FK+G G ++ FW NKW       + FP  F +A  + A + + W + R    WNL+L R   + EL+ + D++++L   + + E + + W  E +GV   
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEEANQICWNPEASGVLST

Query:  KSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
        K A  +L GS        +  IW  K P +V+FF
Subjt:  KSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

RVX10661.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.4e-1432.09Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCW--SAEREVWNLNLIRGLFNRELEDLVDLVSILEGIKPNEEANQICWNPEASGVLST
        FK+G G ++ FW +KW       + FP  F +A  + A   + W  S  +  WNLNL+R   + EL+ + D++++L   K + E + + W  E +GV   
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCW--SAEREVWNLNLIRGLFNRELEDLVDLVSILEGIKPNEEANQICWNPEASGVLST

Query:  KSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
        K A  +L GS        +  IW  K P +V+FF
Subjt:  KSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

RVX12455.1 SEC12-like protein 2 [Vitis vinifera]8.3e-1532.59Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS
        F +G+G++++FW++KW    P CE +PS F +A SK A + DCW    EV  WN   +R   + E+E++   + I++G + N +  +++ W     G+ S
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS

Query:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
         KS  N L  S          +IW    P +V FF
Subjt:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

TrEMBL top hitse value%identityAlignment
A0A438EZ82 Putative ribonuclease H protein8.9e-1532.59Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS
        F +G+G++++FW++KW    P CE +PS F +A SK A + DCW +  EV  WN   +R   + E+E++   + I++G + N +  +++ W     G  S
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS

Query:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
         KS  N L  S          +IW    P +V FF
Subjt:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

A0A438J1K7 LINE-1 reverse transcriptase-like6.8e-1531.34Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEEANQICWNPEASGVLST
        FK+G G ++ FW NKW       + FP  F +A  + A + + W + R    WNL+L R   + EL+ + D++++L   + + E + + W  E +GV   
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEEANQICWNPEASGVLST

Query:  KSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
        K A  +L GS        +  IW  K P +V+FF
Subjt:  KSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

A0A438JNW3 Transposon TX1 uncharacterized 149 kDa protein6.8e-1532.09Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCW--SAEREVWNLNLIRGLFNRELEDLVDLVSILEGIKPNEEANQICWNPEASGVLST
        FK+G G ++ FW +KW       + FP  F +A  + A   + W  S  +  WNLNL+R   + EL+ + D++++L   K + E + + W  E +GV   
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCW--SAEREVWNLNLIRGLFNRELEDLVDLVSILEGIKPNEEANQICWNPEASGVLST

Query:  KSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
        K A  +L GS        +  IW  K P +V+FF
Subjt:  KSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

A0A438JU43 SEC12-like protein 24.0e-1532.59Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS
        F +G+G++++FW++KW    P CE +PS F +A SK A + DCW    EV  WN   +R   + E+E++   + I++G + N +  +++ W     G+ S
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS

Query:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
         KS  N L  S          +IW    P +V FF
Subjt:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

A5BBP2 zf-RVT domain-containing protein8.9e-1531.85Show/hide
Query:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS
        F +G+G++++FW++ W    P CE +PS F +A SK A + DCW +  EV  WN   +R   + E+E++   + I++G + N +  +++ W     G+ S
Subjt:  FKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREV--WNLNLIRGLFNRELEDLVDLVSILEGIKPNEE-ANQICWNPEASGVLS

Query:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF
         KS  N L  S          +IW    P +V FF
Subjt:  TKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGCACCAAATGGCATAAATTCAGCCCTAGGAAGAACATCTGTAAAACGAGAGGCTTTTTCGAAATCAATATTAGATTTATTTAAAATTGGAAATGGGAGAAAGAT
TAAATTTTGGGAGAATAAGTGGGCGTCGCTAAGACCTTTTTGTGAAGAATTTCCTTCCTTTTTTGCCATTGCCAACTCCAAAGGAGCTTCTATCCAAGATTGTTGGTCCG
CTGAAAGAGAAGTTTGGAACCTAAACCTTATAAGAGGGCTTTTCAATAGAGAATTGGAAGATTTGGTTGATCTCGTATCAATCCTTGAGGGAATCAAGCCAAATGAAGAG
GCCAATCAGATTTGTTGGAACCCAGAGGCTTCTGGAGTGTTATCAACCAAATCTGCTGCCAATTTACTTCATGGAAGCTACTGTTTTCTCCATCAGACTCTTTCCAATTT
AATTTGGGAGGGGAAAAGTCCAAGACAGGTTAATTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGCACCAAATGGCATAAATTCAGCCCTAGGAAGAACATCTGTAAAACGAGAGGCTTTTTCGAAATCAATATTAGATTTATTTAAAATTGGAAATGGGAGAAAGAT
TAAATTTTGGGAGAATAAGTGGGCGTCGCTAAGACCTTTTTGTGAAGAATTTCCTTCCTTTTTTGCCATTGCCAACTCCAAAGGAGCTTCTATCCAAGATTGTTGGTCCG
CTGAAAGAGAAGTTTGGAACCTAAACCTTATAAGAGGGCTTTTCAATAGAGAATTGGAAGATTTGGTTGATCTCGTATCAATCCTTGAGGGAATCAAGCCAAATGAAGAG
GCCAATCAGATTTGTTGGAACCCAGAGGCTTCTGGAGTGTTATCAACCAAATCTGCTGCCAATTTACTTCATGGAAGCTACTGTTTTCTCCATCAGACTCTTTCCAATTT
AATTTGGGAGGGGAAAAGTCCAAGACAGGTTAATTTCTTCTAG
Protein sequenceShow/hide protein sequence
MIAPNGINSALGRTSVKREAFSKSILDLFKIGNGRKIKFWENKWASLRPFCEEFPSFFAIANSKGASIQDCWSAEREVWNLNLIRGLFNRELEDLVDLVSILEGIKPNEE
ANQICWNPEASGVLSTKSAANLLHGSYCFLHQTLSNLIWEGKSPRQVNFF