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Lag0022949 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022949
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:41488774..41492441
RNA-Seq ExpressionLag0022949
SyntenyLag0022949
Gene Ontology termsGO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0018024 - histone-lysine N-methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU41436.1 hypothetical protein TSUD_98320 [Trifolium subterraneum]6.0e-0464.86Show/hide
Query:  ELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        EL +RHA LL+ EE+YWKQR++ +WLK GD NTR+FH
Subjt:  ELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

TXG53039.1 hypothetical protein EZV62_022208 [Acer yangbiense]3.5e-0460.87Show/hide
Query:  SPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        SP  +  I  +EK    LL +EE YWKQRSRENWLK GD+NTR+FH
Subjt:  SPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

XP_022158772.1 uncharacterized protein LOC111025237 [Momordica charantia]3.8e-0662.22Show/hide
Query:  PIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        P+ FT+IH++E   A LL  EE +WKQRSRE+WLKWGD N +WFH
Subjt:  PIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

XP_030505068.1 uncharacterized protein LOC115720043 [Cannabis sativa]1.6e-0454.9Show/hide
Query:  NTLNTSPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        N+L+TS  HF  + + E    DLL  EE YW+QRSR +WLK GD NTR+FH
Subjt:  NTLNTSPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

TrEMBL top hitse value%identityAlignment
A0A2Z6NCM6 Uncharacterized protein2.9e-0464.86Show/hide
Query:  ELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        EL +RHA LL+ EE+YWKQR++ +WLK GD NTR+FH
Subjt:  ELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

A0A5C7H8J3 Uncharacterized protein1.7e-0460.87Show/hide
Query:  SPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        SP  +  I  +EK    LL +EE YWKQRSRENWLK GD+NTR+FH
Subjt:  SPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

A0A6J1DY29 uncharacterized protein LOC1110252371.8e-0662.22Show/hide
Query:  PIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        P+ FT+IH++E   A LL  EE +WKQRSRE+WLKWGD N +WFH
Subjt:  PIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

A0A803PJR1 Uncharacterized protein1.7e-0450.91Show/hide
Query:  KITYNTLNTSPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        KI   + NT PI++  + E+E+++  LL  EEK+WKQRSR  WL  GDRNT +FH
Subjt:  KITYNTLNTSPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

A0A803Q027 Uncharacterized protein7.7e-0554.9Show/hide
Query:  NTLNTSPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH
        N+L+TS  HF  + + E    DLL  EE YW+QRSR +WLK GD NTR+FH
Subjt:  NTLNTSPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGAGGAGCTGACGAGGACAACCGGGGAGAAATCGGGCTGGGATACGGACCAAAGAGGCGGAGCCGGCAAGTGGGACGGGCCAAGGCCGAAGGGGTCGGGTTTTTG
GCCCGACCCCCTGCTCGGCCTCAGCCCAAGGCCCGTTCGGTCTCGTCTGGTCCCCACCGCCTCTGGCTGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATCC
CTAAAAACCCTAGGAGGATGAGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTCTAGGATTCTGAATTCGGATTCGGCACTT
AAGGGCCCCGACATTCCCCTGCGACCCGGCCACGAAACTGAGAAAGACGTGACCTGCAAGACCAGCAAAAACCGCTGCACACCGGCGTGGTGTAGGCCACACCGCCTCCG
ATGCCTAAGTCAGAAAACCGAGGAGAAGCTACAGATAGTAAAGGGGAGAGTCCAGAATCGAGTTTCGGAACCCTTCTTCCGCGGTGAAGAGTGGGTTTTACACCTGTTTG
TCCTCCTAGGGTTTTTAGGAATTCGGTGGTGTTTCGGGGCGAACCAGGCGAAACCGGGGCGATTCGGGGCATCAGGGACCGAAAAGAGGTCACCGGGCTCGGCCCGCGCA
AACGGGCCGAATGGTTGGCCTCGGCCTCTTGCCAAGGCCGACCATATGCTCGGAAATGGCCCGACCCTTTGGTCCGATCTTCCTCTGGGTCGGTCTTTGGGTCCTACCTC
TGCCCGATTGTCCTCGTCAGCTCCTTGTCCATCTGTGTGGTCCAAAATCACCTATAACACCTTGAACACTTCACCTATTCATTTTACGATGATCCATGAGCTAGAAAAAC
GACATGCAGACCTTCTTCTGGATGAGGAAAAGTATTGGAAGCAACGGTCAAGAGAGAACTGGCTAAAGTGGGGTGACAGAAATACTCGATGGTTCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACGAGGAGCTGACGAGGACAACCGGGGAGAAATCGGGCTGGGATACGGACCAAAGAGGCGGAGCCGGCAAGTGGGACGGGCCAAGGCCGAAGGGGTCGGGTTTTTG
GCCCGACCCCCTGCTCGGCCTCAGCCCAAGGCCCGTTCGGTCTCGTCTGGTCCCCACCGCCTCTGGCTGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATCC
CTAAAAACCCTAGGAGGATGAGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTCTAGGATTCTGAATTCGGATTCGGCACTT
AAGGGCCCCGACATTCCCCTGCGACCCGGCCACGAAACTGAGAAAGACGTGACCTGCAAGACCAGCAAAAACCGCTGCACACCGGCGTGGTGTAGGCCACACCGCCTCCG
ATGCCTAAGTCAGAAAACCGAGGAGAAGCTACAGATAGTAAAGGGGAGAGTCCAGAATCGAGTTTCGGAACCCTTCTTCCGCGGTGAAGAGTGGGTTTTACACCTGTTTG
TCCTCCTAGGGTTTTTAGGAATTCGGTGGTGTTTCGGGGCGAACCAGGCGAAACCGGGGCGATTCGGGGCATCAGGGACCGAAAAGAGGTCACCGGGCTCGGCCCGCGCA
AACGGGCCGAATGGTTGGCCTCGGCCTCTTGCCAAGGCCGACCATATGCTCGGAAATGGCCCGACCCTTTGGTCCGATCTTCCTCTGGGTCGGTCTTTGGGTCCTACCTC
TGCCCGATTGTCCTCGTCAGCTCCTTGTCCATCTGTGTGGTCCAAAATCACCTATAACACCTTGAACACTTCACCTATTCATTTTACGATGATCCATGAGCTAGAAAAAC
GACATGCAGACCTTCTTCTGGATGAGGAAAAGTATTGGAAGCAACGGTCAAGAGAGAACTGGCTAAAGTGGGGTGACAGAAATACTCGATGGTTCCATTAG
Protein sequenceShow/hide protein sequence
MYEELTRTTGEKSGWDTDQRGGAGKWDGPRPKGSGFWPDPLLGLSPRPVRSRLVPTASGCPGFAWFDLKRLRIPKNPRRMSRPRLPPHLQIYRWWHVKVRSRILNSDSAL
KGPDIPLRPGHETEKDVTCKTSKNRCTPAWCRPHRLRCLSQKTEEKLQIVKGRVQNRVSEPFFRGEEWVLHLFVLLGFLGIRWCFGANQAKPGRFGASGTEKRSPGSARA
NGPNGWPRPLAKADHMLGNGPTLWSDLPLGRSLGPTSARLSSSAPCPSVWSKITYNTLNTSPIHFTMIHELEKRHADLLLDEEKYWKQRSRENWLKWGDRNTRWFH