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Lag0022897 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022897
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L11
Genome locationchr7:40334167..40336948
RNA-Seq ExpressionLag0022897
SyntenyLag0022897
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KJB23930.1 hypothetical protein B456_004G122000 [Gossypium raimondii]3.2e-0668.89Show/hide
Query:  CHNFGTAAGKSTRPLPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        CHN   A       L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  CHNFGTAAGKSTRPLPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

XP_010451220.1 PREDICTED: 60S ribosomal protein L11-1-like [Camelina sativa]2.9e-0766.67Show/hide
Query:  HNFGTAAGKSTR----PLPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        H+FG    K+ +     L VKEYKLL RNFSDTGCFGF IQEHIDLGI
Subjt:  HNFGTAAGKSTR----PLPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

XP_010512842.1 PREDICTED: 60S ribosomal protein L11-1-like [Camelina sativa]2.4e-0690.32Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEYKLL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

XP_018847958.1 60S ribosomal protein L11-like [Juglans regia]7.1e-0687.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

XP_026411591.1 60S ribosomal protein L11-1-like [Papaver somniferum]5.4e-0678.79Show/hide
Query:  RPLPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        R L VKEY+LL RNFSDTGCFGF +QEHIDLG+
Subjt:  RPLPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

TrEMBL top hitse value%identityAlignment
A0A0D2RXW4 Uncharacterized protein1.5e-0668.89Show/hide
Query:  CHNFGTAAGKSTRPLPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        CHN   A       L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  CHNFGTAAGKSTRPLPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

A0A1U8I8P0 60S ribosomal protein L11-like3.4e-0687.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

A0A251S227 Putative ribosomal protein L53.4e-0687.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

K3YAB0 Uncharacterized protein3.4e-0687.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

Q6DXR9 Putative ribosomal protein3.4e-0687.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L112.7e-0883.87Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFS+TGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

P42794 60S ribosomal protein L11-29.3e-0987.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

P42795 60S ribosomal protein L11-19.3e-0987.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

P46287 60S ribosomal protein L119.3e-0987.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

Q0DK10 60S ribosomal protein L112.7e-0883.87Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFS+TGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A6.6e-1087.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

AT3G58700.1 Ribosomal L5P family protein6.6e-1087.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

AT4G18730.1 ribosomal protein L16B6.6e-1087.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

AT5G45775.1 Ribosomal L5P family protein6.6e-1087.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI

AT5G45775.2 Ribosomal L5P family protein6.6e-1087.1Show/hide
Query:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        L VKEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LPVKEYKLLDRNFSDTGCFGFDIQEHIDLGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCTGCAGATCAGAAGCTCCAACGATGGAAGTCTTTGTCTCTCTCGTTCTCGACTGAACCCTCTCTTCTGTGTGTCTCTTCCGACCGTATCGCGCACAGCTTCCTT
CCTGTCACTAAATGCCCAGTCGTCGATAGTCGCCCAGTCCTTTGATTCTTCCGACCATCACCGACGAGCGAAGCAGCCACGCGATTTCTCGTGTTGTGCAGAGGCTGTGG
AGACCGTGGGCTTGGGCTGCCACAACTTCGGCACTGCTGCAGGGAAGTCAACGCGGCCACTGCCCGTTAAGGAGTACAAGTTGCTTGACAGGAACTTCAGTGACACTGGA
TGTTTTGGCTTTGATATTCAGGAGCACATTGATCTTGGAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCTGCAGATCAGAAGCTCCAACGATGGAAGTCTTTGTCTCTCTCGTTCTCGACTGAACCCTCTCTTCTGTGTGTCTCTTCCGACCGTATCGCGCACAGCTTCCTT
CCTGTCACTAAATGCCCAGTCGTCGATAGTCGCCCAGTCCTTTGATTCTTCCGACCATCACCGACGAGCGAAGCAGCCACGCGATTTCTCGTGTTGTGCAGAGGCTGTGG
AGACCGTGGGCTTGGGCTGCCACAACTTCGGCACTGCTGCAGGGAAGTCAACGCGGCCACTGCCCGTTAAGGAGTACAAGTTGCTTGACAGGAACTTCAGTGACACTGGA
TGTTTTGGCTTTGATATTCAGGAGCACATTGATCTTGGAATCTAA
Protein sequenceShow/hide protein sequence
MDLQIRSSNDGSLCLSRSRLNPLFCVSLPTVSRTASFLSLNAQSSIVAQSFDSSDHHRRAKQPRDFSCCAEAVETVGLGCHNFGTAAGKSTRPLPVKEYKLLDRNFSDTG
CFGFDIQEHIDLGI