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Lag0023054 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023054
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein
Genome locationchr7:43461511..43462115
RNA-Seq ExpressionLag0023054
SyntenyLag0023054
Gene Ontology termsNA
InterPro domainsIPR044809 - F-box protein AUF1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585288.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]9.7e-2666Show/hide
Query:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ
        + F+  +VKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPT + KVER+GGVKWRA+FGI   +CVIL+FRGI +   D  A+   FDFI  ++
Subjt:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ

XP_022951596.1 F-box protein At1g22220-like [Cucurbita moschata]9.7e-2666Show/hide
Query:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ
        + F+  +VKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPT + KVER+GGVKWRA+FGI   +CVIL+FRGI +   D  A+   FDFI  ++
Subjt:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ

XP_023002829.1 F-box protein At1g78100-like [Cucurbita maxima]9.7e-2666Show/hide
Query:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ
        + F+  +VKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPT + KVER+GGVKWRA+FGI   +CVIL+FRGI +   D  A+   FDFI  ++
Subjt:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ

XP_023537288.1 F-box protein At1g22220-like [Cucurbita pepo subsp. pepo]9.7e-2666Show/hide
Query:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ
        + F+  +VKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPT + KVER+GGVKWRA+FGI   +CVIL+FRGI +   D  A+   FDFI  ++
Subjt:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ

XP_038886087.1 F-box protein At1g22220 [Benincasa hispida]1.0e-1961.86Show/hide
Query:  FYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAMTKDFDFIRGMQ
        F+  +VKSFF LIS +LVQSESQNSPAQIL QF +I RL+IEFPT + KVERV  VKW+A+FG    +CVILIFRGI + +  A    DFDFI G++
Subjt:  FYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAMTKDFDFIRGMQ

TrEMBL top hitse value%identityAlignment
A0A0A0LN04 F-box domain-containing protein4.7e-1858.42Show/hide
Query:  FYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFR----GIWNLDDRAAMTKDFDFIRGM
        F+  ++KSF DL+SPIL+QSESQNSPAQIL QF RI  L+IEFPT++ KVERV  VKWRA+FG    +CVILIFR    G    DD   +  D DFI G+
Subjt:  FYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFR----GIWNLDDRAAMTKDFDFIRGM

Query:  Q
        +
Subjt:  Q

A0A1S3BC00 F-box protein At1g222202.3e-1756.86Show/hide
Query:  FYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAMTKD-----FDFIRG
        F+  +VKSF DL+SPILVQSE+QNSPAQIL QF +I  L+IEFPT++ KVERV  VKWRA+FG    +CVILIFR I     + A+ +D      DFI G
Subjt:  FYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAMTKD-----FDFIRG

Query:  MQ
        ++
Subjt:  MQ

A0A5A7VGI7 F-box protein2.3e-1756.86Show/hide
Query:  FYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAMTKD-----FDFIRG
        F+  +VKSF DL+SPILVQSE+QNSPAQIL QF +I  L+IEFPT++ KVERV  VKWRA+FG    +CVILIFR I     + A+ +D      DFI G
Subjt:  FYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAMTKD-----FDFIRG

Query:  MQ
        ++
Subjt:  MQ

A0A6J1GI01 F-box protein At1g22220-like4.7e-2666Show/hide
Query:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ
        + F+  +VKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPT + KVER+GGVKWRA+FGI   +CVIL+FRGI +   D  A+   FDFI  ++
Subjt:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ

A0A6J1KRK0 F-box protein At1g78100-like4.7e-2666Show/hide
Query:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ
        + F+  +VKSFFDLISPILVQSESQNSPAQIL QF RI RLEIEFPT + KVER+GGVKWRA+FGI   +CVIL+FRGI +   D  A+   FDFI  ++
Subjt:  FDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVILIFRGI-WNLDDRAAMTKDFDFIRGMQ

SwissProt top hitse value%identityAlignment
Q9C9S2 F-box protein AUF11.8e-0637.35Show/hide
Query:  FYHFIVKSFFDLISPIL--------VQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFR
        F+  + KS   L+ PI         + + S  +PAQIL  F RI  LE+E    + K+E+   VKW+A+FG    +CVI+ FR
Subjt:  FYHFIVKSFFDLISPIL--------VQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFR

Q9LM18 F-box protein AUF27.3e-0834.12Show/hide
Query:  PILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAM--TKDFDFIRGMQ
        PI + + S + P +IL +F RI  L++E P  + K+E+   VKW+A+FG    +CVI+ FR    +    A+    D +F+ G++
Subjt:  PILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAM--TKDFDFIRGMQ

Arabidopsis top hitse value%identityAlignment
AT1G22220.1 F-box family protein5.2e-0934.12Show/hide
Query:  PILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAM--TKDFDFIRGMQ
        PI + + S + P +IL +F RI  L++E P  + K+E+   VKW+A+FG    +CVI+ FR    +    A+    D +F+ G++
Subjt:  PILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFRGIWNLDDRAAM--TKDFDFIRGMQ

AT1G30200.1 F-box family protein3.8e-0443.14Show/hide
Query:  SQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVIL
        + +SP Q+L  F  I  L+IE PT    +E    +KWRA FG    NC+IL
Subjt:  SQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVIL

AT1G30200.2 F-box family protein3.8e-0443.14Show/hide
Query:  SQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVIL
        + +SP Q+L  F  I  L+IE PT    +E    +KWRA FG    NC+IL
Subjt:  SQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVIL

AT1G78100.1 F-box family protein1.3e-0737.35Show/hide
Query:  FYHFIVKSFFDLISPIL--------VQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFR
        F+  + KS   L+ PI         + + S  +PAQIL  F RI  LE+E    + K+E+   VKW+A+FG    +CVI+ FR
Subjt:  FYHFIVKSFFDLISPIL--------VQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFG---INCVILIFR

AT5G46170.1 F-box family protein8.5e-0441.18Show/hide
Query:  SQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVIL
        + +SP Q+L  F  I  L IE P+    ++    +KWRA+FG    NCVIL
Subjt:  SQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGVKWRAKFGI---NCVIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTTCTATCAGCTTCCATTTCTTCTCTATTTTTCCAGTCATCTCCATCGGTCTTCTTCTCCATCTCTCGTGTTCTTCATTCTTCCGTCTTCTCCATATTTCTCCA
CTTGTTCGCAGAGGCCTGGGGAAAACGCTTCAATTTCAACCTTCATTTTGATTTCTATCATTTCATCGTCAAGTCGTTCTTCGATTTGATTTCCCCTATTCTCGTACAAT
CCGAGTCGCAGAACTCTCCGGCGCAAATCCTCTGCCAGTTCGCCCGGATCCACCGCCTCGAGATCGAGTTTCCGACGAGCAATCCCAAGGTCGAAAGAGTCGGGGGCGTT
AAATGGAGAGCGAAGTTTGGGATTAACTGCGTGATATTGATTTTTCGAGGGATTTGGAATTTGGATGATCGGGCAGCGATGACGAAAGATTTCGATTTCATCAGAGGGAT
GCAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTTCTATCAGCTTCCATTTCTTCTCTATTTTTCCAGTCATCTCCATCGGTCTTCTTCTCCATCTCTCGTGTTCTTCATTCTTCCGTCTTCTCCATATTTCTCCA
CTTGTTCGCAGAGGCCTGGGGAAAACGCTTCAATTTCAACCTTCATTTTGATTTCTATCATTTCATCGTCAAGTCGTTCTTCGATTTGATTTCCCCTATTCTCGTACAAT
CCGAGTCGCAGAACTCTCCGGCGCAAATCCTCTGCCAGTTCGCCCGGATCCACCGCCTCGAGATCGAGTTTCCGACGAGCAATCCCAAGGTCGAAAGAGTCGGGGGCGTT
AAATGGAGAGCGAAGTTTGGGATTAACTGCGTGATATTGATTTTTCGAGGGATTTGGAATTTGGATGATCGGGCAGCGATGACGAAAGATTTCGATTTCATCAGAGGGAT
GCAATTTTGA
Protein sequenceShow/hide protein sequence
MPFLSASISSLFFQSSPSVFFSISRVLHSSVFSIFLHLFAEAWGKRFNFNLHFDFYHFIVKSFFDLISPILVQSESQNSPAQILCQFARIHRLEIEFPTSNPKVERVGGV
KWRAKFGINCVILIFRGIWNLDDRAAMTKDFDFIRGMQF