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Lag0022951 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022951
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr7:41513651..41517326
RNA-Seq ExpressionLag0022951
SyntenyLag0022951
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.5e-0753.12Show/hide
Query:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDTT
        ++WRKK+RA+LVQ KVA+ ++E    P   TE++K +M ++AYSTI+LYLSD V R +DE  TT
Subjt:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDTT
KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]2.5e-0754.69Show/hide
Query:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDTT
        S+WRKK+RA+LVQ KVA+ ++E    P   TE++K +M ++AYSTI+LYLSD V R +DE  TT
Subjt:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDTT
PON33116.1 hypothetical protein PanWU01x14_355310, partial [Parasponia andersonii]3.2e-0750Show/hide
Query:  KEQSMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
        ++ S WRKKM+ LLVQ K+ +A+E+    P   ++ QK E+ + AYS I+LYL+DNV RQI+ EDT
Subjt:  KEQSMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
PON95322.1 hypothetical protein TorRG33x02_088440, partial [Trema orientale]2.2e-0857.14Show/hide
Query:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
        S WRKKM+ALLVQ K+ +A+E+    P   T+ Q++E+ + AYS IILYL+DNV RQID EDT
Subjt:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
TXG48538.1 hypothetical protein EZV62_024413 [Acer yangbiense]1.7e-0854.84Show/hide
Query:  MWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
        MWRKKM+A+LVQQK  +A+EE  + P   +  +K ++L+ AYSTIIL L+DNV RQ+++EDT
Subjt:  MWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
TrEMBL top hitse value%identityAlignment
A0A2P5A9A0 Uncharacterized protein (Fragment)1.6e-0750Show/hide
Query:  KEQSMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
        ++ S WRKKM+ LLVQ K+ +A+E+    P   ++ QK E+ + AYS I+LYL+DNV RQI+ EDT
Subjt:  KEQSMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
A0A2P5FC12 Uncharacterized protein (Fragment)1.1e-0857.14Show/hide
Query:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
        S WRKKM+ALLVQ K+ +A+E+    P   T+ Q++E+ + AYS IILYL+DNV RQID EDT
Subjt:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
A0A5A7UB25 Putative gag-pol polyprotein1.2e-0754.69Show/hide
Query:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDTT
        S+WRKK+RA+LVQ KVA+ ++E    P   TE++K +M ++AYSTI+LYLSD V R +DE  TT
Subjt:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDTT
A0A5C7GV29 Uncharacterized protein8.2e-0954.84Show/hide
Query:  MWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
        MWRKKM+A+LVQQK  +A+EE  + P   +  +K ++L+ AYSTIIL L+DNV RQ+++EDT
Subjt:  MWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDT
A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-0753.12Show/hide
Query:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDTT
        ++WRKK+RA+LVQ KVA+ ++E    P   TE++K +M ++AYSTI+LYLSD V R +DE  TT
Subjt:  SMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILYLSDNVSRQIDEEDTT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAAGCCAACAACAAAATGCAAAAAAAGAGAAAGAAGAAGAAGAAGAAAGATTCACAGAATTCAATAAGGTAAATATTGGAATACATGGCGGCTTCTTCTTCTT
CCTTTTGAAATTAGCTTCAAGAACAGGTCATCTACTGAATGATTCGCCGCCGGTGGTTGATGGCCGAAACAGACTCGCAGACGGCAGTCGATTATGTCATAGCACGATTG
ACTCTGGTACTGTGGAGGCGAATTTCGAAGGGGAAGGGGAAGGGCACACAGTGAGGGGAAGGGAAGGGGAAAGTAAGAGAGAGATGACAGGGAGAGCTGGGACTTTGCTG
AGGTGCATTGAGGAGAATCAGCTAAAGGTGAAGAAGGAGAGTTCTTCGGCCTGCTGCATCTCTGTGTTAATCGTTAAAGGTCTGTTTGTTCATTGTTTGAGTTTTGAATC
TGTCATTATACTCAACAATTGGTATCAGAGTGTTGTTGGGATAGAGAACTCATCACAGATTGTAAAGGAACAAAGCATGTGGAGAAAGAAGATGAGGGCCCTACTGGTAC
AACAAAAGGTCGCTAGAGCCATCGAAGAGAATCCGGAATATCCACCTGAAACAACAGAGGCACAAAAAGTAGAGATGCTAAAAATAGCTTATAGTACAATTATATTGTAC
TTGTCTGATAATGTTTCAAGACAGATTGATGAAGAAGACACGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGAAGCCAACAACAAAATGCAAAAAAAGAGAAAGAAGAAGAAGAAGAAAGATTCACAGAATTCAATAAGGTAAATATTGGAATACATGGCGGCTTCTTCTTCTT
CCTTTTGAAATTAGCTTCAAGAACAGGTCATCTACTGAATGATTCGCCGCCGGTGGTTGATGGCCGAAACAGACTCGCAGACGGCAGTCGATTATGTCATAGCACGATTG
ACTCTGGTACTGTGGAGGCGAATTTCGAAGGGGAAGGGGAAGGGCACACAGTGAGGGGAAGGGAAGGGGAAAGTAAGAGAGAGATGACAGGGAGAGCTGGGACTTTGCTG
AGGTGCATTGAGGAGAATCAGCTAAAGGTGAAGAAGGAGAGTTCTTCGGCCTGCTGCATCTCTGTGTTAATCGTTAAAGGTCTGTTTGTTCATTGTTTGAGTTTTGAATC
TGTCATTATACTCAACAATTGGTATCAGAGTGTTGTTGGGATAGAGAACTCATCACAGATTGTAAAGGAACAAAGCATGTGGAGAAAGAAGATGAGGGCCCTACTGGTAC
AACAAAAGGTCGCTAGAGCCATCGAAGAGAATCCGGAATATCCACCTGAAACAACAGAGGCACAAAAAGTAGAGATGCTAAAAATAGCTTATAGTACAATTATATTGTAC
TTGTCTGATAATGTTTCAAGACAGATTGATGAAGAAGACACGACTTGA
Protein sequenceShow/hide protein sequence
MSRSQQQNAKKEKEEEEERFTEFNKVNIGIHGGFFFFLLKLASRTGHLLNDSPPVVDGRNRLADGSRLCHSTIDSGTVEANFEGEGEGHTVRGREGESKREMTGRAGTLL
RCIEENQLKVKKESSSACCISVLIVKGLFVHCLSFESVIILNNWYQSVVGIENSSQIVKEQSMWRKKMRALLVQQKVARAIEENPEYPPETTEAQKVEMLKIAYSTIILY
LSDNVSRQIDEEDTT