; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022880 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022880
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr7:40042104..40047189
RNA-Seq ExpressionLag0022880
SyntenyLag0022880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037203.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.0e-4375.83Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CDSDW  DTSDR STSGFIAFLGS+PISWS+KKQ T+S SS EAEYRSLATT  DLYW++QLLCDLH+ L   PTL CDNVSAISLA+NPVFHA 
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFVRGYSSTLAH
        TKHIEI+YHFVR  SS   H
Subjt:  TKHIEIDYHFVRGYSSTLAH

KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.2e-4584.68Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CDSDWA DTSDRRSTSGFIAFLGS+PISWS+KKQ  VS SSTEAEY SLATT ADLYW+RQLLCDLH+PL   PTL CDNVSAISLA+NPVFHAR
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFV
        TKHIEIDYHFV
Subjt:  TKHIEIDYHFV

KAA0047933.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.4e-4583.04Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CDSDW  DTSDRRSTSGFIAFLGS+PISW +KKQ TVS SSTEAEYRSLATT ADLYW+RQLLCDLH+PL   PTL CDNV AISL +NPVFHAR
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFVR
        TKHIEIDYHFVR
Subjt:  TKHIEIDYHFVR

XP_016901044.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.5e-4583.93Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CD DWAGDTSDRRSTS FIAFLGS+PISWS+KKQ TVS SSTEAEY SLATT  DLYW+RQLLCDLH+PL   PTL CDNVSAISLA+NPVFHAR
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFVR
        TKHIEIDYHFVR
Subjt:  TKHIEIDYHFVR

XP_016901898.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.6e-4275Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CDSDW  DTSDR STSGFIAFLGS+PISWS+KKQ T+S SS EAEYRSLATT  DLYW++QLLCDLH+ L   PTL CDNVSAISLA+NPVFHA 
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFVRGYSSTLAH
        TKHIEI+YHFV   SS   H
Subjt:  TKHIEIDYHFVRGYSSTLAH

TrEMBL top hitse value%identityAlignment
A0A1S4DYI8 uncharacterized mitochondrial protein AtMg00810-like1.2e-4583.93Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CD DWAGDTSDRRSTS FIAFLGS+PISWS+KKQ TVS SSTEAEY SLATT  DLYW+RQLLCDLH+PL   PTL CDNVSAISLA+NPVFHAR
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFVR
        TKHIEIDYHFVR
Subjt:  TKHIEIDYHFVR

A0A1S4E100 uncharacterized mitochondrial protein AtMg00810-like1.2e-4275Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CDSDW  DTSDR STSGFIAFLGS+PISWS+KKQ T+S SS EAEYRSLATT  DLYW++QLLCDLH+ L   PTL CDNVSAISLA+NPVFHA 
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFVRGYSSTLAH
        TKHIEI+YHFV   SS   H
Subjt:  TKHIEIDYHFVRGYSSTLAH

A0A5A7T2K7 Putative mitochondrial protein1.5e-4375.83Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CDSDW  DTSDR STSGFIAFLGS+PISWS+KKQ T+S SS EAEYRSLATT  DLYW++QLLCDLH+ L   PTL CDNVSAISLA+NPVFHA 
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFVRGYSSTLAH
        TKHIEI+YHFVR  SS   H
Subjt:  TKHIEIDYHFVRGYSSTLAH

A0A5A7TPR4 Putative mitochondrial protein1.6e-4584.68Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CDSDWA DTSDRRSTSGFIAFLGS+PISWS+KKQ  VS SSTEAEY SLATT ADLYW+RQLLCDLH+PL   PTL CDNVSAISLA+NPVFHAR
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFV
        TKHIEIDYHFV
Subjt:  TKHIEIDYHFV

A0A5A7TWG2 Putative mitochondrial protein4.6e-4583.04Show/hide
Query:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR
        SL T+CDSDW  DTSDRRSTSGFIAFLGS+PISW +KKQ TVS SSTEAEYRSLATT ADLYW+RQLLCDLH+PL   PTL CDNV AISL +NPVFHAR
Subjt:  SLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHAR

Query:  TKHIEIDYHFVR
        TKHIEIDYHFVR
Subjt:  TKHIEIDYHFVR

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.1e-1945.87Show/hide
Query:  YCDSDWAGDTSDRRSTSGFI-AFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHARTKH
        Y DSDWAG   DR+ST+G++      + I W+ K+Q +V+ SSTEAEY +L   + +  WL+ LL  ++I L  P  +  DN   IS+ANNP  H R KH
Subjt:  YCDSDWAGDTSDRRSTSGFI-AFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHARTKH

Query:  IEIDYHFVR
        I+I YHF R
Subjt:  IEIDYHFVR

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-1639.64Show/hide
Query:  LSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHART
        L  Y D+D AGD  +R+S++G++       ISW +K Q  V+ S+TEAEY +   T  ++ WL++ L +L +       + CD+ SAI L+ N ++HART
Subjt:  LSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHART

Query:  KHIEIDYHFVR
        KHI++ YH++R
Subjt:  KHIEIDYHFVR

P92519 Uncharacterized mitochondrial protein AtMg008102.5e-1665.62Show/hide
Query:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYW
        +++  +CDSDWAG TS RRST+GF  FLG + ISWSAK+QPTVS SSTE EYR+LA T A+L W
Subjt:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.1e-3057.52Show/hide
Query:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHA
        +SL  Y D+DWAGD  D  ST+G+I +LG  PISWS+KKQ  V  SSTEAEYRS+A T +++ W+  LL +L I L  PP + CDNV A  L  NPVFH+
Subjt:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHA

Query:  RTKHIEIDYHFVR
        R KHI IDYHF+R
Subjt:  RTKHIEIDYHFVR

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE28.1e-3158.41Show/hide
Query:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHA
        +SL  Y D+DWAGDT D  ST+G+I +LG  PISWS+KKQ  V  SSTEAEYRS+A T ++L W+  LL +L I L  PP + CDNV A  L  NPVFH+
Subjt:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHA

Query:  RTKHIEIDYHFVR
        R KHI +DYHF+R
Subjt:  RTKHIEIDYHFVR

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.9e-2546.46Show/hide
Query:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHA
        M L  + D+ +      RRST+G+  FLG+S ISW +KKQ  VS SS EAEYR+L+    ++ WL Q   +L +PL  P  L CDN +AI +A N VFH 
Subjt:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHA

Query:  RTKHIEIDYHFVRG---YSSTLAHAVE
        RTKHIE D H VR    Y +TL+++ +
Subjt:  RTKHIEIDYHFVRG---YSSTLAHAVE

AT5G66810.1 CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595)1.7e-2385.96Show/hide
Query:  LAHAVELTRQGAIDSLRFTKGDLFHAFQNELCRMKLDLSVLDELVREYCIYRGIVDS
        LAHAVELTRQGA+DS++F KGDLF AFQNELCRM+LD+SVLDELV+EYCIYRGIVDS
Subjt:  LAHAVELTRQGAIDSLRFTKGDLFHAFQNELCRMKLDLSVLDELVREYCIYRGIVDS

ATMG00810.1 DNA/RNA polymerases superfamily protein1.8e-1765.62Show/hide
Query:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYW
        +++  +CDSDWAG TS RRST+GF  FLG + ISWSAK+QPTVS SSTE EYR+LA T A+L W
Subjt:  MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCTCTACATATTGTGATTCTGACTGGGCTGGAGACACTTCTGATCGTCGGTCTACTTCTGGATTTATTGCCTTCCTTGGATCTAGTCCTATATCCTGGTCTGC
TAAAAAGCAACCCACAGTCTCATGTTCTTCTACAGAAGCAGAATATAGATCACTAGCAACTACAATAGCTGATCTTTATTGGCTACGTCAACTCCTTTGTGATCTCCATA
TTCCCCTGCTGGCTCCTCCAACATTGGGGTGTGACAATGTATCGGCAATTTCTCTTGCCAATAACCCGGTTTTCCATGCTCGGACGAAGCATATCGAGATTGACTACCAT
TTTGTTCGTGGATATTCAAGCACTCTTGCACATGCTGTAGAGCTAACAAGACAGGGGGCAATCGATAGCTTGAGATTCACCAAAGGTGATTTGTTTCATGCATTCCAGAA
TGAGTTGTGCCGGATGAAATTGGACCTTTCTGTACTTGATGAGCTTGTTCGTGAGTATTGCATCTACAGAGGAATTGTGGATTCTGGTTGTGGAGCTGTCCCCGGTAAAA
CTCAAATTTTGATTTCTGAATTTTATCAAATTTTGATTCCTGGACACCAACTTTTTGAACGATATGGTATGACTGAAGCATTACAAGCAAAGCTAGGAGCCAAGACGCTC
AAATCACTACTCTGCTTTAGGATCCTCAAGAATGAGTGTTCACTGCGCTGTTTTTCAAGTTTGATGTACGAGCAAGATTATGATGACAGGAATGAAAGCGGCATGATGGG
GGAGTCGAGTCTTCACTTGTTTTGGAATTGTAAACATACGAAGGAGATTATGTGGTTTGTAGGTTTTGGGACTATTTTGTCCAAGTGCAAGGCAGACGATATTAAGTTCC
TCCTTCGAGATGTAAATGATGAGTTGGAGTGGGATCGGTTTGAAGAATGGGTGGTGTTATTGTGGGTGATCTGGTTCAAGCGGAATGAAATGAGGAGGGAGATGGACCTG
TTAGGGGGAAGACCGAGTCGGGCTGTTTGCAGGTGGGCGATGTCGGAGTTTGATGGGTTTAAGGTGAATGTTGATGCAGCCTTCTGTCTGGAGAGCGGAACGCCCTTGGA
GCGTCTCAACGCTGGGCGCAAGTCAGGAGGCGCGCGCATACGAGGCAGCGTCGAGACGCTACCTCCACAGCGTCTCGACGCTGCATACTTTCCGAAAGTGATTAGGGCGT
ACATTGACACAGCGTCGAGACGCTGTCACGTAGAATCGACAGTATATAAAGAAAACGATGCTTTCAGATTTAGGGAGCCACTTTGGAGAGAGAAAGACGACTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCTCTACATATTGTGATTCTGACTGGGCTGGAGACACTTCTGATCGTCGGTCTACTTCTGGATTTATTGCCTTCCTTGGATCTAGTCCTATATCCTGGTCTGC
TAAAAAGCAACCCACAGTCTCATGTTCTTCTACAGAAGCAGAATATAGATCACTAGCAACTACAATAGCTGATCTTTATTGGCTACGTCAACTCCTTTGTGATCTCCATA
TTCCCCTGCTGGCTCCTCCAACATTGGGGTGTGACAATGTATCGGCAATTTCTCTTGCCAATAACCCGGTTTTCCATGCTCGGACGAAGCATATCGAGATTGACTACCAT
TTTGTTCGTGGATATTCAAGCACTCTTGCACATGCTGTAGAGCTAACAAGACAGGGGGCAATCGATAGCTTGAGATTCACCAAAGGTGATTTGTTTCATGCATTCCAGAA
TGAGTTGTGCCGGATGAAATTGGACCTTTCTGTACTTGATGAGCTTGTTCGTGAGTATTGCATCTACAGAGGAATTGTGGATTCTGGTTGTGGAGCTGTCCCCGGTAAAA
CTCAAATTTTGATTTCTGAATTTTATCAAATTTTGATTCCTGGACACCAACTTTTTGAACGATATGGTATGACTGAAGCATTACAAGCAAAGCTAGGAGCCAAGACGCTC
AAATCACTACTCTGCTTTAGGATCCTCAAGAATGAGTGTTCACTGCGCTGTTTTTCAAGTTTGATGTACGAGCAAGATTATGATGACAGGAATGAAAGCGGCATGATGGG
GGAGTCGAGTCTTCACTTGTTTTGGAATTGTAAACATACGAAGGAGATTATGTGGTTTGTAGGTTTTGGGACTATTTTGTCCAAGTGCAAGGCAGACGATATTAAGTTCC
TCCTTCGAGATGTAAATGATGAGTTGGAGTGGGATCGGTTTGAAGAATGGGTGGTGTTATTGTGGGTGATCTGGTTCAAGCGGAATGAAATGAGGAGGGAGATGGACCTG
TTAGGGGGAAGACCGAGTCGGGCTGTTTGCAGGTGGGCGATGTCGGAGTTTGATGGGTTTAAGGTGAATGTTGATGCAGCCTTCTGTCTGGAGAGCGGAACGCCCTTGGA
GCGTCTCAACGCTGGGCGCAAGTCAGGAGGCGCGCGCATACGAGGCAGCGTCGAGACGCTACCTCCACAGCGTCTCGACGCTGCATACTTTCCGAAAGTGATTAGGGCGT
ACATTGACACAGCGTCGAGACGCTGTCACGTAGAATCGACAGTATATAAAGAAAACGATGCTTTCAGATTTAGGGAGCCACTTTGGAGAGAGAAAGACGACTTCTAG
Protein sequenceShow/hide protein sequence
MSLSTYCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSCSSTEAEYRSLATTIADLYWLRQLLCDLHIPLLAPPTLGCDNVSAISLANNPVFHARTKHIEIDYH
FVRGYSSTLAHAVELTRQGAIDSLRFTKGDLFHAFQNELCRMKLDLSVLDELVREYCIYRGIVDSGCGAVPGKTQILISEFYQILIPGHQLFERYGMTEALQAKLGAKTL
KSLLCFRILKNECSLRCFSSLMYEQDYDDRNESGMMGESSLHLFWNCKHTKEIMWFVGFGTILSKCKADDIKFLLRDVNDELEWDRFEEWVVLLWVIWFKRNEMRREMDL
LGGRPSRAVCRWAMSEFDGFKVNVDAAFCLESGTPLERLNAGRKSGGARIRGSVETLPPQRLDAAYFPKVIRAYIDTASRRCHVESTVYKENDAFRFREPLWREKDDF