CuGenDBv2

Gene ID	Lag0022939
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr7:41338531..41342409
RNA-Seq Expression	Lag0022939
Synteny	Lag0022939
Gene Ontology terms	NA
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

BBG98819.1 VIRB2-interacting protein 2 [Prunus dulcis]

2.5e-85

38.06

Show/hide

Query:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET
        G WP  YLGLPLGG+ +  +FW PV+E+++++L  WK + +SKGGR T+IQ+ L S+P YY+SLF++P  VA  ++KL+RDF WEG  G+   H V+WE 
Subjt:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET

Query:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL
            KF GG+G+G+   R++AL +KW+WRF +E +ALW + +I   Y  ++     K   RGS + PWR I S  +L        +G+G    FW D W 
Subjt:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL

Query:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS
          GVL E FPRL+ LS +    ++ F  S  L  +WD  FRRNLN+ E  E A L  LL  +R+     D   W  D S  FT  S    +    +    
Subjt:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS

Query:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------
          Y  +WK   P K+KIF+W+  LG +NT D LQRR PYL +SP WC +C    ++  HL +HC F+ + W T+         +P   +++         
Subjt:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------

Query:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI
            A +  G     V   LWL  N R+F  ++G+G    W R+
Subjt:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI

BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]

2.5e-85

38.06

Show/hide

Query:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET
        G WP  YLGLPLGG+ +  +FW PV+E+++++L  WK + +SKGGR T+IQ+ L S+P YY+SLF++P  VA  ++KL+RDF WEG  G+   H V+WE 
Subjt:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET

Query:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL
            KF GG+G+G+   R++AL +KW+WRF +E +ALW + +I   Y  ++     K   RGS + PWR I S  +L        +G+G    FW D W 
Subjt:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL

Query:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS
          GVL E FPRL+ LS +    ++ F  S  L  +WD  FRRNLN+ E  E A L  LL  +R+     D   W  D S  FT  S    +    +    
Subjt:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS

Query:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------
          Y  +WK   P K+KIF+W+  LG +NT D LQRR PYL +SP WC +C    ++  HL +HC F+ + W T+         +P   +++         
Subjt:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------

Query:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI
            A +  G     V   LWL  N R+F  ++G+G    W R+
Subjt:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.9e-86

41.05

Show/hide

Query:  SPGSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNW
        S  S P +YLG+PLGG+ K   FW  V E+IQ KL+NWKY+ ISKGGR TLI+STLSS+PTY LS+F+ PS   K+++K  R+F W+G+    G H +NW
Subjt:  SPGSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNW

Query:  ETTQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDS
              K  GG+GI   H  N ALL+KW+WR+L E  ALWR+LI  +Y       I P +I   + K+PWR I   +D   S     L NG    FW+ +
Subjt:  ETTQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDS

Query:  WLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKS----LMGDMVGDSDP
        W   G L  A+PRL+ LS   + TV D W ++++ W + FRR LND E N+WA +  +L   R        +W  DS N+F++ S    +   +   S  
Subjt:  WLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKS----LMGDMVGDSDP

Query:  TSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVLASIFV
          SKL  ++WK   P KIK F+W L    INT + +Q RMP + L PSWCV+C  D+E+  HLF+HC      WS + NAF  SLAL  +  + +     
Subjt:  TSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVLASIFV

Query:  GHPFHGVKKILWLALNRVF
         H F   +K+++  +  +F
Subjt:  GHPFHGVKKILWLALNRVF

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]

2.9e-86

38.51

Show/hide

Query:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET
        G WP  YLGLPLGG+ +  +FW PV+E+++++L  WK + +SKGGR T+IQ+ L S+P YY+SLF++P  VA  ++KL+RDF WEG  G+   H V+WE 
Subjt:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET

Query:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL
            KF GG+G+G+   R++AL +KW+WRF +E +ALW + +I   Y  ++     K   RGS + PWR I S  +L        +G+G    FW D W 
Subjt:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL

Query:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS
          GVL E FPRL+ LS +    ++ F  S  L  +WD  FRRNLN+ E  E A L  LL  +R+     D   W  D S  FT  SL   +    +  + 
Subjt:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS

Query:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------
          Y  +WK   P K+KIF+W+  LG +NT D LQRR PYL +SP WC +C    ++  HL +HC F+ + W T+         +P   +++         
Subjt:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------

Query:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI
            A I  G     V   LWL  N R+F  ++G+G    W R+
Subjt:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI

VVA39726.1 Hypothetical predicted protein, partial [Prunus dulcis]

6.5e-86

38.51

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Query:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET
        G WP  YLGLPLGG+ +  +FW PV+E+++++L  WK + +SKGGR T+IQ+ L S+P YY+SLF++P  VA  ++KL+RDF WEG  G+   H V+WE 
Subjt:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET

Query:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL
            KF GG+G+G+   R+  L +KW+WRF +E +ALW + +I   Y  ++     K   RGS +SPWR I S  +L        +G G    FW D W 
Subjt:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL

Query:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS
          GVL E FPRL+ LS +    ++ F  S  L  +WD  FRRNLN+ E  E A L  LL  +R+     D   W +D S  FT  SL   +    +    
Subjt:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS

Query:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------
          Y  +WK   P K+KIF+W+  LG +NT D LQRR PYL +SP WC +C    ++  HL +HC F+ + W T+         +P   +++         
Subjt:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------

Query:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI
            A I  G     V   LWL  N R+F  ++G+G    W R+
Subjt:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein

1.4e-86

41.05

Show/hide

Query:  SPGSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNW
        S  S P +YLG+PLGG+ K   FW  V E+IQ KL+NWKY+ ISKGGR TLI+STLSS+PTY LS+F+ PS   K+++K  R+F W+G+    G H +NW
Subjt:  SPGSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNW

Query:  ETTQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDS
              K  GG+GI   H  N ALL+KW+WR+L E  ALWR+LI  +Y       I P +I   + K+PWR I   +D   S     L NG    FW+ +
Subjt:  ETTQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDS

Query:  WLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKS----LMGDMVGDSDP
        W   G L  A+PRL+ LS   + TV D W ++++ W + FRR LND E N+WA +  +L   R        +W  DS N+F++ S    +   +   S  
Subjt:  WLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKS----LMGDMVGDSDP

Query:  TSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVLASIFV
          SKL  ++WK   P KIK F+W L    INT + +Q RMP + L PSWCV+C  D+E+  HLF+HC      WS + NAF  SLAL  +  + +     
Subjt:  TSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVLASIFV

Query:  GHPFHGVKKILWLALNRVF
         H F   +K+++  +  +F
Subjt:  GHPFHGVKKILWLALNRVF

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)

1.4e-86

38.51

Show/hide

Query:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET
        G WP  YLGLPLGG+ +  +FW PV+E+++++L  WK + +SKGGR T+IQ+ L S+P YY+SLF++P  VA  ++KL+RDF WEG  G+   H V+WE 
Subjt:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET

Query:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL
            KF GG+G+G+   R++AL +KW+WRF +E +ALW + +I   Y  ++     K   RGS + PWR I S  +L        +G+G    FW D W 
Subjt:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL

Query:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS
          GVL E FPRL+ LS +    ++ F  S  L  +WD  FRRNLN+ E  E A L  LL  +R+     D   W  D S  FT  SL   +    +  + 
Subjt:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS

Query:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------
          Y  +WK   P K+KIF+W+  LG +NT D LQRR PYL +SP WC +C    ++  HL +HC F+ + W T+         +P   +++         
Subjt:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------

Query:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI
            A I  G     V   LWL  N R+F  ++G+G    W R+
Subjt:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI

A0A5E4GJ11 Reverse transcriptase domain-containing protein (Fragment)

3.1e-86

38.51

Show/hide

Query:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET
        G WP  YLGLPLGG+ +  +FW PV+E+++++L  WK + +SKGGR T+IQ+ L S+P YY+SLF++P  VA  ++KL+RDF WEG  G+   H V+WE 
Subjt:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET

Query:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL
            KF GG+G+G+   R+  L +KW+WRF +E +ALW + +I   Y  ++     K   RGS +SPWR I S  +L        +G G    FW D W 
Subjt:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL

Query:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS
          GVL E FPRL+ LS +    ++ F  S  L  +WD  FRRNLN+ E  E A L  LL  +R+     D   W +D S  FT  SL   +    +    
Subjt:  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTSS

Query:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------
          Y  +WK   P K+KIF+W+  LG +NT D LQRR PYL +SP WC +C    ++  HL +HC F+ + W T+         +P   +++         
Subjt:  KLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL--------

Query:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI
            A I  G     V   LWL  N R+F  ++G+G    W R+
Subjt:  ----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI

M5WJI4 zf-RVT domain-containing protein

5.4e-86

37.75

Show/hide

Query:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET
        G+WP +YLGLPLGG+ +  +FW PV+E+++++L  WK + +SKGGR T+IQ+ L S+P YY+SLF++P  VA  ++KL+RDF WEG  G+   H V+WE 
Subjt:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET

Query:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL
            KF GG+G+G+   R+ AL +KW+WRF +E +ALW + +I   Y  ++     K   RGS +SPWR I S  +L        +G G    FW D W 
Subjt:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL

Query:  SCGVLSEAFPRLYRLSNRSEGTVADFWVSLNS---AWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTS
          GVL E FPRL+ LS +    ++ F   L+    +WD  FRRNLN+ E  E A L  LL  +R+     D   W +D    FT  S    +    +   
Subjt:  SCGVLSEAFPRLYRLSNRSEGTVADFWVSLNS---AWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTS

Query:  SKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL-------
           Y  +WK   P K+KIF+W+  LG +NT D LQRR PYL +SP WC +C    E+  H+ +HC F+ + W T+         +P   +++        
Subjt:  SKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL-------

Query:  -----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI
             A I  G     V   LW+  N R+F  ++G+G    W R+
Subjt:  -----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI

M5XTH8 zf-RVT domain-containing protein

4.9e-87

37.98

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Query:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET
        G+WP +YLGLPLGG+ +  +FW PV+E+++++L  WK + +SKGGR T+IQ+ L S+P YY+SLF++P  VA  ++KL+RDF WEG  G+   H V+WE 
Subjt:  GSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWET

Query:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL
            KF GG+G+G+   R+ AL  KW+WRF +E +ALW + +I   Y  ++     K   RGS +SPWR I S  +L       ++G G    FW D W 
Subjt:  TQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWL

Query:  SCGVLSEAFPRLYRLSNRSEGTVADFWVSLNS---AWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTS
          GVL E FPRL+ LS +    ++ F   L+    +WD  FRRNLN+ E  E A L  LL  +R+     D   W +D S  FT  S    +    +   
Subjt:  SCGVLSEAFPRLYRLSNRSEGTVADFWVSLNS---AWDLSFRRNLNDSETNEWASLSHLLSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSDPTS

Query:  SKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL-------
           Y  +WK   P K+KIF+W+  LG +NT D LQRR PYL +SP WC +C    E+  H+ +HC F+ + W T+         +P   +++        
Subjt:  SKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWSTIFNAFEWSLALPNNIYDVL-------

Query:  -----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI
             A I  G     V   LW+  N R+F  ++G+G    W R+
Subjt:  -----ASIFVGHPFHGVKKILWLALN-RVFLCHRGLGYK--WSRI

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

2.7e-34

27.45

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Query:  VIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWETTQLPKFMGGVGIGNFHHRNLALLS
        ++ER+  ++  W+   +S  GR TL ++ LSSMP + +S   LP  +   LD+L R F W  +  +   H V W     PK  GG+G+      N AL+S
Subjt:  VIERIQHKLHNWKYSFISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWETTQLPKFMGGVGIGNFHHRNLALLS

Query:  KWIWRFLHEDNALWRQLIIAQYYFSE---STCIWPKHIQRGSFKSPWRFICSTI-DLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSE
        K  WR L E N+LW  ++  +Y+  E   S  + PK    GS+ S WR I   + D+V+  +    G+G    FW D W+S   L E      R ++   
Subjt:  KWIWRFLHEDNALWRQLIIAQYYFSE---STCIWPKHIQRGSFKSPWRFICSTI-DLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSE

Query:  GTVADFWVSLNSAWDLS--FRRNLNDSETNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKSLMGDMVGDS--DPTSSKLYNVVWKDVYPKKIKIFI
            D W+     WD +       N++     A +  L++  R     D  SW       F+V+S    +  D    P  +  +N +WK   P+++K F+
Subjt:  GTVADFWVSLNSAWDLS--FRRNLNDSETNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKSLMGDMVGDS--DPTSSKLYNVVWKDVYPKKIKIFI

Query:  WELSLGAINTSDRLQRRMPYLHLSPS-WCVMCCSDAENTCHLFVHCSFASRYWSTIF-----------NAFEWSLALPNNIYDVLASIFVGHPFHGVKKI
        W +   A+ T +   RR    HLS S  C +C    E+  H+   C      W  +            + FEW       +YD L          G + I
Subjt:  WELSLGAINTSDRLQRRMPYLHLSPS-WCVMCCSDAENTCHLFVHCSFASRYWSTIF-----------NAFEWSLALPNNIYDVLASIFVGHPFHGVKKI

Query:  LWLALNRVFLCHRGLGYKW
         W  +  V +     G+KW
Subjt:  LWLALNRVFLCHRGLGYKW

Arabidopsis top hits

e value

%identity

Alignment

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.9e-07

24.48

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Query:  LGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS---LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRV---IDDTWSWPID---SS
        +G+G +  FWHD+W+  G L E    +  L  R+ G   D  V      ++W ++  R+ N         L +LL   +  +    DD++ W  D    S
Subjt:  LGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS---LNSAWDLSFRRNLNDSETNEWASLSHLLSSIRIRV---IDDTWSWPID---SS

Query:  NAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYW
        N F+       +   S   +   +  VW   +  K     W ++   ++T DRLQ    +    P+ C++C +  ++  HLF  C F+   W
Subjt:  NAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYW

AT4G29090.1 Ribonuclease H-like superfamily protein

3.0e-28

26.57

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Query:  SMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWETTQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIW
        ++PTY ++ F LP  V K +  ++ DF+W   +   GMH   W+     K  GG+G  +    NLALL K +WR L    +L  ++  ++Y+        
Subjt:  SMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWETTQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFSESTCIW

Query:  PKHIQRGSFKS-PWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSFRRNLNDSETNEWASLS
        P +   GS  S  W+ I ++ +++    +  +GNG   + W   WL     S A  R+ R+  +   +V+   + ++   D S R    D     +  + 
Subjt:  PKHIQRGSFKS-PWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSFRRNLNDSETNEWASLS

Query:  H-LLSSIRI--RVIDDTWSWPIDSSNAFTVKS---LMGDMVGD-------SDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLS-
          L+  +R   R I D+++W   SS  +TVKS   ++  ++         S+P+ + +Y  +WK     KI+ F+W+     ++ S  +   + Y HLS 
Subjt:  H-LLSSIRI--RVIDDTWSWPIDSSNAFTVKS---LMGDMVGD-------SDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLS-

Query:  PSWCVMCCSDAENTCHLFVHCSFASRYWS----TIFNAFEWSLALPNNIY
         S C+ C S  E   HL   C+FA   W+     I    EW+ ++  N+Y
Subjt:  PSWCVMCCSDAENTCHLFVHCSFASRYWS----TIFNAFEWSLALPNNIY

Sequences

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CDS sequence

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ATGCGATTTAAGCGGCTGTACACTCCGCTCCTTCCTGCGATTTCAGTAGTGTCAATCGGCGAAAGCCCACGCGTACAGCTCCACTCTCCGGCGTCCTCCAGGAGCTGCGC
CGACCACACGAACAACGCTCTACAGCGTGCATATCCCCTGCCCCACTTGTTTTCTTTGAGTTTCAGCGCTGACCCACTTGGTTTTGGACATCAAACATCTCCGGGTTCAT
GGCCTTCCACATATTTGGGGCTTCCTTTGGGAGGTAGTTCGAAAGGTTCTCAGTTTTGGCAGCCTGTTATTGAAAGAATCCAACATAAGCTTCATAACTGGAAATACTCT
TTTATTTCCAAAGGTGGTAGGCACACCCTCATCCAATCTACTCTCTCAAGTATGCCCACATATTACTTATCCTTATTTAAATTACCTTCTAAGGTTGCAAAATCTCTGGA
TAAGCTTATTCGAGATTTTTTTTGGGAGGGCTCCAGAGGCGAGGGCGGCATGCATAATGTAAATTGGGAGACAACTCAGCTTCCAAAATTTATGGGTGGAGTAGGCATTG
GAAATTTCCATCACCGTAATTTGGCTCTCTTATCAAAATGGATTTGGAGGTTTTTACATGAAGATAATGCCCTTTGGCGCCAACTTATTATTGCTCAATATTATTTCTCA
GAATCAACTTGTATTTGGCCTAAACATATTCAGAGAGGATCTTTTAAATCTCCTTGGCGCTTTATTTGTTCTACCATAGATCTTGTTGCTAGTCGTATTCAGAGACGGCT
TGGAAATGGTTGTTCCACCCTTTTTTGGCATGATTCTTGGCTAAGTTGTGGAGTCTTGTCTGAGGCTTTCCCTCGTCTTTATAGATTATCTAATCGCTCGGAAGGTACAG
TTGCTGACTTTTGGGTTTCATTGAATTCGGCTTGGGATTTGAGTTTTCGTCGAAATTTAAATGATTCGGAGACAAATGAGTGGGCTAGTCTCTCTCATCTGCTTTCTTCC
ATCAGAATTCGAGTTATTGATGACACTTGGTCTTGGCCTATTGATTCGTCTAATGCATTCACAGTTAAATCTCTTATGGGAGATATGGTTGGTGATTCTGACCCCACATC
GAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATCCAAAGAAGATCAAAATTTTTATCTGGGAGCTTAGTCTTGGAGCTATTAATACGTCTGATCGACTTCAAAGGC
GAATGCCTTATTTGCACCTTTCTCCATCCTGGTGTGTTATGTGTTGTTCTGATGCTGAAAATACTTGTCATCTATTTGTGCATTGCTCCTTTGCTTCCCGTTATTGGTCT
ACAATCTTCAATGCCTTTGAGTGGTCCTTGGCTCTACCAAACAACATTTATGATGTTCTTGCTTCCATTTTTGTGGGACATCCCTTCCATGGTGTGAAGAAGATCCTTTG
GCTTGCTCTTAACCGGGTCTTCCTCTGTCATCGAGGCCTTGGGTATAAATGGTCGAGGATCGATCGAATGCCGAGCTTCATAGAGAAGCGTCAAGGCCCTAAGTATAAAT
GGTCAAGGTTCGATGCAAAAGGAGCAAACCCTCCTGTCCCTCTAGTGATTCCCTGGATGATTCTCATGCTAGAGACGCTTCAAACATTGTTTGATAACATGACAGAAGGT
CATTACGACCGAGCAATAGGTTGCAAAGCTGGAGTCGATGTTCAACTATCTAAATTACAAGGACCGCTTCAAGGTTAG

mRNA sequence

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Protein sequence

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MRFKRLYTPLLPAISVVSIGESPRVQLHSPASSRSCADHTNNALQRAYPLPHLFSLSFSADPLGFGHQTSPGSWPSTYLGLPLGGSSKGSQFWQPVIERIQHKLHNWKYS
FISKGGRHTLIQSTLSSMPTYYLSLFKLPSKVAKSLDKLIRDFFWEGSRGEGGMHNVNWETTQLPKFMGGVGIGNFHHRNLALLSKWIWRFLHEDNALWRQLIIAQYYFS
ESTCIWPKHIQRGSFKSPWRFICSTIDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSFRRNLNDSETNEWASLSHLLSS
IRIRVIDDTWSWPIDSSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTSDRLQRRMPYLHLSPSWCVMCCSDAENTCHLFVHCSFASRYWS
TIFNAFEWSLALPNNIYDVLASIFVGHPFHGVKKILWLALNRVFLCHRGLGYKWSRIDRMPSFIEKRQGPKYKWSRFDAKGANPPVPLVIPWMILMLETLQTLFDNMTEG
HYDRAIGCKAGVDVQLSKLQGPLQG

Lag0022939 (gene) of Sponge gourd (AG-4) v1 genome