; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023057 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023057
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:43530998..43532398
RNA-Seq ExpressionLag0023057
SyntenyLag0023057
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5464529.1 hypothetical protein F2P56_014601 [Juglans regia]3.1e-3139.76Show/hide
Query:  VVGKFRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLD
        ++ +F ++++K ++L  GPW FD  L+++        V  +     +FWV++H++PL  +T     LLG ++G VEE+D    D   G  +R+RV L +D
Subjt:  VVGKFRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLD

Query:  KPLRRGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQ--YGEWLRA
        KPL RG K    G+ P W    YE+LP FCY CGCLGH +REC   I+G   ++V    YG WLRA
Subjt:  KPLRRGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQ--YGEWLRA

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.3e-4838.31Show/hide
Query:  MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFD
        MDEI   W+H   T +E + +  +   P+L+A+ ++LCVV K                                       F+++ EK+R+L++GPW F+
Subjt:  MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFD

Query:  KALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQY
        K+L+VL  P A+   +D+ FN  +FW+Q+HN+P    + + A +LG +LG VEEI+G G D W GP IR+RV + + KPLRRG KL +      WCP++Y
Subjt:  KALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQY

Query:  EKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQYGEWLRATPFKTTL
        EKLPDFCY CG +GH  REC ++ +  ++ + +QYG+WLRAT  K ++
Subjt:  EKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQYGEWLRATPFKTTL

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.7e-3736.49Show/hide
Query:  MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFD
        MD+I   W++ +L +EE   I+ +   P+L+ + IQLC VGK                                       F+TM EK R+ + GPW FD
Subjt:  MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFD

Query:  KALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQY
        K+L++LV   A+   +D+  +  +FWVQ+H +     T+D A  LG +LG VEE+DG     W  P + +RV + + KPLRRG K+        WCP++Y
Subjt:  KALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQY

Query:  EKLPDFCYSCGCLGHVKRECPK
        E+LPDFCY CGC+GH  RE  K
Subjt:  EKLPDFCYSCGCLGHVKRECPK

XP_023888198.1 uncharacterized protein LOC112000324 [Quercus suber]2.0e-3040.68Show/hide
Query:  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLR
        F    +  +IL+ GPW FDK LI L  P  SE+V D  F+  SFWVQ+HN+PL+R  R  A ++G  LG VE++D        G  +R+RV L +++PL 
Subjt:  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLR

Query:  RGFKLLDLG-KAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVD--QYGEWLRAT---PFKTTLLRSK
        RG + +D+G   P W   QYE++P FCY CG + H +++C        +L  +  QYG WLRAT   P +T ++ +K
Subjt:  RGFKLLDLG-KAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVD--QYGEWLRAT---PFKTTLLRSK

XP_023926510.1 uncharacterized protein LOC112037926 [Quercus suber]1.5e-3040.68Show/hide
Query:  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLR
        F    +  +IL+ GPW FDK LI L  P  SE+V D  F+  SFWVQ+HN+PL+R  R  A ++G  LG VE++D        G  +R+RV L +++PL 
Subjt:  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLR

Query:  RGFKLLDLG-KAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVD--QYGEWLRAT---PFKTTLLRSK
        RG + +D+G   P W   QYE++P FCY CG + H +++C        +L  +  QYG WLRAT   P +T ++ +K
Subjt:  RGFKLLDLG-KAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVD--QYGEWLRAT---PFKTTLLRSK

TrEMBL top hitse value%identityAlignment
A0A1R3K847 Uncharacterized protein1.7e-3033.46Show/hide
Query:  IAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFDKAL
        ++A W++ +LT+EE   +  N      S  E +LC++GK                                       F +  EK R+   GPW F+KAL
Subjt:  IAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFDKAL

Query:  IVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQYEKL
        +VL    A  +V ++     +FW+QVH++PL   T      +G+  G V EID  G     G  +R+R CL ++KPLRRG  L            +YEKL
Subjt:  IVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQYEKL

Query:  PDFCYSCGCLGHVKRECPKQI--QGSSSLTVDQYGEWLRA-TPFKTTLLRSKFGGAG
        PDFCY CGCL H + EC K +  +  S     +YG WLRA  P   TL   KF G G
Subjt:  PDFCYSCGCLGHVKRECPKQI--QGSSSLTVDQYGEWLRA-TPFKTTLLRSKFGGAG

A0A5C7H3R2 CCHC-type domain-containing protein2.2e-3034.8Show/hide
Query:  EIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGKFRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDF
        ++A  +Q+LS+ EE+      +E   L   E++  C+VGK  T  ++ R+   GPW F  +LI L  P  + ++  L FN+T+FW+Q+H +P+    R  
Subjt:  EIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGKFRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDF

Query:  ALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAP--GWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSL--TVDQYGE
        A  + EQ+G   E+     +CW G  +R++V + + KPL+R  + L LGK        ++YE+LP+FC++CG +GH  +EC  +    ++L  TV +YG 
Subjt:  ALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAP--GWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSL--TVDQYGE

Query:  WLRA
        WL+A
Subjt:  WLRA

A0A6J1D765 uncharacterized protein LOC1110179026.1e-4938.31Show/hide
Query:  MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFD
        MDEI   W+H   T +E + +  +   P+L+A+ ++LCVV K                                       F+++ EK+R+L++GPW F+
Subjt:  MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFD

Query:  KALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQY
        K+L+VL  P A+   +D+ FN  +FW+Q+HN+P    + + A +LG +LG VEEI+G G D W GP IR+RV + + KPLRRG KL +      WCP++Y
Subjt:  KALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQY

Query:  EKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQYGEWLRATPFKTTL
        EKLPDFCY CG +GH  REC ++ +  ++ + +QYG+WLRAT  K ++
Subjt:  EKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQYGEWLRATPFKTTL

A0A6J1DU55 uncharacterized protein LOC1110231356.3e-3037.99Show/hide
Query:  RILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEID----GFGIDCWTGPIIRLRVCLRLDKPLRRGFK
        R++  GPW FDKALIVL  PC+S+N+ +L FN  +FW+ + ++P++   +  A+ LG  +G   ++D    GF    W G  +R+RV + + KPLRRG K
Subjt:  RILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEID----GFGIDCWTGPIIRLRVCLRLDKPLRRGFK

Query:  LLDLGKAPG-WCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGS--SSLTVDQYGEWLRATPFKTTLLRSKFGGAGSKAD
        +   G   G W P+QYE+LPDFCY CG +GH   +C  +   +   S    +YG WLR    K    + + G + ++ D
Subjt:  LLDLGKAPG-WCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGS--SSLTVDQYGEWLRATPFKTTLLRSKFGGAGSKAD

A0A6J1DVS4 uncharacterized protein LOC1110235558.2e-3836.49Show/hide
Query:  MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFD
        MD+I   W++ +L +EE   I+ +   P+L+ + IQLC VGK                                       F+TM EK R+ + GPW FD
Subjt:  MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK---------------------------------------FRTMEEKARILANGPWMFD

Query:  KALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQY
        K+L++LV   A+   +D+  +  +FWVQ+H +     T+D A  LG +LG VEE+DG     W  P + +RV + + KPLRRG K+        WCP++Y
Subjt:  KALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQY

Query:  EKLPDFCYSCGCLGHVKRECPK
        E+LPDFCY CGC+GH  RE  K
Subjt:  EKLPDFCYSCGCLGHVKRECPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding4.6e-0926.43Show/hide
Query:  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLR
        F++ E    IL  GPW F+  +   V+   ++   D  F    FW+Q+  +PL   T      +GE++G+                              
Subjt:  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLR

Query:  RGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECP
          F   +LG+       QYEKL +FC +CG L H   ECP
Subjt:  RGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAATCGCAGCGAAATGGCAGCATTTGTCTTTAACAGAGGAGGAGGCGAAGGGTATAATCACCAATGAACACAGCCCCCTCCTCTCTGCAGAAGAAATCCAACT
TTGTGTGGTTGGAAAGTTCCGCACCATGGAGGAAAAGGCACGCATTTTGGCTAATGGCCCATGGATGTTTGATAAAGCGCTCATTGTTCTTGTGGTGCCTTGTGCTTCTG
AGAATGTAGTGGATTTACCTTTTAATGAAACCTCCTTTTGGGTACAGGTCCACAATGTTCCTCTTGCTCGTCAAACACGTGACTTTGCTCTGTTATTGGGTGAACAATTG
GGCATGGTGGAAGAGATTGATGGGTTTGGGATAGATTGTTGGACAGGACCAATTATCCGATTGCGTGTCTGTTTAAGGTTGGATAAACCACTCAGGCGGGGTTTCAAGCT
TCTTGATTTGGGAAAGGCCCCAGGGTGGTGTCCCGTCCAATACGAAAAATTACCGGATTTTTGTTATTCTTGTGGATGTCTTGGCCATGTTAAGAGAGAATGTCCAAAGC
AAATTCAAGGATCTTCTAGCTTGACAGTGGACCAATATGGTGAATGGCTTCGTGCGACCCCTTTCAAAACAACTCTGCTGCGAAGCAAGTTCGGCGGTGCAGGTTCTAAA
GCAGATGACGGTCATGATGCTCCGACGACAGAGGACGGTGCCGAATGTGCTGGGCTGGTTCGTGGGTCACCTCCGACGGTTTTAGCGACGTCGTCGGGGGATACTTCTCG
GAAAGTTGATAGTACGACGGGCGTTGATCCGGTTCCGACCAAGAACGTGACCGCTTCAATTCCCACGTCTACGAAGATTACGGGCCTCAAGCCATTAGATTCGGAGAATT
TGATGATCGTTGAAACTGCTTGCCAAGAGGGACACGTGGATGGAACTAAGGGATGGAAACGTCGTGCACGTGATGGGCCAAATGAGTCTGATACACATTTTCATACAGAG
GGAATTACCGGAGGCAAACGACTGTATGAGGGCCATCGATCTCCTTCTGACGTGATTCTGAAAAAGACAAAACGAACTCCTGATGTGGTGGCTATTTCGGCACTTCCCCA
TACATCTGCTGATGATTCTTCTGCTCCTTTGGATTTGGCGGCGGCTGGTTCCCAGCCCCGCCAGTCGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAATCGCAGCGAAATGGCAGCATTTGTCTTTAACAGAGGAGGAGGCGAAGGGTATAATCACCAATGAACACAGCCCCCTCCTCTCTGCAGAAGAAATCCAACT
TTGTGTGGTTGGAAAGTTCCGCACCATGGAGGAAAAGGCACGCATTTTGGCTAATGGCCCATGGATGTTTGATAAAGCGCTCATTGTTCTTGTGGTGCCTTGTGCTTCTG
AGAATGTAGTGGATTTACCTTTTAATGAAACCTCCTTTTGGGTACAGGTCCACAATGTTCCTCTTGCTCGTCAAACACGTGACTTTGCTCTGTTATTGGGTGAACAATTG
GGCATGGTGGAAGAGATTGATGGGTTTGGGATAGATTGTTGGACAGGACCAATTATCCGATTGCGTGTCTGTTTAAGGTTGGATAAACCACTCAGGCGGGGTTTCAAGCT
TCTTGATTTGGGAAAGGCCCCAGGGTGGTGTCCCGTCCAATACGAAAAATTACCGGATTTTTGTTATTCTTGTGGATGTCTTGGCCATGTTAAGAGAGAATGTCCAAAGC
AAATTCAAGGATCTTCTAGCTTGACAGTGGACCAATATGGTGAATGGCTTCGTGCGACCCCTTTCAAAACAACTCTGCTGCGAAGCAAGTTCGGCGGTGCAGGTTCTAAA
GCAGATGACGGTCATGATGCTCCGACGACAGAGGACGGTGCCGAATGTGCTGGGCTGGTTCGTGGGTCACCTCCGACGGTTTTAGCGACGTCGTCGGGGGATACTTCTCG
GAAAGTTGATAGTACGACGGGCGTTGATCCGGTTCCGACCAAGAACGTGACCGCTTCAATTCCCACGTCTACGAAGATTACGGGCCTCAAGCCATTAGATTCGGAGAATT
TGATGATCGTTGAAACTGCTTGCCAAGAGGGACACGTGGATGGAACTAAGGGATGGAAACGTCGTGCACGTGATGGGCCAAATGAGTCTGATACACATTTTCATACAGAG
GGAATTACCGGAGGCAAACGACTGTATGAGGGCCATCGATCTCCTTCTGACGTGATTCTGAAAAAGACAAAACGAACTCCTGATGTGGTGGCTATTTCGGCACTTCCCCA
TACATCTGCTGATGATTCTTCTGCTCCTTTGGATTTGGCGGCGGCTGGTTCCCAGCCCCGCCAGTCGTCATGA
Protein sequenceShow/hide protein sequence
MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGKFRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQL
GMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQYGEWLRATPFKTTLLRSKFGGAGSK
ADDGHDAPTTEDGAECAGLVRGSPPTVLATSSGDTSRKVDSTTGVDPVPTKNVTASIPTSTKITGLKPLDSENLMIVETACQEGHVDGTKGWKRRARDGPNESDTHFHTE
GITGGKRLYEGHRSPSDVILKKTKRTPDVVAISALPHTSADDSSAPLDLAAAGSQPRQSS