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Lag0023012 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023012
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr7:42821023..42822735
RNA-Seq ExpressionLag0023012
SyntenyLag0023012
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-2383.1Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPGLDHWTAVK +LKY++RT DYMLVYG  KDLILT YT+SDFQTDKDSRKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
KAA0040406.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-2384.51Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPGLDHWT VK ILKY++RT DYMLVYG TKDLILTVYT+S+FQTDKDSRKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
KAA0040928.1 gag/pol protein [Cucumis melo var. makuwa]8.5e-2484.51Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPG DHWTAVKNILKY+KRT DYMLVYG +KDLILT YT+SDFQTDKD+RKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]2.5e-2384.51Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPGLDHWTAVK ILKY++RT DYMLVYG  KDLILT YT+SDFQTDKDSRKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
TYK14711.1 gag/pol protein [Cucumis melo var. makuwa]8.5e-2484.51Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPG DHWTAVKNILKYI+RT DYMLVYG +KDLILT YTNSDFQ+DKD+RKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
TrEMBL top hitse value%identityAlignment
A0A5A7TE91 Gag/pol protein5.4e-2484.51Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPGLDHWT VK ILKY++RT DYMLVYG TKDLILTVYT+S+FQTDKDSRKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
A0A5A7TKM4 Gag/pol protein1.2e-2384.51Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPGLDHWTAVK ILKY++RT DYMLVYG  KDLILT YT+SDFQTDKDSRKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
A0A5A7TZD0 Gag/pol protein1.6e-2383.1Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPGLDHWTAVK +LKY++RT DYMLVYG  KDLILT YT+SDFQTDKDSRKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
A0A5D3CK74 Gag/pol protein4.1e-2484.51Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPG DHWTAVKNILKY+KRT DYMLVYG +KDLILT YT+SDFQTDKD+RKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
A0A5D3CSB7 Gag/pol protein4.1e-2484.51Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VGIV RYQ NPG DHWTAVKNILKYI+RT DYMLVYG +KDLILT YTNSDFQ+DKD+RKS SGSVFTLNG
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1611.3e-0634.25Show/hide
Query:  SGVGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        + VG++ ++  +P   HW A+K +L+Y++ T  Y L +       L  Y+++D+  D +SR+S SG +F LNG
Subjt:  SGVGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-0946.48Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
        VG+V R+  NPG +HW AVK IL+Y++ T    L +G + D IL  YT++D   D D+RKS +G +FT +G
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSGSVFTLNG
Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.7e-0435.94Show/hide
Query:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSG
        V  + ++   P L H  AV  IL YIK T    L Y +  ++ L V++++ FQ+ KD+R+S +G
Subjt:  VGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLILTVYTNSDFQTDKDSRKSMSG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCTGTTTTGCTTGTGGGTCGACGAGAGAGAGAGAGAGAGCAAGGGAGACAGCGCCGATGGATGCGACAAAGAGGGACTGAGAGAGACTCGTCGAAGAAGATGAA
GAACTCGGGGAAGAGAGGGATTGAGAGCGCAGGCTTTGTGGGTCTGCTTTGCGCACGAGAGAAGAAAATCACCAACGAGAGGAGGAGCGGCGTGGGAATAGTCGGTAGGT
ACCAGTTTAATCCAGGGTTAGACCACTGGACTGCGGTTAAAAACATCCTCAAATATATTAAGAGAACAAATGACTACATGCTAGTCTATGGGACGACTAAGGATTTGATC
CTTACAGTATACACCAACTCTGACTTCCAAACTGACAAAGATTCAAGGAAATCTATGTCAGGTTCAGTATTCACCCTCAACGGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCTGTTTTGCTTGTGGGTCGACGAGAGAGAGAGAGAGAGCAAGGGAGACAGCGCCGATGGATGCGACAAAGAGGGACTGAGAGAGACTCGTCGAAGAAGATGAA
GAACTCGGGGAAGAGAGGGATTGAGAGCGCAGGCTTTGTGGGTCTGCTTTGCGCACGAGAGAAGAAAATCACCAACGAGAGGAGGAGCGGCGTGGGAATAGTCGGTAGGT
ACCAGTTTAATCCAGGGTTAGACCACTGGACTGCGGTTAAAAACATCCTCAAATATATTAAGAGAACAAATGACTACATGCTAGTCTATGGGACGACTAAGGATTTGATC
CTTACAGTATACACCAACTCTGACTTCCAAACTGACAAAGATTCAAGGAAATCTATGTCAGGTTCAGTATTCACCCTCAACGGAAATTGA
Protein sequenceShow/hide protein sequence
MWSVLLVGRREREREQGRQRRWMRQRGTERDSSKKMKNSGKRGIESAGFVGLLCAREKKITNERRSGVGIVGRYQFNPGLDHWTAVKNILKYIKRTNDYMLVYGTTKDLI
LTVYTNSDFQTDKDSRKSMSGSVFTLNGN