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Lag0023039 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023039
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:43235494..43238539
RNA-Seq ExpressionLag0023039
SyntenyLag0023039
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4357906.1 hypothetical protein F8388_005387 [Cannabis sativa]9.1e-0524Show/hide
Query:  GNNFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETN-HSPVGDGASFGEQVAMVSLFTD
        G +  D ++   + L  E FE+     W +W +RN   + +P+MD ++  EW                  G++++TN ++    GA  G    +  +  D
Subjt:  GNNFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETN-HSPVGDGASFGEQVAMVSLFTD

Query:  AAIRPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR
        AA+    +G G+G    D  G+ +AA   +     SV+ +E + I   L+
Subjt:  AAIRPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR

TXG67416.1 hypothetical protein EZV62_008691 [Acer yangbiense]1.5e-0426.98Show/hide
Query:  FSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAM---VSLFTDA
        F D +I     L ++ FE  C+ +W +W+ RN  +H   +M  S   EW   + S++    + +D  GQ++      +  G+S   QV +   V + TDA
Subjt:  FSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAM---VSLFTDA

Query:  AIRPSLKGAGMGAAVLDNCGQTVAAM
        A+    K +  G  + D+ G+ + A+
Subjt:  AIRPSLKGAGMGAAVLDNCGQTVAAM

XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]3.1e-0526.53Show/hide
Query:  NFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAI
        +F D ++ + + L+ +  +   +T W +W +RN L+H       S+   W+  Y+ E K      +    + +  ++   +  SFG      +LF DAA+
Subjt:  NFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAI

Query:  RPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR
          + +  G+GAA++ +  +T A +    E  LSVL AE   +V GL+
Subjt:  RPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.7e-0730.22Show/hide
Query:  LDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAIRPSLKGAG
        L + L+ +    A IT W +WNDRN+L+H   +     +CEW+  +   +   Q+ +     + ++NH PV         V++  L TDAA R +     
Subjt:  LDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAIRPSLKGAG

Query:  MGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR
         G  + D+    VAA        LS L AE++ I+EGL+
Subjt:  MGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR

XP_030502714.1 uncharacterized protein LOC115717884 [Cannabis sativa]4.5e-0426.53Show/hide
Query:  NFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAI
        + +D ++C  + L  +         W LWN RNN +H+  +M  +   +W  +Y+ +Y   Q  I T     +   S V DG S     + + ++TDAAI
Subjt:  NFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAI

Query:  RPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR
            +    G  V+DN G   A +       +  + AE K I   L+
Subjt:  RPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR

TrEMBL top hitse value%identityAlignment
A0A5C7IG33 Uncharacterized protein7.5e-0526.98Show/hide
Query:  FSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAM---VSLFTDA
        F D +I     L ++ FE  C+ +W +W+ RN  +H   +M  S   EW   + S++    + +D  GQ++      +  G+S   QV +   V + TDA
Subjt:  FSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAM---VSLFTDA

Query:  AIRPSLKGAGMGAAVLDNCGQTVAAM
        A+    K +  G  + D+ G+ + A+
Subjt:  AIRPSLKGAGMGAAVLDNCGQTVAAM

A0A6J1DX30 uncharacterized protein LOC1110248744.7e-0730.22Show/hide
Query:  LDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAIRPSLKGAG
        L + L+ +    A IT W +WNDRN+L+H   +     +CEW+  +   +   Q+ +     + ++NH PV         V++  L TDAA R +     
Subjt:  LDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAIRPSLKGAG

Query:  MGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR
         G  + D+    VAA        LS L AE++ I+EGL+
Subjt:  MGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR

A0A7J6EHV4 RNase H domain-containing protein4.4e-0524Show/hide
Query:  GNNFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETN-HSPVGDGASFGEQVAMVSLFTD
        G +  D ++   + L  E FE+     W +W +RN   + +P+MD ++  EW                  G++++TN ++    GA  G    +  +  D
Subjt:  GNNFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETN-HSPVGDGASFGEQVAMVSLFTD

Query:  AAIRPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR
        AA+    +G G+G    D  G+ +AA   +     SV+ +E + I   L+
Subjt:  AAIRPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR

A0A7J6GQ97 CCHC-type domain-containing protein8.3e-0425.19Show/hide
Query:  LQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAIRPSLKGAGMGAA
        L    FE+    FW +W +RN   +N+P+++ ++  EW+    + Y P  +   ++  +       +    +    V  V+   DAA+ P  +G G+G  
Subjt:  LQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAIRPSLKGAGMGAA

Query:  VLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR
          D CG ++AA   F     SVL AE + ++  ++
Subjt:  VLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR

A0A803Q6L7 Uncharacterized protein3.7e-0425.93Show/hide
Query:  LQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAIRPSLKGAGMGAA
        L    FE+A   FW +W +RN   +N+P+++ ++  EW+    + Y P  +   ++          +    +    V  V+   DAA+ P  +G G+G  
Subjt:  LQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTDAAIRPSLKGAGMGAA

Query:  VLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR
          D CG  +AA   F     SVL AE + ++  ++
Subjt:  VLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCCTCGACTGGATGCCCATATTCCGGTTGGTAATAATTTTTCGGATCGTATCATTTGTCTTGATAAGGGCCTTCAGATGGAATCTTTTGAACAGGCCTGTATTAC
TTTTTGGACCTTATGGAATGATAGAAATAATCTTGTTCATAATGTTCCTATTATGGATTGGTCAAAAAGGTGTGAGTGGATATATGACTATTGGTCGGAATACAAGCCAA
AGCAGTCTGTTATTGACACAATGGGGCAGCAGATGGAGACAAATCATTCGCCGGTGGGCGATGGGGCGTCCTTCGGGGAGCAGGTCGCGATGGTTTCTTTGTTTACAGAT
GCTGCGATCCGGCCATCGTTGAAAGGTGCAGGTATGGGAGCTGCTGTCCTTGATAATTGTGGGCAAACTGTAGCAGCAATGGAATTCTTTGAGGAAGCTTCACTCTCGGT
CCTGGCCGCCGAAGTTAAAAAAATCGTTGAAGGCTTGAGAAAAGAGAAAGGGGAAGGTCCCGTTCCCGGCATCGGAATGAGGAGGAAGTTCCTCATCCCTCCCCTGTTGG
CGATACCCACGACCAGATCTGGAACGCCCAAGACCAGATCGTGCGATACCCACACATTGAAGCCCGAAAACCAAATTTGGAAAGACGCGGCGATACCCACTAACCAAAGC
CCACGACCAGATTGGCGATACCCACCCACCGTCGGTGTCGGAAAGACACTGCAAACGATGACGGCGTGGCTCGATCGAGGCTGGCTACTCGAGTTCGTGTTTCAACGGCG
ATGTGCAATGGAGCTGAGAGAGAGAGAAATCTCGAAGAAAGGGGTGACACTTGTCGTTGACGATTTGAGCTGCGACGAAGTGGCGACACAGCGACAACTCGTCGATCGAA
GGTGCGACGGTGTCTGGTTTGGGTTGCAGGTTTTAGCGTTCTGTAGTGTAACCGAGAGAGAGAGAGATAAGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCCTCGACTGGATGCCCATATTCCGGTTGGTAATAATTTTTCGGATCGTATCATTTGTCTTGATAAGGGCCTTCAGATGGAATCTTTTGAACAGGCCTGTATTAC
TTTTTGGACCTTATGGAATGATAGAAATAATCTTGTTCATAATGTTCCTATTATGGATTGGTCAAAAAGGTGTGAGTGGATATATGACTATTGGTCGGAATACAAGCCAA
AGCAGTCTGTTATTGACACAATGGGGCAGCAGATGGAGACAAATCATTCGCCGGTGGGCGATGGGGCGTCCTTCGGGGAGCAGGTCGCGATGGTTTCTTTGTTTACAGAT
GCTGCGATCCGGCCATCGTTGAAAGGTGCAGGTATGGGAGCTGCTGTCCTTGATAATTGTGGGCAAACTGTAGCAGCAATGGAATTCTTTGAGGAAGCTTCACTCTCGGT
CCTGGCCGCCGAAGTTAAAAAAATCGTTGAAGGCTTGAGAAAAGAGAAAGGGGAAGGTCCCGTTCCCGGCATCGGAATGAGGAGGAAGTTCCTCATCCCTCCCCTGTTGG
CGATACCCACGACCAGATCTGGAACGCCCAAGACCAGATCGTGCGATACCCACACATTGAAGCCCGAAAACCAAATTTGGAAAGACGCGGCGATACCCACTAACCAAAGC
CCACGACCAGATTGGCGATACCCACCCACCGTCGGTGTCGGAAAGACACTGCAAACGATGACGGCGTGGCTCGATCGAGGCTGGCTACTCGAGTTCGTGTTTCAACGGCG
ATGTGCAATGGAGCTGAGAGAGAGAGAAATCTCGAAGAAAGGGGTGACACTTGTCGTTGACGATTTGAGCTGCGACGAAGTGGCGACACAGCGACAACTCGTCGATCGAA
GGTGCGACGGTGTCTGGTTTGGGTTGCAGGTTTTAGCGTTCTGTAGTGTAACCGAGAGAGAGAGAGATAAGTGCTAA
Protein sequenceShow/hide protein sequence
MFPRLDAHIPVGNNFSDRIICLDKGLQMESFEQACITFWTLWNDRNNLVHNVPIMDWSKRCEWIYDYWSEYKPKQSVIDTMGQQMETNHSPVGDGASFGEQVAMVSLFTD
AAIRPSLKGAGMGAAVLDNCGQTVAAMEFFEEASLSVLAAEVKKIVEGLRKEKGEGPVPGIGMRRKFLIPPLLAIPTTRSGTPKTRSCDTHTLKPENQIWKDAAIPTNQS
PRPDWRYPPTVGVGKTLQTMTAWLDRGWLLEFVFQRRCAMELREREISKKGVTLVVDDLSCDEVATQRQLVDRRCDGVWFGLQVLAFCSVTERERDKC