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Lag0022980 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022980
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:41985011..41985445
RNA-Seq ExpressionLag0022980
SyntenyLag0022980
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]5.9e-2045.28Show/hide
Query:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY
        R+L+ GPW FD+ L+ +  P+ + KP  M+FR V+ W+HF +LS+   N +M  RLGN IG F+  +S      W   LRVRV  D  KPL +GIK+NL 
Subjt:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY

Query:  GPFESC
        GP   C
Subjt:  GPFESC

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]8.2e-2248.11Show/hide
Query:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY
        RV+K GPW FDK L+ L +P      + +EF  VAFW+H  +L M   N +M  RLGN IG F   D   +G  W  SLR+RV++D TKPLR+GIK+N+ 
Subjt:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY

Query:  GPFESC
        GP   C
Subjt:  GPFESC

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]8.8e-1639.22Show/hide
Query:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY
        ++ K GPW FD+ L+ + +P+ ++ P+ ++F  +  W+ F +L +      M  RLGN +G F++ D       W  +LRVRV+LD +KPLR+GIK+NL 
Subjt:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY

Query:  GP
        GP
Subjt:  GP

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]3.7e-1443.43Show/hide
Query:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNL
        RVL  GPW FDK LL L    P V+P+ ++   V FW+H C L + L N  + E +GN +G+F   D    G  W  ++R+RV LD  KPLR+G+K+ L
Subjt:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNL

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]8.2e-1441.41Show/hide
Query:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNL
        RVL  GPW FDK LL L    P V+P+ ++   V FW+H C L + L N  + + +GN +G+F   D    G  W  ++R+RV +D  KPLR+G+K+ L
Subjt:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNL

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein2.9e-1238.32Show/hide
Query:  YTQRKTQVRVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLR
        Y  RK   R+L+ GPWLFDK LL L       K T ++FRYV FW+    L +   N  +   LG ++G+ K+ D+G  G    + +R+RV++D   PL+
Subjt:  YTQRKTQVRVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLR

Query:  KGIKVNL
        +G++V L
Subjt:  KGIKVNL

A0A5C7HNL0 CCHC-type domain-containing protein2.6e-1336.15Show/hide
Query:  TSRWDLSWKNWELISFYSLYTQRKTQVRVLKQGPWLFDKFLLALARPIPMVKP--TTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRR
        T  +++ W    + +F+  +T +  + RV+ +GPW FD FLLAL  P  +       M+F  V FW+   +  +   N   V  LG  IG  K  D G  
Subjt:  TSRWDLSWKNWELISFYSLYTQRKTQVRVLKQGPWLFDKFLLALARPIPMVKP--TTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRR

Query:  GHGWRESLRVRVILDNTKPLRKGIKVNLYG
        GH W E L+VRV +D  KPLR+ ++V+L G
Subjt:  GHGWRESLRVRVILDNTKPLRKGIKVNLYG

A0A6J1BSZ1 uncharacterized protein LOC1110054812.9e-2045.28Show/hide
Query:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY
        R+L+ GPW FD+ L+ +  P+ + KP  M+FR V+ W+HF +LS+   N +M  RLGN IG F+  +S      W   LRVRV  D  KPL +GIK+NL 
Subjt:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY

Query:  GPFESC
        GP   C
Subjt:  GPFESC

A0A6J1DU55 uncharacterized protein LOC1110231354.0e-2248.11Show/hide
Query:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY
        RV+K GPW FDK L+ L +P      + +EF  VAFW+H  +L M   N +M  RLGN IG F   D   +G  W  SLR+RV++D TKPLR+GIK+N+ 
Subjt:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY

Query:  GPFESC
        GP   C
Subjt:  GPFESC

A0A6J1DX30 uncharacterized protein LOC1110248744.3e-1639.22Show/hide
Query:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY
        ++ K GPW FD+ L+ + +P+ ++ P+ ++F  +  W+ F +L +      M  RLGN +G F++ D       W  +LRVRV+LD +KPLR+GIK+NL 
Subjt:  RVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNTKPLRKGIKVNLY

Query:  GP
        GP
Subjt:  GP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein5.2e-0625.96Show/hide
Query:  FYSLYTQRKTQVRVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNT
        F+ ++T  ++   VL++GPW F+ +++ L R  P +      F ++ FW+    +     N  +VE +G  +G+    D         +  RV +  D T
Subjt:  FYSLYTQRKTQVRVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRGHGWRESLRVRVILDNT

Query:  KPLR
         PLR
Subjt:  KPLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATGTGCAAAACCTTTAAATAAGCATGGAACATCCCGGTGGGACTTATCGTGGAAAAATTGGGAGCTAATCTCTTTTTATTCACTTTACACTCAGAGGAAGACACA
AGTTCGGGTCCTTAAGCAAGGACCTTGGTTGTTCGACAAGTTCCTCTTAGCGTTGGCTCGACCCATCCCTATGGTTAAGCCAACGACCATGGAATTTCGATATGTGGCAT
TTTGGTTACATTTCTGTGAATTATCGATGGATTTGTATAACTTATCCATGGTGGAGAGACTGGGCAACGTTATTGGCAGGTTCAAGAAATATGATAGTGGGAGGCGTGGC
CATGGTTGGCGTGAAAGTCTTCGTGTTCGAGTTATTCTTGATAACACCAAACCACTCAGAAAAGGAATTAAAGTCAATCTTTACGGACCATTTGAAAGTTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTATGTGCAAAACCTTTAAATAAGCATGGAACATCCCGGTGGGACTTATCGTGGAAAAATTGGGAGCTAATCTCTTTTTATTCACTTTACACTCAGAGGAAGACACA
AGTTCGGGTCCTTAAGCAAGGACCTTGGTTGTTCGACAAGTTCCTCTTAGCGTTGGCTCGACCCATCCCTATGGTTAAGCCAACGACCATGGAATTTCGATATGTGGCAT
TTTGGTTACATTTCTGTGAATTATCGATGGATTTGTATAACTTATCCATGGTGGAGAGACTGGGCAACGTTATTGGCAGGTTCAAGAAATATGATAGTGGGAGGCGTGGC
CATGGTTGGCGTGAAAGTCTTCGTGTTCGAGTTATTCTTGATAACACCAAACCACTCAGAAAAGGAATTAAAGTCAATCTTTACGGACCATTTGAAAGTTGCTAG
Protein sequenceShow/hide protein sequence
MLCAKPLNKHGTSRWDLSWKNWELISFYSLYTQRKTQVRVLKQGPWLFDKFLLALARPIPMVKPTTMEFRYVAFWLHFCELSMDLYNLSMVERLGNVIGRFKKYDSGRRG
HGWRESLRVRVILDNTKPLRKGIKVNLYGPFESC