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Lag0023080 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023080
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBromo domain-containing protein
Genome locationchr7:43870238..43873550
RNA-Seq ExpressionLag0023080
SyntenyLag0023080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]5.0e-1364.79Show/hide
Query:  ELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQRLQESE
        EL+  ASQV++G LDMNED+IFV+      HG VRGYGVGVTP +LF SSS V DLE  LNE E RL ESE
Subjt:  ELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQRLQESE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]7.8e-1467.19Show/hide
Query:  LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQ
        ++SYASQV+DGTLDMN+D+IFV+      H  VRGYGVGV  S+LFGSSS V DLERRLNES++
Subjt:  LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQ

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]6.0e-1448.96Show/hide
Query:  IPQEITREDSEYLAKLWKSTEYQSE-------LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQ
        + +E+   D     ++W  T   ++       ++SYASQV+DGTLDMN+D+IFV+      H  VRGYGVGV  S+LFGSSS V DLERRLNES++
Subjt:  IPQEITREDSEYLAKLWKSTEYQSE-------LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQ

XP_030970921.1 uncharacterized protein LOC115991358 [Quercus lobata]5.2e-1053.42Show/hide
Query:  LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSN-VRDLERRLNESEQRLQESEQQ
        L +  +QV +G L +++D++FV+      HGRVRGYG GVTP+KL+GSSS+ + DLE+RL ESEQ+  ESEQ+
Subjt:  LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSN-VRDLERRLNESEQRLQESEQQ

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]2.0e-2260.18Show/hide
Query:  EKSVNAVAEALANIP-QEITREDSEYLAKLWKSTEYQSELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNE
        EK V    E  + I   E+T   +  LA    + E  S+L+SYASQV+DGTLDMNEDE FV+      HG V GYGVGVTPS+LFGSSS +RD ERRLNE
Subjt:  EKSVNAVAEALANIP-QEITREDSEYLAKLWKSTEYQSELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNE

Query:  SEQRLQESEQQRK
        SEQRLQE EQQRK
Subjt:  SEQRLQESEQQRK

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968282.9e-1448.96Show/hide
Query:  IPQEITREDSEYLAKLWKSTEYQSE-------LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQ
        + +E+   D     ++W  T   ++       ++SYASQV+DGTLDMN+D+IFV+      H  VRGYGVGV  S+LFGSSS V DLERRLNES++
Subjt:  IPQEITREDSEYLAKLWKSTEYQSE-------LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQ

A0A2N9HCP8 Uncharacterized protein1.8e-1133.12Show/hide
Query:  NAVAEALANIPQEITREDSEYLAKLWKSTEYQSE----------------------------------LESYASQVVDGTLDMNEDEIFVKFLDQRTHGR
        +A+ EA AN+P  I ++D   L   W + +Y  E                                  L S  +QV +G+L M+ED++FV+      HGR
Subjt:  NAVAEALANIPQEITREDSEYLAKLWKSTEYQSE----------------------------------LESYASQVVDGTLDMNEDEIFVKFLDQRTHGR

Query:  VRGYGVGVTPSKLFGSSSN-VRDLERRLNESEQRLQESEQQRKVEIACSEQGLCPLE
        VRGYG GVT +KL+GSSS+ + DLE+RL ESEQ   E+  +   ++   E+ +  L+
Subjt:  VRGYGVGVTPSKLFGSSSN-VRDLERRLNESEQRLQESEQQRKVEIACSEQGLCPLE

A0A2N9I580 Uncharacterized protein1.2e-1233.97Show/hide
Query:  NAVAEALANIPQEITREDSEYLAKLWKSTEY-------------------------------QSELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRG
        NA  EA AN+P  I ++D  YL   W S +Y                               +  L S  +QV +G+L M+ED++FV+      HGRVRG
Subjt:  NAVAEALANIPQEITREDSEYLAKLWKSTEY-------------------------------QSELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRG

Query:  YGVGVTPSKLF-GSSSNVRDLERRLNESEQRLQESEQQRKVEIACSEQGLCPLEGS
        YG GVTP++L+  SSS ++ LE+RL ESEQ+  E   +   ++   E+ +  L+ S
Subjt:  YGVGVTPSKLF-GSSSNVRDLERRLNESEQRLQESEQQRKVEIACSEQGLCPLEGS

A0A5A7U8E9 Uncharacterized protein2.4e-1364.79Show/hide
Query:  ELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQRLQESE
        EL+  ASQV++G LDMNED+IFV+      HG VRGYGVGVTP +LF SSS V DLE  LNE E RL ESE
Subjt:  ELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQRLQESE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X23.8e-1467.19Show/hide
Query:  LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQ
        ++SYASQV+DGTLDMN+D+IFV+      H  VRGYGVGV  S+LFGSSS V DLERRLNES++
Subjt:  LESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNVRDLERRLNESEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGCTTCTTATCACATAAAGCAAAGATCAGGGAAATTGGATCAACTATTGGTCATGAAAAGTCTGTTAATGCAGTTGCAGAAGCTTTGGCTAATATTCCACAAGA
AATTACAAGAGAAGATTCAGAATATCTTGCAAAGTTGTGGAAGTCAACTGAATATCAGTCGGAACTCGAATCATATGCTTCTCAAGTAGTTGATGGTACACTTGACATGA
ACGAGGATGAGATTTTTGTCAAGTTTTTGGACCAGAGAACACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTAAGCTATTTGGATCATCTTCTAATGTA
CGTGATCTTGAGCGTCGTCTTAATGAGTCTGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTCGAGATTGCTTGTAGTGAACAAGGCCTATGTCCACTGGAAGG
GAGTTATGTTTATTTGTTCACGGTGTTATGGGTAATTTTGAACCACCCAGATGCACAAGTAGCTGACAAGGACAATCGAGCAGAAATCAGACCGGAAGATGGACCAAAGA
GGCGAAACCGGCGAGCGGGACGGGCTAAGACCGAAGGGGTCGGGCTTTGGCCTGACCCCATGCTCGGCCTCGCCCAGGCCGAGGCCGACCCTCGGCCCGCTCGTGCGGCC
CGAGCTCGTCGGGCCCCGTTTGGTTCCTGTAGCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGCTTCTTATCACATAAAGCAAAGATCAGGGAAATTGGATCAACTATTGGTCATGAAAAGTCTGTTAATGCAGTTGCAGAAGCTTTGGCTAATATTCCACAAGA
AATTACAAGAGAAGATTCAGAATATCTTGCAAAGTTGTGGAAGTCAACTGAATATCAGTCGGAACTCGAATCATATGCTTCTCAAGTAGTTGATGGTACACTTGACATGA
ACGAGGATGAGATTTTTGTCAAGTTTTTGGACCAGAGAACACATGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTAAGCTATTTGGATCATCTTCTAATGTA
CGTGATCTTGAGCGTCGTCTTAATGAGTCTGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTCGAGATTGCTTGTAGTGAACAAGGCCTATGTCCACTGGAAGG
GAGTTATGTTTATTTGTTCACGGTGTTATGGGTAATTTTGAACCACCCAGATGCACAAGTAGCTGACAAGGACAATCGAGCAGAAATCAGACCGGAAGATGGACCAAAGA
GGCGAAACCGGCGAGCGGGACGGGCTAAGACCGAAGGGGTCGGGCTTTGGCCTGACCCCATGCTCGGCCTCGCCCAGGCCGAGGCCGACCCTCGGCCCGCTCGTGCGGCC
CGAGCTCGTCGGGCCCCGTTTGGTTCCTGTAGCCTCTAG
Protein sequenceShow/hide protein sequence
MKSFLSHKAKIREIGSTIGHEKSVNAVAEALANIPQEITREDSEYLAKLWKSTEYQSELESYASQVVDGTLDMNEDEIFVKFLDQRTHGRVRGYGVGVTPSKLFGSSSNV
RDLERRLNESEQRLQESEQQRKVEIACSEQGLCPLEGSYVYLFTVLWVILNHPDAQVADKDNRAEIRPEDGPKRRNRRAGRAKTEGVGLWPDPMLGLAQAEADPRPARAA
RARRAPFGSCSL