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Lag0022912 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022912
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr7:40711608..40712464
RNA-Seq ExpressionLag0022912
SyntenyLag0022912
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]2.9e-7868.53Show/hide
Query:  MSFFSNIGIEKWTQSHDGGVR--YAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSH
        MSFF +I IEKWTQ+HDGG R  YA  KI+KW+ RS+K EV SYDRS G+FHVKT  H  N+KGGN+Q  RL+A E YCSCNKWQ FGIPCSHFMAVCS 
Subjt:  MSFFSNIGIEKWTQSHDGGVR--YAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSH

Query:  MNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
         N+NYEDF+EDYYK+STY  CY+ QFQP+PHEDYWITP   P+L  DP LLR+ GRPK+SRYHNEM W E S QQRC  C+QLGHN+RSC   +R+A
Subjt:  MNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

KAA0039601.1 uncharacterized protein E6C27_scaffold744G00780 [Cucumis melo var. makuwa]2.5e-6951.98Show/hide
Query:  MSFFSNIGIEKWTQSHDGGVR---------------------------------------------------------YAHDKIVKWATRSNKLEVLSYD
        MSFF +I I+KWTQ+HDGG +                                                         YA +KI+KW+ RS+K EV SYD
Subjt:  MSFFSNIGIEKWTQSHDGGVR---------------------------------------------------------YAHDKIVKWATRSNKLEVLSYD

Query:  RSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY
        RS G+FHVKTG H  N+K GN+Q  RL+A E YCSCNKWQ FGIPCSHFMAVCS  N+NYEDF+EDYYK+ TY  CY+PQFQP+PHEDYWITP   P+L 
Subjt:  RSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY

Query:  ADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
        +DP LLR+ GR KSSRYHNEM W E S QQRC  C+QLGHN+  C   +R+A
Subjt:  ADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

TYK01705.1 uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa]2.5e-6951.98Show/hide
Query:  MSFFSNIGIEKWTQSHDGGVR---------------------------------------------------------YAHDKIVKWATRSNKLEVLSYD
        MSFF +I I+KWTQ+HDGG +                                                         YA +KI+KW+ RS+K EV SYD
Subjt:  MSFFSNIGIEKWTQSHDGGVR---------------------------------------------------------YAHDKIVKWATRSNKLEVLSYD

Query:  RSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY
        RS G+FHVKTG H  N+K GN+Q  RL+A E YCSCNKWQ FGIPCSHFMAVCS  N+NYEDF+EDYYK+ TY  CY+PQFQP+PHEDYWITP   P+L 
Subjt:  RSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY

Query:  ADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
        +DP LLR+ GR KSSRYHNEM W E S QQRC  C+QLGHN+  C   +R+A
Subjt:  ADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

XP_008457265.1 PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo]2.7e-6867.43Show/hide
Query:  RYAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCY
        RYA +KI+KW+ RS+K EV SYDRS G+FHVKTG H  N+K GN+Q  RL+A E YCSCNKWQ FGIPCSHFMAVCS  N+NYEDF+EDYYK+ TY  CY
Subjt:  RYAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCY

Query:  SPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
        +PQFQP+PHEDYWITP   P+L +DP LLR+ GR KSSRYHNEM W E S QQRC  C+QLGHN+  C   +R+A
Subjt:  SPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

XP_022143642.1 uncharacterized protein LOC111013502 [Momordica charantia]9.4e-6952.96Show/hide
Query:  MSFFSNIGIEKWTQSHDGG----------------------------------------------------------VRYAHDKIVKWATRSNKLEVLSY
        M+FF NI IEKWT SHDGG                                                           RYA+DK+V+WA RS K  V+SY
Subjt:  MSFFSNIGIEKWTQSHDGG----------------------------------------------------------VRYAHDKIVKWATRSNKLEVLSY

Query:  DRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPIL
        DR  GVFHVKTG HY+N+KGGN Q  R+TA+E  C+CNKWQ +G+PCS+ M VCSH+N NYED+IED YKLS Y + Y+PQFQ IPHEDYWI  P  PIL
Subjt:  DRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPIL

Query:  YADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
        + D  LLR PGRP+SSR HNEM  RE S+QQR  LCNQLGHNQRSCP R+REA
Subjt:  YADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

TrEMBL top hitse value%identityAlignment
A0A1S3C4P2 uncharacterized protein LOC1034969911.3e-6867.43Show/hide
Query:  RYAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCY
        RYA +KI+KW+ RS+K EV SYDRS G+FHVKTG H  N+K GN+Q  RL+A E YCSCNKWQ FGIPCSHFMAVCS  N+NYEDF+EDYYK+ TY  CY
Subjt:  RYAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCY

Query:  SPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
        +PQFQP+PHEDYWITP   P+L +DP LLR+ GR KSSRYHNEM W E S QQRC  C+QLGHN+  C   +R+A
Subjt:  SPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

A0A5A7T1X8 SWIM-type domain-containing protein1.4e-7868.53Show/hide
Query:  MSFFSNIGIEKWTQSHDGGVR--YAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSH
        MSFF +I IEKWTQ+HDGG R  YA  KI+KW+ RS+K EV SYDRS G+FHVKT  H  N+KGGN+Q  RL+A E YCSCNKWQ FGIPCSHFMAVCS 
Subjt:  MSFFSNIGIEKWTQSHDGGVR--YAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSH

Query:  MNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
         N+NYEDF+EDYYK+STY  CY+ QFQP+PHEDYWITP   P+L  DP LLR+ GRPK+SRYHNEM W E S QQRC  C+QLGHN+RSC   +R+A
Subjt:  MNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

A0A5A7TD93 SWIM-type domain-containing protein1.2e-6951.98Show/hide
Query:  MSFFSNIGIEKWTQSHDGGVR---------------------------------------------------------YAHDKIVKWATRSNKLEVLSYD
        MSFF +I I+KWTQ+HDGG +                                                         YA +KI+KW+ RS+K EV SYD
Subjt:  MSFFSNIGIEKWTQSHDGGVR---------------------------------------------------------YAHDKIVKWATRSNKLEVLSYD

Query:  RSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY
        RS G+FHVKTG H  N+K GN+Q  RL+A E YCSCNKWQ FGIPCSHFMAVCS  N+NYEDF+EDYYK+ TY  CY+PQFQP+PHEDYWITP   P+L 
Subjt:  RSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY

Query:  ADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
        +DP LLR+ GR KSSRYHNEM W E S QQRC  C+QLGHN+  C   +R+A
Subjt:  ADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

A0A5D3BR89 SWIM-type domain-containing protein1.2e-6951.98Show/hide
Query:  MSFFSNIGIEKWTQSHDGGVR---------------------------------------------------------YAHDKIVKWATRSNKLEVLSYD
        MSFF +I I+KWTQ+HDGG +                                                         YA +KI+KW+ RS+K EV SYD
Subjt:  MSFFSNIGIEKWTQSHDGGVR---------------------------------------------------------YAHDKIVKWATRSNKLEVLSYD

Query:  RSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY
        RS G+FHVKTG H  N+K GN+Q  RL+A E YCSCNKWQ FGIPCSHFMAVCS  N+NYEDF+EDYYK+ TY  CY+PQFQP+PHEDYWITP   P+L 
Subjt:  RSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY

Query:  ADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
        +DP LLR+ GR KSSRYHNEM W E S QQRC  C+QLGHN+  C   +R+A
Subjt:  ADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

A0A6J1CRF1 uncharacterized protein LOC1110135024.5e-6952.96Show/hide
Query:  MSFFSNIGIEKWTQSHDGG----------------------------------------------------------VRYAHDKIVKWATRSNKLEVLSY
        M+FF NI IEKWT SHDGG                                                           RYA+DK+V+WA RS K  V+SY
Subjt:  MSFFSNIGIEKWTQSHDGG----------------------------------------------------------VRYAHDKIVKWATRSNKLEVLSY

Query:  DRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPIL
        DR  GVFHVKTG HY+N+KGGN Q  R+TA+E  C+CNKWQ +G+PCS+ M VCSH+N NYED+IED YKLS Y + Y+PQFQ IPHEDYWI  P  PIL
Subjt:  DRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPIL

Query:  YADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA
        + D  LLR PGRP+SSR HNEM  RE S+QQR  LCNQLGHNQRSCP R+REA
Subjt:  YADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase4.4e-0829Show/hide
Query:  CSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILYADPKLLR---EPGRPKSSRYHNEMGWRESSIQQ
        C+C ++Q    PC H +AVC  + +N   +++D Y +  Y + YS +F P+P    W      P  Y  P L+    EP  PK S    E    +  +++
Subjt:  CSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILYADPKLLR---EPGRPKSSRYHNEMGWRESSIQQ

AT1G64255.1 MuDR family transposase7.8e-0527.78Show/hide
Query:  CSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYW--------ITPPKFP
        C+C  +Q +  PC H +AVC  +  N   +++D Y L    + Y+  F  +P    W        + PP  P
Subjt:  CSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYW--------ITPPKFP

AT1G64260.1 MuDR family transposase2.4e-0628.36Show/hide
Query:  CSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY
        C+C K+Q++  PC H +AV   + +N   ++++ Y +  Y + Y+  F P+P    W    + P L+
Subjt:  CSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDYYKLSTYTQCYSPQFQPIPHEDYWITPPKFPILY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGGAGGGGTTAGGTACGCTCATGATAAGATCGTTAAATGGGCCACAAGATCAAATAAGCT
TGAGGTGTTGTCATATGATCGATCCACTGGTGTATTTCACGTGAAAACTGGGTTTCATTATTTCAATGCCAAAGGAGGGAATCTTCAGACTCGGAGGTTAACTGCAGATG
AACACTACTGTTCCTGCAATAAGTGGCAGAACTTTGGTATTCCATGTTCACATTTTATGGCAGTTTGCTCACACATGAATTTGAATTATGAAGATTTCATCGAGGATTAC
TATAAGCTTTCAACGTATACCCAGTGCTACTCTCCTCAGTTTCAACCCATCCCCCATGAAGATTACTGGATCACCCCTCCTAAATTCCCTATCCTATATGCTGACCCAAA
GTTGTTGAGAGAACCTGGTAGACCAAAAAGTTCTCGCTATCACAATGAGATGGGTTGGAGAGAGTCGAGTATCCAGCAACGATGTGACCTATGTAATCAACTTGGTCACA
ATCAAAGGAGTTGTCCTTATAGACAAAGAGAAGCACTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGGAGGGGTTAGGTACGCTCATGATAAGATCGTTAAATGGGCCACAAGATCAAATAAGCT
TGAGGTGTTGTCATATGATCGATCCACTGGTGTATTTCACGTGAAAACTGGGTTTCATTATTTCAATGCCAAAGGAGGGAATCTTCAGACTCGGAGGTTAACTGCAGATG
AACACTACTGTTCCTGCAATAAGTGGCAGAACTTTGGTATTCCATGTTCACATTTTATGGCAGTTTGCTCACACATGAATTTGAATTATGAAGATTTCATCGAGGATTAC
TATAAGCTTTCAACGTATACCCAGTGCTACTCTCCTCAGTTTCAACCCATCCCCCATGAAGATTACTGGATCACCCCTCCTAAATTCCCTATCCTATATGCTGACCCAAA
GTTGTTGAGAGAACCTGGTAGACCAAAAAGTTCTCGCTATCACAATGAGATGGGTTGGAGAGAGTCGAGTATCCAGCAACGATGTGACCTATGTAATCAACTTGGTCACA
ATCAAAGGAGTTGTCCTTATAGACAAAGAGAAGCACTGTTGTGA
Protein sequenceShow/hide protein sequence
MSFFSNIGIEKWTQSHDGGVRYAHDKIVKWATRSNKLEVLSYDRSTGVFHVKTGFHYFNAKGGNLQTRRLTADEHYCSCNKWQNFGIPCSHFMAVCSHMNLNYEDFIEDY
YKLSTYTQCYSPQFQPIPHEDYWITPPKFPILYADPKLLREPGRPKSSRYHNEMGWRESSIQQRCDLCNQLGHNQRSCPYRQREALL