; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022971 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022971
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:41818124..41819280
RNA-Seq ExpressionLag0022971
SyntenyLag0022971
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]2.0e-8243.54Show/hide
Query:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP
        ++ SS+P  SQI  VT +I   ++++    +   F+K+EV   +K ++P+KAPG DG  A F+  YW  VG +     LN+LN+   I   NKT I+LIP
Subjt:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP

Query:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM
        K  +PK M ++RPISLCNV YK I+K LANRLK                                    K  GKEG +AIKLDMSKA+DRVEW +I ++M
Subjt:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM

Query:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK
         +MGF ++W  ++M+C+ S+S+S+LING  +G+  PS+G+RQGDPLSP +FL+CAEGL+ L+N+   ++ + G  IN  CP +THLFFADDS++FC+A+ 
Subjt:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK

Query:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKI
        EE  +++ I   YE  SGQ IN DKS    S N        I +ILG  +      YLG+PS   RSK Q+F+ LK+K+
Subjt:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKI

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]1.8e-8341.25Show/hide
Query:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP
        ++ SS P  ++IS V ++I   ++++    +   F+++E+ET +  ++P+KAPG DG  A F+  YW+ VG D +   L++LN+   +   NKT ITL+P
Subjt:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP

Query:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM
        K+K+P  M ++RPISLCNV YK I+K LANRLK                                    K++GKEG  AIKLDMSKAYDRVEW +I+++M
Subjt:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM

Query:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK
         +MGF++KW +++M C+ S+S+S+L+NG  YG   P++G+RQGDP+SPYIFL+CA+G + LLN       + G  I   CP ITHLFFADDSL+FC+A+ 
Subjt:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK

Query:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL
        +E   +  I + YE  SGQ IN+DKS    S N    +   +  +LG  ++     YLG+PS   +SK ++F+++K+++E+ L
Subjt:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL

XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber]8.8e-8643.86Show/hide
Query:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP
        ++ SS+P  + I+ V N+I R ++D+  +++   F+ +EV   +K L+P+KAPG DG  A+F+H YWD VG       LN+LN+   +   NKT I+LIP
Subjt:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP

Query:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM
        K   P  M E+RPISLCN TYK I+K LANR K                                    K +GKE  ++IKLDMSKA+DRVEWS+I+ +M
Subjt:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM

Query:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK
         ++GF +KW  +IM C+ S+S+SVLING  YG+  PS+GIRQGDPLSP +FL+CAEGL+ L++    +Q + G  I   CP+ITHLFFADDSL+FC+A +
Subjt:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK

Query:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL
        +E   +  I   YE  SGQ IN DKS    S N +     +I +ILG  ++     YLG+PS   +SK Q+F+++KD++ K L
Subjt:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL

XP_023912601.1 uncharacterized protein LOC112024185 [Quercus suber]7.0e-8343.08Show/hide
Query:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP
        ++ SS+P  + I+ V N+I R ++D+  +++   F+ +EV   +K L+P+KAP  DG  A F+H YWD VG       LN+LN+   +   NKT I+LIP
Subjt:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP

Query:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM
        K   P  M E+RPISLCN TYK I+K LANR K                                    K +GKE  ++IKLDMSKA+DRVEWS+I+ +M
Subjt:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM

Query:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK
         ++GF +KW  +IM C+ S+S+SVLING  +G+  PS+GIRQGDPLSP +FL+CA+GL+ L++    +Q + G  I   CP+ITHLFFADDSL+FC+A +
Subjt:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK

Query:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL
        +E   +  I   YE  S Q IN DKS    S N +     +I +ILG  ++     YLG+PS   +SK QMF+++KD++ K L
Subjt:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL

XP_030964220.1 uncharacterized protein LOC115985421 [Quercus lobata]2.2e-8141.93Show/hide
Query:  ELFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLI
        +++ +S+P  + I+ V ++I R ++++   ++   F+ +EV   ++ L+P+KAPG DG  A F+H YWD VG + I   L++LN+   +   NKT I+LI
Subjt:  ELFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLI

Query:  PKVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREM
        PK   P  M E+ PISLCN TYK I+K LANRLK                                    K +GKE  ++IKLDMSKA+DRVEW++I+ +
Subjt:  PKVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREM

Query:  MLRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRAS
        M+++GF DKW  ++M C+ S+S+SVLING   G+  PS+GIRQGDPLSP +FL+CAEG + L++    +Q + G  I   CP+ITH FFADDSL+FC+A 
Subjt:  MLRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRAS

Query:  KEESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL
         +E   +  I   YE  SGQ IN DKS    S N       +I DILG  ++     YLG+PS   +SK Q+F+++KD++ K L
Subjt:  KEESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL

TrEMBL top hitse value%identityAlignment
A0A2N9G5I8 Reverse transcriptase domain-containing protein2.3e-8443.08Show/hide
Query:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP
        LF++SNP     ++V   I  V++ +   ++  PF +QEV+  IK + P KAPG DG    FY T+WD+VG D     L+ LN+ + ++  N T ITLIP
Subjt:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP

Query:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM
        K ++P  + ++RPISLCNV YK ++K L NRLK                                    +  GK+G +A+KLDMSKAYDRVEW +++ +M
Subjt:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM

Query:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK
        L+MGFN KW  ++M C+ S+S+S+LINGSP G  +P++G+RQGDPLSPY+FL+CAEGL GLL++   +Q ++G  ++   P +THLFFADDSL+FCRA +
Subjt:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK

Query:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL
        EE   +  I   YEA SGQ IN DK+    SK+    +   I  ILG+        YLG+PS   RS+R+ F+++K+KI + L
Subjt:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL

A0A2N9GDB5 Reverse transcriptase domain-containing protein2.7e-8041.69Show/hide
Query:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP
        LF++  P+  Q+ +V   I+RV++ +   Q+   F+  EVE  +K + P KAPG DG    FY  YW  +G+D     L  LN+   ++  N T ITLIP
Subjt:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP

Query:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM
        KV++P+ + E+RPISLCNV YK I+K LANRLK                                    ++ GK G +A+KLDMSKAYDRVEW +++ +M
Subjt:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM

Query:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK
         +MGF++KW  I+M C+ ++S+S+L+NG P+G  +PS+G+RQGDPLSPY+FL+CAEGL  L+ +E  + TLKG  I+   P ITHLFFADDSL+FC+A+ 
Subjt:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK

Query:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKI
         +   I+ I   YE  SGQ IN  K+    SK+   +  R+I+D+L +        YLG+PS   R+K   F+++K+++
Subjt:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKI

A0A2N9HWM9 Reverse transcriptase domain-containing protein1.2e-8042.3Show/hide
Query:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP
        ++ SSNP  + I  VT  ++ V+S      + +PF+++EV   +  ++PSKAPG DG  A F+  +W  VG D     L+ LNN   ++  N T I LIP
Subjt:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP

Query:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM
        KVK P+ M ++RPISLCNV YK I+K L NR+K                                    K  GK  Q+A+KLDMSKAYDRVEW Y+++MM
Subjt:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM

Query:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK
        L++GF  +W  +IM C+ S+S+S+L+NG P G  +PS+G+RQGDPLSPY+FLICAEGLT LL +      ++G  I    P ++HLFFADDSLIFCRA+ 
Subjt:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK

Query:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL
         E   ++ I   YE+ SGQ IN  K+    S+N +     +I +  G         YLG+P    RSK+Q FS++KD+I + L
Subjt:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKIEKAL

A0A2N9HYE3 Reverse transcriptase domain-containing protein1.7e-7941.16Show/hide
Query:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP
        LF+++NP+  Q+  V   I+ V++ +  +Q+   F+  EVE  +K + P KAPG D     FY  YW  +G D     L  LN+   ++  N T ITLIP
Subjt:  LFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIP

Query:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM
        KV++P+ + E+RPISLCNV YK I+K LANRLK                                    ++ GK G +A+KLDMSKAYDRVEW Y++ +M
Subjt:  KVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREMM

Query:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK
         +MGF++KW  ++M C+ ++S+S+L+NG P+G  +PS+G+RQGDPLSPY+FL+CAEGL  L+ +E  S  LKG  I+   P ITHLFFADDSL+FC+A+ 
Subjt:  LRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASK

Query:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKI
        ++ + I+GI   YE  SGQ +N  K+    SK+        I+++LG+        YLG+PS   R+K   F+++K+++
Subjt:  EESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKI

A0A7N2L6Z9 Reverse transcriptase domain-containing protein7.3e-8643.42Show/hide
Query:  ELFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLI
        +++ +SNP  S +  VT +I  +I+++   ++   F+++E+ T +K ++P+K+PG DG  A F+  YWD VG +     LN+LN    ++  NKT I LI
Subjt:  ELFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLI

Query:  PKVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREM
        PK  +PK M ++RPISLCNV YK I+KTLANRLK                                    K+DGK+  +A KLDMSKA+DRVEW +I  +
Subjt:  PKVKDPKFMHEYRPISLCNVTYKAIAKTLANRLK------------------------------------KEDGKEGQVAIKLDMSKAYDRVEWSYIREM

Query:  MLRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRAS
        M +MGFN+ W  +IMRC+ S+S+SV+ING  +G+  P++G+RQGDPLSPY+FL+CAEGL+ LL+    +Q L G  +   CP ITHLFFADDSL+FC+A+
Subjt:  MLRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRAS

Query:  KEESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKI
        +EE   +K I + YEA SGQ +N DKS    S N       TI +ILG  ++     YLG+PS   RSK+ +F+++K+++
Subjt:  KEESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQSSRSKRQMFSKLKDKI

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein4.6e-2123.84Show/hide
Query:  ISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADI-EPFNKTLITLIPKV-KDPKFMHEYRPISLCNVT
        ++ ++   ++ P +  E+   I SL   K+PG DG  A FY  Y + +    +L+    +  E  +   F +  I LIPK  +D      +RPISL N+ 
Subjt:  ISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADI-EPFNKTLITLIPKV-KDPKFMHEYRPISLCNVT

Query:  YKAIAKTLANRLKKEDGK----------------------------------EGQVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLESLSF
         K + K LANR+++   K                                  +  V I +D  KA+D+++  ++ + + ++G +  + +II    +  + 
Subjt:  YKAIAKTLANRLKKEDGK----------------------------------EGQVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLESLSF

Query:  SVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASKEESMVIKGIFKAYEATSGQMIN
        ++++NG     F    G RQG PLSP +F I  E L   + +E E   +KG ++      +    FADD +++       +  +  +   +   SG  IN
Subjt:  SVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASKEESMVIKGIFKAYEATSGQMIN

Query:  LDKSRFMVSKNVNARESRTIEDI
        + KS+  +  N    ES+ + ++
Subjt:  LDKSRFMVSKNVNARESRTIEDI

P08548 LINE-1 reverse transcriptase homolog8.1e-2627.11Show/hide
Query:  ISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNN--EADIEP--FNKTLITLIPKV-KDPKFMHEYRPISLC
        +S ++   ++ P S  E+ +TI++L   K+PG DG  + FY T+     E+ +   LN+  N  +  I P  F +  ITLIPK  KDP     YRPISL 
Subjt:  ISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNN--EADIEP--FNKTLITLIPKV-KDPKFMHEYRPISLC

Query:  NVTYKAIAKTLANRLKKE-------------DGKEG---------------------QVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLES
        N+  K + K L NR+++               G +G                      + + +D  KA+D ++  ++   + ++G    + ++I      
Subjt:  NVTYKAIAKTLANRLKKE-------------DGKEG---------------------QVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLES

Query:  LSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASKEESMVIKGIFKAYEATSGQ
         + ++++NG     F    G RQG PLSP +F I  E L   +    E + +KG  I +    I    FADD +++   +++ +  +  + K Y   SG 
Subjt:  LSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASKEESMVIKGIFKAYEATSGQ

Query:  MINLDKSRFMVSKNVNARESRTIEDILGI----RKEDNLGTYL
         IN  KS   +  N N  E +T++D +      +K   LG YL
Subjt:  MINLDKSRFMVSKNVNARESRTIEDILGI----RKEDNLGTYL

P11369 LINE-1 retrotransposable element ORF2 protein3.4e-2427.1Show/hide
Query:  ISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIE-----PFNKTLITLIPK-VKDPKFMHEYRPISL
        ++  Q   ++ P S +E+E  I SL   K+PG DG  A FY T+     ++ ++  L+ L ++ ++E      F +  ITLIPK  KDP  +  +RPISL
Subjt:  ISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIE-----PFNKTLITLIPK-VKDPKFMHEYRPISL

Query:  CNVTYKAIAKTLANRLKKE-------------DGKEG---------------------QVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLE
         N+  K + K LANR+++               G +G                      + I LD  KA+D+++  ++ +++ R G    +  +I     
Subjt:  CNVTYKAIAKTLANRLKKE-------------DGKEG---------------------QVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLE

Query:  SLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASKEESMVIKGIFKAYEATSG
            ++ +NG          G RQG PLSPY+F I  E L   + ++ E   +KG +I      I+ L  ADD +++    K  +  +  +  ++    G
Subjt:  SLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASKEESMVIKGIFKAYEATSG

Query:  QMINLDKS-RFMVSKNVNARE
          IN +KS  F+ +KN  A +
Subjt:  QMINLDKS-RFMVSKNVNARE

P14381 Transposon TX1 uncharacterized 149 kDa protein4.9e-1522.58Show/hide
Query:  VISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIPKVKDPKFMHEYRPISLCNVTY
        V+S++++ +++ P +  E+   ++ +  +K+PG DG    F+  +WD +G D                   + +++L+PK  D + +  +RP+SL +  Y
Subjt:  VISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIPKVKDPKFMHEYRPISLCNVTY

Query:  KAIAKTLANRLKK-------------EDGKE--------------------GQVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLESLSFSV
        K +AK ++ RLK                G+                         + LD  KA+DRV+  Y+   +    F  ++   +     S    V
Subjt:  KAIAKTLANRLKK-------------EDGKE--------------------GQVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLESLSFSV

Query:  LINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLK
         IN S        +G+RQG PLS  ++ +  E    LL + +    LK
Subjt:  LINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLK

P92555 Uncharacterized mitochondrial protein AtMg012507.6e-1654.41Show/hide
Query:  LINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDS
        +ING+P G   PS+G+RQGDPLSPY+F++C E L+GL  R  E   L G R++N  P I HL FADD+
Subjt:  LINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDS

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein3.5e-0834.83Show/hide
Query:  SKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIPKVKDPKFMHEYRPISLCNVTYKAI
        S +E+   + ++  +KAPG D   A F+   W  V + TI            ++ FN T ITLIPKV     +  +RP+S C V YK I
Subjt:  SKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIPKVKDPKFMHEYRPISLCNVTYKAI

AT4G20520.1 RNA binding;RNA-directed DNA polymerases4.8e-0535.42Show/hide
Query:  LKKEDGKEGQVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMR
        ++++ G +G + +KLD+ KAYDR+ W Y+ + ++  GF + W   I R
Subjt:  LKKEDGKEGQVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMR

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)5.4e-1754.41Show/hide
Query:  LINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDS
        +ING+P G   PS+G+RQGDPLSPY+F++C E L+GL  R  E   L G R++N  P I HL FADD+
Subjt:  LINGSPYGDFRPSQGIRQGDPLSPYIFLICAEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTATTTGAATCATCCAACCCTGAGACTAGTCAAATTTCGAATGTCACCAACAGTATTAAGAGAGTTATATCTGATCAGCAAAGGGCGCAAATGGACATTCCTTT
CAGCAAGCAGGAAGTGGAAACAACGATTAAAAGTCTCAATCCTAGCAAGGCGCCTGGGAGGGATGGAACTCATGCTTCATTCTACCACACCTACTGGGATCATGTGGGTG
AAGATACCATACTGGAGTGCTTGAATATCTTGAACAATGAGGCAGACATAGAACCCTTCAATAAGACGCTGATAACTTTAATCCCCAAAGTGAAAGATCCCAAGTTTATG
CATGAATATCGCCCGATTAGCCTCTGTAATGTGACTTATAAAGCCATAGCGAAAACACTAGCTAATCGGCTTAAGAAGGAAGACGGGAAGGAAGGTCAAGTTGCCATTAA
ACTTGACATGAGCAAAGCTTACGATAGAGTGGAATGGAGCTATATTCGAGAAATGATGTTGAGGATGGGCTTCAATGACAAGTGGACAAGGATTATCATGAGATGTTTGG
AGTCACTTTCGTTCTCAGTGCTTATCAACGGATCACCCTATGGAGACTTTAGACCAAGTCAAGGAATTCGACAAGGAGACCCCCTATCTCCGTATATCTTTCTGATATGC
GCAGAAGGCCTTACGGGTCTTCTCAATAGGGAAGTGGAATCTCAAACATTAAAAGGGTTTCGTATAAATAATTTTTGTCCGATTATCACTCACCTTTTCTTTGCTGATGA
TAGTTTAATCTTTTGCAGGGCATCAAAGGAAGAAAGCATGGTCATTAAAGGCATTTTCAAAGCATATGAGGCAACGTCAGGTCAAATGATTAATCTAGATAAGTCTAGAT
TCATGGTGAGCAAGAACGTGAATGCAAGGGAGAGCAGAACTATTGAAGATATTCTTGGAATTAGAAAGGAGGATAATTTGGGAACCTACTTAGGAATGCCCTCGCAATCC
AGCAGGAGCAAGCGACAAATGTTTAGCAAATTAAAAGACAAGATTGAAAAGGCTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTATTTGAATCATCCAACCCTGAGACTAGTCAAATTTCGAATGTCACCAACAGTATTAAGAGAGTTATATCTGATCAGCAAAGGGCGCAAATGGACATTCCTTT
CAGCAAGCAGGAAGTGGAAACAACGATTAAAAGTCTCAATCCTAGCAAGGCGCCTGGGAGGGATGGAACTCATGCTTCATTCTACCACACCTACTGGGATCATGTGGGTG
AAGATACCATACTGGAGTGCTTGAATATCTTGAACAATGAGGCAGACATAGAACCCTTCAATAAGACGCTGATAACTTTAATCCCCAAAGTGAAAGATCCCAAGTTTATG
CATGAATATCGCCCGATTAGCCTCTGTAATGTGACTTATAAAGCCATAGCGAAAACACTAGCTAATCGGCTTAAGAAGGAAGACGGGAAGGAAGGTCAAGTTGCCATTAA
ACTTGACATGAGCAAAGCTTACGATAGAGTGGAATGGAGCTATATTCGAGAAATGATGTTGAGGATGGGCTTCAATGACAAGTGGACAAGGATTATCATGAGATGTTTGG
AGTCACTTTCGTTCTCAGTGCTTATCAACGGATCACCCTATGGAGACTTTAGACCAAGTCAAGGAATTCGACAAGGAGACCCCCTATCTCCGTATATCTTTCTGATATGC
GCAGAAGGCCTTACGGGTCTTCTCAATAGGGAAGTGGAATCTCAAACATTAAAAGGGTTTCGTATAAATAATTTTTGTCCGATTATCACTCACCTTTTCTTTGCTGATGA
TAGTTTAATCTTTTGCAGGGCATCAAAGGAAGAAAGCATGGTCATTAAAGGCATTTTCAAAGCATATGAGGCAACGTCAGGTCAAATGATTAATCTAGATAAGTCTAGAT
TCATGGTGAGCAAGAACGTGAATGCAAGGGAGAGCAGAACTATTGAAGATATTCTTGGAATTAGAAAGGAGGATAATTTGGGAACCTACTTAGGAATGCCCTCGCAATCC
AGCAGGAGCAAGCGACAAATGTTTAGCAAATTAAAAGACAAGATTGAAAAGGCTCTGTAG
Protein sequenceShow/hide protein sequence
MELFESSNPETSQISNVTNSIKRVISDQQRAQMDIPFSKQEVETTIKSLNPSKAPGRDGTHASFYHTYWDHVGEDTILECLNILNNEADIEPFNKTLITLIPKVKDPKFM
HEYRPISLCNVTYKAIAKTLANRLKKEDGKEGQVAIKLDMSKAYDRVEWSYIREMMLRMGFNDKWTRIIMRCLESLSFSVLINGSPYGDFRPSQGIRQGDPLSPYIFLIC
AEGLTGLLNREVESQTLKGFRINNFCPIITHLFFADDSLIFCRASKEESMVIKGIFKAYEATSGQMINLDKSRFMVSKNVNARESRTIEDILGIRKEDNLGTYLGMPSQS
SRSKRQMFSKLKDKIEKAL