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Lag0022907 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022907
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:40644067..40644740
RNA-Seq ExpressionLag0022907
SyntenyLag0022907
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66044.1 hypothetical protein [Beta vulgaris subsp. vulgaris]6.6e-1342.86Show/hide
Query:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP
        NT++FH   S RKK+N ++GL D SGTW +E + I    TDYF  IF S  P+  +++  +  V   V++E N  LL PF K+E+ + L Q+HP K P
Subjt:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP

CCA66054.1 hypothetical protein [Beta vulgaris subsp. vulgaris]5.1e-1341.84Show/hide
Query:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP
        NT++FH   S RKK+N ++GL D  GTW +E + I +  T YF  IF S  P+   + + ++ +   V++E NL+LL PF K E+L  L+Q+HP K P
Subjt:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]3.0e-1336.7Show/hide
Query:  SGRQWSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVL
        S   W +    NT++FH   S R+++N I G+EDD G W+ +PEGI  +   +F  +F S  P+  +IS A+ G+   VS EMN  L  PF  +++   L
Subjt:  SGRQWSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVL

Query:  KQIHPNKPP
         ++ P K P
Subjt:  KQIHPNKPP

XP_010681249.1 PREDICTED: uncharacterized protein LOC104896230 [Beta vulgaris subsp. vulgaris]4.6e-1443.88Show/hide
Query:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP
        NT +FH   S  KK+N ++GL DD GTW ++ E +   IT+YF +IF+S  PT+ +    +  V   +S+E N  LL PFLK+E+  VL+Q+HP K P
Subjt:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP

XP_021760236.1 uncharacterized protein LOC110725072 [Chenopodium quinoa]1.2e-1443.27Show/hide
Query:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPPKR
        NTR+FH   S R+++NTI GL D +G W ++ E I + ++DYF+ IF S  PT+      +  VR  +S  MN RL  P+ K++V L LKQ+HP+K P  
Subjt:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPPKR

Query:  MVCR
         V R
Subjt:  MVCR

TrEMBL top hitse value%identityAlignment
A0A2N9GY02 Reverse transcriptase domain-containing protein2.7e-1240.95Show/hide
Query:  WSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIH
        W +    NT++FH   S R+K+NTI G+ D  G WI +PE I   I +Y+ +IF S    S  +  A+ GV   V+ EMN  LL P+   EV   L Q+H
Subjt:  WSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIH

Query:  PNKPP
        P+K P
Subjt:  PNKPP

A0A2N9H577 Reverse transcriptase domain-containing protein1.4e-1339.45Show/hide
Query:  SGRQWSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVL
        SG  W  +   NT++FH   S  ++ N I GL DDSG W  +   +      YF +IF+S  PT   +S+ + G+   VS+EMN  LL  F+  EVL+ L
Subjt:  SGRQWSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVL

Query:  KQIHPNKPP
        KQ++P K P
Subjt:  KQIHPNKPP

A0A803NGM9 Uncharacterized protein2.1e-1232.59Show/hide
Query:  WRQWPRVVWLPWVDGAGTDKEGIVSVSGRQWSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAG
        WRQ  R +WL W D                      LNT++FH+  S R+K+N I+GL D +G W  +   I   + DY+  +F++  P   ++   +  
Subjt:  WRQWPRVVWLPWVDGAGTDKEGIVSVSGRQWSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAG

Query:  VRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP
        VR  V+++MN  LL PF+ KEV+  +K ++P K P
Subjt:  VRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP

F4NCJ0 Reverse transcriptase domain-containing protein3.2e-1342.86Show/hide
Query:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP
        NT++FH   S RKK+N ++GL D SGTW +E + I    TDYF  IF S  P+  +++  +  V   V++E N  LL PF K+E+ + L Q+HP K P
Subjt:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP

F4NCJ6 Reverse transcriptase domain-containing protein2.5e-1341.84Show/hide
Query:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP
        NT++FH   S RKK+N ++GL D  GTW +E + I +  T YF  IF S  P+   + + ++ +   V++E NL+LL PF K E+L  L+Q+HP K P
Subjt:  NTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREISSAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGCTGGAGGAGTAAGGTGGGGGCTAACCCGCCAAGGGATGTGGCGTCAGTGGCCGAGGGTTGTTTGGTTGCCCTGGGTCGATGGGGCAGGGACAGATAAGGAGGG
TATAGTCAGCGTATCAGGGAGGCAGTGGTCCGAGTCCAGCAGGCTGAACACCCGATGGTTTCACAAACATACCTCGATGAGAAAGAAGCAGAACACGATTCGGGGGCTAG
AGGATGATTCTGGGACATGGATTCAAGAACCAGAGGGGATCGTAAGTCAGATTACTGATTATTTTGACCACATCTTTGCCTCGAGGTGTCCGACTTCGAGGGAGATTAGT
AGCGCGATTGCCGGTGTGAGGGTGGCTGTTAGTGATGAGATGAATTTGCGATTGCTCTGTCCCTTTCTTAAAAAGGAGGTTTTGCTAGTCTTGAAGCAGATCCACCCTAA
TAAACCGCCTAAACGAATGGTTTGTCGGGAGCGTTCTTCAGGCAGTCGTGGGATGTTGTGGAGGCGGTGTAGTGAGGTGCTGCTTGAGTATCCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGCTGGAGGAGTAAGGTGGGGGCTAACCCGCCAAGGGATGTGGCGTCAGTGGCCGAGGGTTGTTTGGTTGCCCTGGGTCGATGGGGCAGGGACAGATAAGGAGGG
TATAGTCAGCGTATCAGGGAGGCAGTGGTCCGAGTCCAGCAGGCTGAACACCCGATGGTTTCACAAACATACCTCGATGAGAAAGAAGCAGAACACGATTCGGGGGCTAG
AGGATGATTCTGGGACATGGATTCAAGAACCAGAGGGGATCGTAAGTCAGATTACTGATTATTTTGACCACATCTTTGCCTCGAGGTGTCCGACTTCGAGGGAGATTAGT
AGCGCGATTGCCGGTGTGAGGGTGGCTGTTAGTGATGAGATGAATTTGCGATTGCTCTGTCCCTTTCTTAAAAAGGAGGTTTTGCTAGTCTTGAAGCAGATCCACCCTAA
TAAACCGCCTAAACGAATGGTTTGTCGGGAGCGTTCTTCAGGCAGTCGTGGGATGTTGTGGAGGCGGTGTAGTGAGGTGCTGCTTGAGTATCCTGAATGA
Protein sequenceShow/hide protein sequence
MIAGGVRWGLTRQGMWRQWPRVVWLPWVDGAGTDKEGIVSVSGRQWSESSRLNTRWFHKHTSMRKKQNTIRGLEDDSGTWIQEPEGIVSQITDYFDHIFASRCPTSREIS
SAIAGVRVAVSDEMNLRLLCPFLKKEVLLVLKQIHPNKPPKRMVCRERSSGSRGMLWRRCSEVLLEYPE