; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022942 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022942
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr7:41406584..41412770
RNA-Seq ExpressionLag0022942
SyntenyLag0022942
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030923408.1 uncharacterized protein LOC115950338 [Quercus lobata]8.6e-1942.54Show/hide
Query:  QKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLF
        +K PQ  A       V   I+D   LK PEK++ DP++RNKNKYC FHRDHGH T EC  L+ +I+ LIR+G LK FVG DR+   L     +    PL 
Subjt:  QKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLF

Query:  EIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
        EI+ I+GG+        G+   S++ Y  A+ N+
Subjt:  EIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

XP_030924801.1 uncharacterized protein LOC115951796 [Quercus lobata]5.1e-1945.38Show/hide
Query:  VFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLFEIQTILGGSSEEGGA
        VF  I+D   LK PEK++ DP++RNKNKYC FHRDHGH T EC  L+ +I+ LIR+G LK FVG DR+   L     +    PL EI+ I+GG+      
Subjt:  VFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLFEIQTILGGSSEEGGA

Query:  AHGEQKMSRECYFMALGNI
          G+   S++ Y  A+ N+
Subjt:  AHGEQKMSRECYFMALGNI

XP_030936482.1 uncharacterized protein LOC115961685 [Quercus lobata]8.6e-1942.54Show/hide
Query:  QKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLF
        +K PQ  A       V   I+D   LK PEK++ DP++RNKNKYC FHRDHGH T EC  L+ +I+ LIR+G LK FVG DR+   L     +    PL 
Subjt:  QKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLF

Query:  EIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
        EI+ I+GG+        G+   S++ Y  A+ N+
Subjt:  EIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

XP_030958630.1 uncharacterized protein LOC115980537 [Quercus lobata]8.6e-1942.54Show/hide
Query:  QKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLF
        +K PQ  A       V   I+D   LK PEK++ DP++RNKNKYC FHRDHGH T EC  L+ +I+ LIR+G LK FVG DR+   L     +    PL 
Subjt:  QKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLF

Query:  EIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
        EI+ I+GG+        G+   S++ Y  A+ N+
Subjt:  EIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

XP_030964291.1 uncharacterized protein LOC115985489 [Quercus lobata]5.1e-1943.28Show/hide
Query:  QKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLF
        +K PQ  A       V   I+D   LK PEK++ DP++RNKNKYC FHRDHGH T EC  L+ +IK LIR+G L+ FVG DR    L     +    PL 
Subjt:  QKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLF

Query:  EIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
        EI+ I+GG+S       G+   S++ Y  A+ N+
Subjt:  EIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

TrEMBL top hitse value%identityAlignment
A0A2N9IW26 Reverse transcriptase5.6e-1639.31Show/hide
Query:  RAEAQSQKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPL--PADQG
        R EA+ +K     A    +      IQD   L+ P K+RSDP+ R KN YC FHRDHGH T EC+ L+++I+ LIR+G L+ +V    + RP   PA + 
Subjt:  RAEAQSQKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPL--PADQG

Query:  KGGAN---PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
        +   N   P+ EI+TI+GG      A+ G  + SR+ Y   + NI
Subjt:  KGGAN---PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

A0A2N9J908 Retrotrans_gag domain-containing protein3.7e-1532.98Show/hide
Query:  NREATISDQHQEDKGKRCRAEDVGQIRHEYSSANGRGRAEAQSQKG-PQKFAAKD-SVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHAT
        +R+   S + +E + +R  +      + +YS  + +    +  Q G P+ F   + S+  V   IQD    K PEKLRS P RR+K+ YC FHRDHGH T
Subjt:  NREATISDQHQEDKGKRCRAEDVGQIRHEYSSANGRGRAEAQSQKG-PQKFAAKD-SVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHAT

Query:  RECIQLRDEIKALIREGYLKGFVGNDRSK-RPLPADQGKG-----GANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK
         +C  L+++I+ALIR+G LK FV  D  + RP   ++ K        + + EI+TI+GG +  G +   ++  +R+ + +++    RK
Subjt:  RECIQLRDEIKALIREGYLKGFVGNDRSK-RPLPADQGKG-----GANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRK

A0A6J1DWY0 uncharacterized protein LOC1110252932.8e-1538.52Show/hide
Query:  RAEAQSQKGPQKFAAKDS-----VGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPA
        + +  SQK P +   K +     +  V   I+D  LLK PE++++   +R+K +YC+FHRDHGHAT++C  L++E++ LIR GYLK +V     + P   
Subjt:  RAEAQSQKGPQKFAAKDS-----VGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPA

Query:  DQGKGGANPLFEIQTILGGSSE
          G+   +P  EI+TI+GG  E
Subjt:  DQGKGGANPLFEIQTILGGSSE

A0A6J1DXB1 uncharacterized protein LOC1110254122.1e-1849.07Show/hide
Query:  LLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLFEIQTILGGSSEEG-GAAHGEQKMS
        LLKRPEKL+ DP+RRNK+KYC FHR+HGH T  C +L+ +I+ LI++GY K FVG  RS   +P+            +  +L  S+  G G   GEQK S
Subjt:  LLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLFEIQTILGGSSEEG-GAAHGEQKMS

Query:  RECYFMAL
        RECY  AL
Subjt:  RECYFMAL

A0A6J1DZ52 uncharacterized protein LOC1110256125.6e-1646.39Show/hide
Query:  VFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLFEIQTILGGSSEE
        V   I+D  LLK PE +++ P++R+K +YC+FHRDHGHAT +C  L++E++ LIR+GYLK +V +D    P   +  K   +P  EI+TI+GGS+E+
Subjt:  VFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHRDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLFEIQTILGGSSEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGGCTCGCCGAAACCTCGTCAGAATCTCGTCGGAAAAGCTTGGATTTGATAATTTTGGAGGTTTCAAGTGTGGGCAGTTTAAAAACGAGTATGGTAACGTGGC
CAGGTCGCAGGGGAATGTTGGGGCCTTAAGTGCCGAATCCAGATTCCGAATCCTGGGCCTAGGGCGTTACAGATGGTATCAGAGTGGAACCTCTCCCATTGCTCTGCTAT
GCATGGGGATTCGACCTATGCATAGTATGAGTAGTTTTGCTCTGCTATGCGTATTGAGACTACTCTGCGCTAGTTTGACCAGTTTTCAGTTTAGTTGGGATCTATTGTCA
GCATGCCACGTCATAGGTTTGGTAAGTTGGACCATAAACAAGTTGTTCATTAGAGGAGCACTGATACTTAAGGAAACGGAGGTAATTTTGGACCACCACAGCGTACGAGG
AGCTGACAGGACAACCGGGAGGAGATATGATCAGGAAAGGGACCCAGAGGGAGACCATACCGACGGGCCGGGCCAACGTGGCCCGACCACTCGGTCCGTTTGCACGGGCC
GAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAATGCCTCCAAACCCTAGGAGTCCGAGCAGGTATTTATACCCC
TCTTCGCCATCGAAGAAGGAGGCCGAAAACTCGATTCTTGACTTCTTTCTCTATTCGCTAGCTGCTCAGTTTCCTGACTTAGGCATCGGAGGCGATGTGGCCTACACCAC
ACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGTTGGCACTGTCTGTGGGGAAGAATGCTTGCCAGTTCGGATCGCACATCGGTGGTGGTCTGCAGGATGGATCGGGTTC
AGAAACCAGAGGGAAGCCTCGGGTATGAGCAGAAAGCGCCGAGCCAGACTGGGGTCGACCTCGGTATGGAAAAGGCCGACCCTAACTTCGGAGGCTGTTGTAAGGATCCG
CGTGCCCACGATGTTATGGACCTAACCCAGGAGGACAACCAGCAGAAGGAGAGAGAGAACCGGGAAGCTACTATATCCGACCAACATCAAGAAGACAAAGGAAAAAGATG
TCGGGCAGAAGATGTAGGCCAGATCCGACATGAGTACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCCCAATCGCAAAAAGGCCCGCAGAAGTTCGCCGCTAAAGACA
GCGTCGGGTACGTCTTTGCCGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGATCAGACCCCGACAGGAGGAACAAAAACAAATACTGCATGTTCCAC
AGAGACCACGGTCACGCAACCCGGGAATGCATACAATTGAGGGACGAGATAAAAGCCCTAATCCGAGAAGGTTACCTCAAGGGGTTCGTGGGGAACGACAGAAGCAAGAG
GCCACTGCCAGCAGATCAAGGTAAGGGCGGTGCCAACCCACTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAA
TGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCCC
TTTCCAATGAAACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGGCTCGCCGAAACCTCGTCAGAATCTCGTCGGAAAAGCTTGGATTTGATAATTTTGGAGGTTTCAAGTGTGGGCAGTTTAAAAACGAGTATGGTAACGTGGC
CAGGTCGCAGGGGAATGTTGGGGCCTTAAGTGCCGAATCCAGATTCCGAATCCTGGGCCTAGGGCGTTACAGATGGTATCAGAGTGGAACCTCTCCCATTGCTCTGCTAT
GCATGGGGATTCGACCTATGCATAGTATGAGTAGTTTTGCTCTGCTATGCGTATTGAGACTACTCTGCGCTAGTTTGACCAGTTTTCAGTTTAGTTGGGATCTATTGTCA
GCATGCCACGTCATAGGTTTGGTAAGTTGGACCATAAACAAGTTGTTCATTAGAGGAGCACTGATACTTAAGGAAACGGAGGTAATTTTGGACCACCACAGCGTACGAGG
AGCTGACAGGACAACCGGGAGGAGATATGATCAGGAAAGGGACCCAGAGGGAGACCATACCGACGGGCCGGGCCAACGTGGCCCGACCACTCGGTCCGTTTGCACGGGCC
GAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAATGCCTCCAAACCCTAGGAGTCCGAGCAGGTATTTATACCCC
TCTTCGCCATCGAAGAAGGAGGCCGAAAACTCGATTCTTGACTTCTTTCTCTATTCGCTAGCTGCTCAGTTTCCTGACTTAGGCATCGGAGGCGATGTGGCCTACACCAC
ACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGTTGGCACTGTCTGTGGGGAAGAATGCTTGCCAGTTCGGATCGCACATCGGTGGTGGTCTGCAGGATGGATCGGGTTC
AGAAACCAGAGGGAAGCCTCGGGTATGAGCAGAAAGCGCCGAGCCAGACTGGGGTCGACCTCGGTATGGAAAAGGCCGACCCTAACTTCGGAGGCTGTTGTAAGGATCCG
CGTGCCCACGATGTTATGGACCTAACCCAGGAGGACAACCAGCAGAAGGAGAGAGAGAACCGGGAAGCTACTATATCCGACCAACATCAAGAAGACAAAGGAAAAAGATG
TCGGGCAGAAGATGTAGGCCAGATCCGACATGAGTACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCCCAATCGCAAAAAGGCCCGCAGAAGTTCGCCGCTAAAGACA
GCGTCGGGTACGTCTTTGCCGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGATCAGACCCCGACAGGAGGAACAAAAACAAATACTGCATGTTCCAC
AGAGACCACGGTCACGCAACCCGGGAATGCATACAATTGAGGGACGAGATAAAAGCCCTAATCCGAGAAGGTTACCTCAAGGGGTTCGTGGGGAACGACAGAAGCAAGAG
GCCACTGCCAGCAGATCAAGGTAAGGGCGGTGCCAACCCACTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAA
TGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCCC
TTTCCAATGAAACGTTGA
Protein sequenceShow/hide protein sequence
MSSARRNLVRISSEKLGFDNFGGFKCGQFKNEYGNVARSQGNVGALSAESRFRILGLGRYRWYQSGTSPIALLCMGIRPMHSMSSFALLCVLRLLCASLTSFQFSWDLLS
ACHVIGLVSWTINKLFIRGALILKETEVILDHHSVRGADRTTGRRYDQERDPEGDHTDGPGQRGPTTRSVCTGRVRLPPLGPYRFQLPRSSLLRPRMPPNPRSPSRYLYP
SSPSKKEAENSILDFFLYSLAAQFPDLGIGGDVAYTTPVSSDSCWSCSWHCLWGRMLASSDRTSVVVCRMDRVQKPEGSLGYEQKAPSQTGVDLGMEKADPNFGGCCKDP
RAHDVMDLTQEDNQQKERENREATISDQHQEDKGKRCRAEDVGQIRHEYSSANGRGRAEAQSQKGPQKFAAKDSVGYVFAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFH
RDHGHATRECIQLRDEIKALIREGYLKGFVGNDRSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSALGDGRGRAFEGSSYP
FPMKR