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Lag0022932 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022932
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr7:41176591..41177142
RNA-Seq ExpressionLag0022932
SyntenyLag0022932
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]4.7e-3851.48Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M +YLS+ +  L +F K+E+RQI R+QN N ++LARL TTYET+L RTVPVE+L  P+I  +EA+ +D+Q                       +W   L+
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR
        KYL+ G LPT++ EA++LQ+RA+ YVL++  LYKRGYSLP+LKCL P E +YVMREIHEGVCG+HS AR
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]2.7e-3344.97Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M  YL+KA+ LLA+F+ + +RQ+ RS+N+N + LARL + Y+T+L RTVPVE+L + ++   E + +           T A+           +WMDP+ 
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR
         +L  G +P D ++A++L+R+A+HY+++EG+L+KRGYSLP+L+CL P E  YVMREIHEGVCGNH  A+
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR

XP_022157610.1 uncharacterized protein LOC111024267 [Momordica charantia]1.7e-3244.38Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M +YLSK +  LA+FK +EV Q+ R +N+N+++LA+L + YET+L R++PVE+L  P+I                      E  +++ D     WMDP++
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR
        +++ KG+ P D  E K++ RRA+ +VLR+G LY RG+SLP+LKC  P E  Y++REIHEGVCGNHSR R
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]5.7e-3650.3Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M +YLS+ +  L +F K+E+RQI  +QN N + LARL   YET+L RTVPVE+L  P+I  +EA+ +D Q                       +W  PL+
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR
        KYL+ G LPT++ EA++LQRRA+ YVL++  LYK GYSLP+LKCL P E +YVMREIHEGVCG+HS AR
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]2.7e-3349.09Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M +YLS+ K+ L +F KFE+RQI  +QN N ++LARL   Y T+L RT+ VE+L +P+I  +E + +DEQ       R   E           +WM  L+
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNH
        KYL+ G LP +  E ++LQR+A+ YVL++  LYKRGYSLP+LKCL   E +YVMREIHEGVCGNH
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNH

TrEMBL top hitse value%identityAlignment
A0A6J1DJC7 Ribonuclease H2.3e-3851.48Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M +YLS+ +  L +F K+E+RQI R+QN N ++LARL TTYET+L RTVPVE+L  P+I  +EA+ +D+Q                       +W   L+
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR
        KYL+ G LPT++ EA++LQ+RA+ YVL++  LYKRGYSLP+LKCL P E +YVMREIHEGVCG+HS AR
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR

A0A6J1DTK4 uncharacterized protein LOC1110242678.3e-3344.38Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M +YLSK +  LA+FK +EV Q+ R +N+N+++LA+L + YET+L R++PVE+L  P+I                      E  +++ D     WMDP++
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR
        +++ KG+ P D  E K++ RRA+ +VLR+G LY RG+SLP+LKC  P E  Y++REIHEGVCGNHSR R
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR

A0A6J1DWM2 Ribonuclease H1.3e-3344.97Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M  YL+KA+ LLA+F+ + +RQ+ RS+N+N + LARL + Y+T+L RTVPVE+L + ++   E + +           T A+           +WMDP+ 
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR
         +L  G +P D ++A++L+R+A+HY+++EG+L+KRGYSLP+L+CL P E  YVMREIHEGVCGNH  A+
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR

A0A6J1DZU0 Ribonuclease H2.8e-3650.3Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M +YLS+ +  L +F K+E+RQI  +QN N + LARL   YET+L RTVPVE+L  P+I  +EA+ +D Q                       +W  PL+
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR
        KYL+ G LPT++ EA++LQRRA+ YVL++  LYK GYSLP+LKCL P E +YVMREIHEGVCG+HS AR
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRAR

A0A6J1E1Q5 uncharacterized protein LOC1110256231.3e-3349.09Show/hide
Query:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM
        M +YLS+ K+ L +F KFE+RQI  +QN N ++LARL   Y T+L RT+ VE+L +P+I  +E + +DEQ       R   E           +WM  L+
Subjt:  MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLM

Query:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNH
        KYL+ G LP +  E ++LQR+A+ YVL++  LYKRGYSLP+LKCL   E +YVMREIHEGVCGNH
Subjt:  KYLEKGDLPTDRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAATATTTATCCAAAGCTAAAGAGTTATTGGCCAAGTTCAAAAAGTTTGAGGTTAGACAAATCCTGAGATCCCAAAATGCTAATATTAATTCATTAGCTCGTTT
GACAACAACTTACGAAACAGAACTGAATAGAACAGTTCCAGTTGAGGTTTTGTTCAAGCCAACAATATGTGGAAAAGAGGCAGTAGTGGTAGATGAACAAGTTTCCGTGG
GAGGTCGAGCCAGGACAGAAGCCGAAACCCCTGTGGTCGAGGCCGACCATGAGGGGGGCTCGTGGATGGATCCATTGATGAAATATCTGGAGAAAGGGGATCTACCTACA
GACAGAGCTGAAGCCAAGAGGTTACAGAGGCGAGCATCACATTATGTGCTGAGAGAGGGCAGGTTGTATAAACGAGGTTACTCGTTGCCAATGCTAAAGTGCCTTCCACC
TAGAGAAGTAGAATACGTGATGAGAGAAATACATGAAGGTGTGTGTGGTAATCATTCAAGGGCAAGGCCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGGT
GA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAATATTTATCCAAAGCTAAAGAGTTATTGGCCAAGTTCAAAAAGTTTGAGGTTAGACAAATCCTGAGATCCCAAAATGCTAATATTAATTCATTAGCTCGTTT
GACAACAACTTACGAAACAGAACTGAATAGAACAGTTCCAGTTGAGGTTTTGTTCAAGCCAACAATATGTGGAAAAGAGGCAGTAGTGGTAGATGAACAAGTTTCCGTGG
GAGGTCGAGCCAGGACAGAAGCCGAAACCCCTGTGGTCGAGGCCGACCATGAGGGGGGCTCGTGGATGGATCCATTGATGAAATATCTGGAGAAAGGGGATCTACCTACA
GACAGAGCTGAAGCCAAGAGGTTACAGAGGCGAGCATCACATTATGTGCTGAGAGAGGGCAGGTTGTATAAACGAGGTTACTCGTTGCCAATGCTAAAGTGCCTTCCACC
TAGAGAAGTAGAATACGTGATGAGAGAAATACATGAAGGTGTGTGTGGTAATCATTCAAGGGCAAGGCCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGGT
GA
Protein sequenceShow/hide protein sequence
MIEYLSKAKELLAKFKKFEVRQILRSQNANINSLARLTTTYETELNRTVPVEVLFKPTICGKEAVVVDEQVSVGGRARTEAETPVVEADHEGGSWMDPLMKYLEKGDLPT
DRAEAKRLQRRASHYVLREGRLYKRGYSLPMLKCLPPREVEYVMREIHEGVCGNHSRARPVGFYALKLVDSEW