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Lag0022934 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022934
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:41248747..41249118
RNA-Seq ExpressionLag0022934
SyntenyLag0022934
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_027093475.1 uncharacterized protein LOC113713864 [Coffea arabica]5.0e-2046.67Show/hide
Query:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL
        E+AC  I +IL+ YE  SGQ+INLEKS    S NV+  + RE+ + LG     T G+YLG+P   +R K  +   IKD + + M  WK+ L S+G KEVL
Subjt:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL

Query:  IKAIVQAIPIYAMSCYKLPD
        +KA+  A+P+Y MSC+KLP+
Subjt:  IKAIVQAIPIYAMSCYKLPD

XP_027181659.1 uncharacterized protein LOC113780035 [Coffea eugenioides]5.0e-2046.67Show/hide
Query:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL
        E+AC  I +IL+ YE  SGQ+INLEKS    S NV+  + RE+ + LG     T G+YLG+P   +R K  +   IKD + + M  WK+ L S+G KEVL
Subjt:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL

Query:  IKAIVQAIPIYAMSCYKLPD
        +KA+  A+P+Y MSC+KLP+
Subjt:  IKAIVQAIPIYAMSCYKLPD

XP_030479133.1 uncharacterized protein LOC115696372 [Cannabis sativa]7.8e-2143.7Show/hide
Query:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL
        +++C +I+  L +Y R SGQ +N +KSV   S N  +       ++LG+   +    YLG+P+ + RDKS L   IK+K+ K M  W D +FS G KEVL
Subjt:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL

Query:  IKAIVQAIPIYAMSCYKLP
        +KA+VQ+IP YAMSC++LP
Subjt:  IKAIVQAIPIYAMSCYKLP

XP_030509336.1 uncharacterized protein LOC115724021 [Cannabis sativa]5.0e-2044.54Show/hide
Query:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL
        +++C SI+  L +Y R SGQ +NL+KSV   S N           +LG+  +    +YLG+P+ + RDK  L   IK+++ K M  W D LFS G KEVL
Subjt:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL

Query:  IKAIVQAIPIYAMSCYKLP
        +KA+VQ+IP Y MSC+KLP
Subjt:  IKAIVQAIPIYAMSCYKLP

XP_042974740.1 uncharacterized protein LOC122306377 [Carya illinoinensis]7.8e-2143.22Show/hide
Query:  KACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLI
        + C +I+ +L +YER SGQ +N EK+  + SKNV  G  +E+ ++ G +H +   +YLG+P    R K      +K K+ + ++GWK+ L S+G KEVL+
Subjt:  KACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLI

Query:  KAIVQAIPIYAMSCYKLP
        KA+V AIP Y MSC+KLP
Subjt:  KAIVQAIPIYAMSCYKLP

TrEMBL top hitse value%identityAlignment
A0A2N9FNT0 RNase H domain-containing protein2.4e-2043.97Show/hide
Query:  CRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLIKA
        C+ I+EIL  YE+ SGQ +N  K+    SKN    K  E+ E+LGV   +   +YLG+PS   ++K +   +IK++V   ++GWK+ L S+  +E+LIKA
Subjt:  CRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLIKA

Query:  IVQAIPIYAMSCYKLP
        +VQAIP Y M+C+KLP
Subjt:  IVQAIPIYAMSCYKLP

A0A2N9G5C3 Uncharacterized protein2.0e-2250.44Show/hide
Query:  IREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLIKAIVQ
        ++ ILK+YER SGQ IN EK+ F  SKN  V    E+  M G        +YLG+PS   R K     +IKD++ K +QGWK+ L S+  +E+LIKA+VQ
Subjt:  IREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLIKAIVQ

Query:  AIPIYAMSCYKLP
        AIPIYAMSC+KLP
Subjt:  AIPIYAMSCYKLP

A0A6P6U810 uncharacterized protein LOC1137084773.2e-2042.74Show/hide
Query:  RSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLIKAI
        R I++IL++Y+  SGQ INLEKS  + S N +    +++++ L +K      +YLG+P+   R K  +   IKD++ + +QGW +   S+G KEVL+KA+
Subjt:  RSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLIKAI

Query:  VQAIPIYAMSCYKLPDN
        VQAIP Y+MSC+K PD+
Subjt:  VQAIPIYAMSCYKLPDN

A0A6P6URN7 uncharacterized protein LOC1137138642.4e-2046.67Show/hide
Query:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL
        E+AC  I +IL+ YE  SGQ+INLEKS    S NV+  + RE+ + LG     T G+YLG+P   +R K  +   IKD + + M  WK+ L S+G KEVL
Subjt:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL

Query:  IKAIVQAIPIYAMSCYKLPD
        +KA+  A+P+Y MSC+KLP+
Subjt:  IKAIVQAIPIYAMSCYKLPD

A0A803QGT2 Uncharacterized protein3.8e-2143.7Show/hide
Query:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL
        +++C +I+  L +Y R SGQ +N +KSV   S N  +       ++LG+   +    YLG+P+ + RDKS L   IK+K+ K M  W D +FS G KEVL
Subjt:  EKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVL

Query:  IKAIVQAIPIYAMSCYKLP
        +KA+VQ+IP YAMSC++LP
Subjt:  IKAIVQAIPIYAMSCYKLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGCCTGCAGGAGTATCAGAGAAATTCTTAAGGTGTATGAGCGGACGTCGGGTCAAACGATTAACCTTGAGAAATCAGTGTTCATGGCTAGCAAGAATGTCGA
GGTTGGGAAGACTCGAGAGCTGAGTGAGATGTTGGGAGTAAAGCATACCAAGACTATTGGGCAATATCTCGGAATGCCTTCACAGAACTCTCGAGATAAAAGTTCTCTTT
CCAAAAAGATCAAGGATAAGGTTGGAAAAGCAATGCAAGGTTGGAAGGATGGGCTATTCTCTGAAGGGGATAAAGAAGTTCTTATCAAAGCTATCGTTCAAGCAATACCC
ATATATGCTATGTCCTGTTATAAGCTTCCTGATAACTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGCCTGCAGGAGTATCAGAGAAATTCTTAAGGTGTATGAGCGGACGTCGGGTCAAACGATTAACCTTGAGAAATCAGTGTTCATGGCTAGCAAGAATGTCGA
GGTTGGGAAGACTCGAGAGCTGAGTGAGATGTTGGGAGTAAAGCATACCAAGACTATTGGGCAATATCTCGGAATGCCTTCACAGAACTCTCGAGATAAAAGTTCTCTTT
CCAAAAAGATCAAGGATAAGGTTGGAAAAGCAATGCAAGGTTGGAAGGATGGGCTATTCTCTGAAGGGGATAAAGAAGTTCTTATCAAAGCTATCGTTCAAGCAATACCC
ATATATGCTATGTCCTGTTATAAGCTTCCTGATAACTCTTAG
Protein sequenceShow/hide protein sequence
MEKACRSIREILKVYERTSGQTINLEKSVFMASKNVEVGKTRELSEMLGVKHTKTIGQYLGMPSQNSRDKSSLSKKIKDKVGKAMQGWKDGLFSEGDKEVLIKAIVQAIP
IYAMSCYKLPDNS