| GenBank top hits | e value | %identity | Alignment |
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| CAN77529.1 hypothetical protein VITISV_041425 [Vitis vinifera] | 3.1e-24 | 40.91 | Show/hide |
Query: PPIFPLASLPLCLNLFTTILRPLWFTTHIPPSLPPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLHFEPSSFKTTVKCVEWCDAM
PP+ +S P T T+ P L P PS P S P P N H +VTR+K+ I+K K +L +S EP ++ K W AM
Subjt: PPIFPLASLPLCLNLFTTILRPLWFTTHIPPSLPPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLHFEPSSFKTTVKCVEWCDAM
Query: QKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
Q + L N+TW LVPP P+ ++ +W+YK+K SNG +ER K RLV+ Q G+DYFDTFNPV+KP TIRL
Subjt: QKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| RVW26376.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 7.0e-24 | 40.56 | Show/hide |
Query: VPPIFPLASLPLCLNLFTTILRPLWFTTHIPPSLPPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLH---FEPSSFKTTVKCVEW
V PI P++SL L+ ++ L P+ T+ S+ F + +P+ P VP P H + TR+K I+KPK +LS ++ +EP+SFK VK EW
Subjt: VPPIFPLASLPLCLNLFTTILRPLWFTTHIPPSLPPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLH---FEPSSFKTTVKCVEW
Query: CDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
AM + + L+ N TW LVPP P +I +WVYK+K NG +E K RLV+ Q DYF+TF+PV+KP TIR+
Subjt: CDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| RVW62840.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera] | 1.4e-24 | 43.79 | Show/hide |
Query: THIPPSLPPF---PLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYK
T SLPP P PS P S P P N H +VTR+K+ I+K K +L +S EP ++ K W AMQ + L++N+TW LVPP P+
Subjt: THIPPSLPPF---PLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYK
Query: LISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
++ +W+YK+K NG +ER K RLV+ Q G+DYFDTF+PV+KP TIRL
Subjt: LISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| RVW74911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.1e-24 | 43.79 | Show/hide |
Query: THIPPSLPPF---PLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYK
T SLPP P PS P S P P N H +VTR+K+ I+K K +L +S EP ++ K W AMQ + L++N+TW LVPP P+
Subjt: THIPPSLPPF---PLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYK
Query: LISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
++ +W+YK+K NG +ER K RLV+ Q G+DYFDTF+PV+KP TIRL
Subjt: LISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| RVX10285.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-24 | 43.79 | Show/hide |
Query: THIPPSLPPF---PLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYK
T SLPP P PS P S P P N H +VTR+K+ I+K K +L +S EP ++ K W AMQ + L++N+TW LVPP P+
Subjt: THIPPSLPPF---PLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYK
Query: LISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
++ +W+YK+K NG +ER K RLV+ Q G+DYFDTF+PV+KP TIRL
Subjt: LISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FEK0 Uncharacterized protein | 1.6e-26 | 41.42 | Show/hide |
Query: TTHIPPSLPPFPLP--SLPSNVPPS---------------VPLPSSNIHLVVTRSKASIYKPK-CWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVL
T + PS+PP P P ++P+ +P S PLP+S H + TR+K+ I+KPK C+++ LH EP S+K V+ +WC AMQ+K D L
Subjt: TTHIPPSLPPFPLP--SLPSNVPPS---------------VPLPSSNIHLVVTRSKASIYKPK-CWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVL
Query: VKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
+ TW LV P+ ++ KWVYK+K S+G I R K +LV+ Q YG+DY TF+PV+KP T+RL
Subjt: VKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| A0A2N9GMF8 Uncharacterized protein | 1.0e-25 | 39.56 | Show/hide |
Query: MSSVPPI-FPLASLPLCLNLFTTILRPLWFTTHIPPSLPPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPK-CWLSSVSSLHFEPSSFKTTVKCV
+ S+PPI P A++P I + TT I ++ P P L + V + P P+ H + TR+K+ I+KPK C+++ LH EP S+K ++
Subjt: MSSVPPI-FPLASLPLCLNLFTTILRPLWFTTHIPPSLPPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPK-CWLSSVSSLHFEPSSFKTTVKCV
Query: EWCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
+WC AMQ++ D L + TW LV P P+ ++ KWVYK+K S+G I R K RLV+ Q YG+DY +TF+PV+KP T++L
Subjt: EWCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| A0A2N9H7Z0 Uncharacterized protein | 1.4e-25 | 42.18 | Show/hide |
Query: SLPPFPLPSLPSNVPPS-VPLPSSNIHLVVTRSKASIYKPK-CWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKW
++ P P+ + +PPS +P P N H + TRSK I+KPK C+ + + EP SFK + +WC AMQ + D L++ TW LVPP + ++ KW
Subjt: SLPPFPLPSLPSNVPPS-VPLPSSNIHLVVTRSKASIYKPK-CWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKW
Query: VYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
VYK+K S+G + R K RLV+ Q +GID+ +TF+PVIKP T+R+
Subjt: VYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| A0A2N9HBT2 Integrase catalytic domain-containing protein | 1.8e-25 | 38.89 | Show/hide |
Query: SSVPPIFPLASLPLCLNLFTTILRPLWFTTHIPPSLPPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKC-WLSSVSSLHFEPSSFKTTVKCVEW
+++P PL S T ++ P + T IP + P P + + P P P+ H + TR+K+ I+KPK +++ LH EP S+K V+ +W
Subjt: SSVPPIFPLASLPLCLNLFTTILRPLWFTTHIPPSLPPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKC-WLSSVSSLHFEPSSFKTTVKCVEW
Query: CDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
C AMQ++ D L + TW LV P P+ ++ +KWVYK+K S+G I R K RLV+ Q YG+DY TF+PV+KP T+RL
Subjt: CDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| A0A2N9I8T1 Uncharacterized protein | 1.4e-25 | 42.18 | Show/hide |
Query: SLPPFPLPSLPSNVPPS-VPLPSSNIHLVVTRSKASIYKPK-CWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKW
++ P P+ + +PPS +P P N H + TRSK I+KPK C+ + + EP SFK + +WC AMQ + D L++ TW LVPP + ++ KW
Subjt: SLPPFPLPSLPSNVPPS-VPLPSSNIHLVVTRSKASIYKPK-CWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKW
Query: VYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
VYK+K S+G + R K RLV+ Q +GID+ +TF+PVIKP T+R+
Subjt: VYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.0e-06 | 31.25 | Show/hide |
Query: WCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIR
W +A+ +++ NNTW + ++ +WV+ +K G R K RLV+ Q Y IDY +TF PV + ++ R
Subjt: WCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-08 | 36.46 | Show/hide |
Query: EPSSFKTTVKCVE---WCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIR
EP S K + E AMQ++++ L KN T+KLV + + KWV+K+K + ++ R K RLV +Q GID+ + F+PV+K +IR
Subjt: EPSSFKTTVKCVE---WCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIR
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 6.3e-20 | 42.86 | Show/hide |
Query: VVTRSKASIYK--PKCWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQA
++TRSKA I K PK L+ +++ EP S +K WC AMQ+++D L +N TW LVPP ++ KWV+K KL S+G ++R K RLV+ Q
Subjt: VVTRSKASIYK--PKCWLSSVSSLHFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFPAYKLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQA
Query: YGIDYFDTFNPVIKPATIR
GI + +T++PV++ ATIR
Subjt: YGIDYFDTFNPVIKPATIR
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.9e-17 | 37.58 | Show/hide |
Query: TTHIPPSL---PPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSL--HFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFP
T+ PPS+ PP PL + +N PL N H + TR+KA I KP S SL EP + +K W +AM +I+ + N+TW LVPP P
Subjt: TTHIPPSL---PPFPLPSLPSNVPPSVPLPSSNIHLVVTRSKASIYKPKCWLSSVSSL--HFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLVPPFP
Query: AY-KLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
++ ++ +W++ K S+G + R K RLV+ +Q G+DY +TF+PVIK +IR+
Subjt: AY-KLISWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.6e-17 | 37.09 | Show/hide |
Query: SLPPFPLPSLPSNVPPSVPLPSS---NIHLVVTRSKASIYKPKCWLSSVSSL--HFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLV-PPFPAYKLI
S PP P P LP+ PP + + + N H + TR+K I KP S +SL + EP + +K W AM +I+ + N+TW LV PP P+ ++
Subjt: SLPPFPLPSLPSNVPPSVPLPSS---NIHLVVTRSKASIYKPKCWLSSVSSL--HFEPSSFKTTVKCVEWCDAMQKKIDVLVKNNTWKLV-PPFPAYKLI
Query: SWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
+W++ K S+G + R K RLV+ +Q G+DY +TF+PVIK +IR+
Subjt: SWKWVYKIKLGSNGEIERSKTRLVSCSIDQAYGIDYFDTFNPVIKPATIRL
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