; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023081 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023081
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:43873613..43876255
RNA-Seq ExpressionLag0023081
SyntenyLag0023081
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]7.1e-2543.82Show/hide
Query:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ
        G  EA  CR F+ TLTG  R WF ++ +KSI S KELARAFVTQF G  +R +P   LLT+KQ   ESLKDY+ RFN E LQVEG  D   L+  ISG++
Subjt:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ

Query:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEEL------------EIQTRRERGRSQQE----QPSANGRGRSEVKEPQ
        DE+L+   G+    T+ E  +RAQ Y S  EL            +  T+R+R   ++     + S +G+GR   ++PQ
Subjt:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEEL------------EIQTRRERGRSQQE----QPSANGRGRSEVKEPQ

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.2e-2544.74Show/hide
Query:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ
        G  EA  CR F+ TL+G AR WF ++ + SI S K LA+AFVTQF+G RSR +P   LLT+KQ   ESL DY+ RFN E LQVEG  +  +L+A +S ++
Subjt:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ

Query:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG
        DE L    G+  P T+ E ++RAQ+Y S  E     R   G+   +    +G
Subjt:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]4.0e-2846.29Show/hide
Query:  EATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDER
        EA  CR F+ TLTG AR WF ++ + SI S KELA AFVTQF+G R + KP   LLT+KQ   ESLK+Y+ RFN E LQVEG  D  ALIA +SG++DER
Subjt:  EATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDER

Query:  LLNPIGESQPRTYVEFMTRAQRYTSTEEL------------EIQTRRERGRSQQE----QPSANGRGRSEVKEPQ
        L+   G+  P T++E ++RAQ+Y S  EL               T+RER   ++     + S +G GR   ++PQ
Subjt:  LLNPIGESQPRTYVEFMTRAQRYTSTEEL------------EIQTRRERGRSQQE----QPSANGRGRSEVKEPQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.9e-2542.46Show/hide
Query:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ
        G  EA  CR F+ TL G AR WF ++ + SI S K LARAFVTQF+G R R +P   LLT+KQ   ESL+DY+ RFN E LQVEG  D  +L+A +SG++
Subjt:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ

Query:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG----RGRSEVKEPQGCAKPKARFDRRT
        DE L    G+  P T+ E ++RAQRY S  E     R   G+    +   +G      R E ++      P  +F++ T
Subjt:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG----RGRSEVKEPQGCAKPKARFDRRT

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]2.7e-2434.09Show/hide
Query:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ
        G  +A  CR F LTL G AR+WF ++   SI S  +L+R F + F  AR R KP   LLTVKQ   E+L+DYI R+NNE+ QV+GYDDG AL   + GL+
Subjt:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ

Query:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANGRGRSEVKEPQGCAKPKARFDRRTIWRRVRQEAGGCNPRDMTRTWKARS
          +L   + +  P +Y E + RA++Y + EE      R + R+Q++  S  G+ + + +  +   +P     R       R E     PR         +
Subjt:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANGRGRSEVKEPQGCAKPKARFDRRTIWRRVRQEAGGCNPRDMTRTWKARS

Query:  SQHVKRGPGNFLSLPKPFPQ--KSVRTPGMTTTLEERLWEFPRP----PQAFSPEEYTHPWDDH
        SQ       NF  L  P  Q    VR P         L+  P P    P   +P +Y H   DH
Subjt:  SQHVKRGPGNFLSLPKPFPQ--KSVRTPGMTTTLEERLWEFPRP----PQAFSPEEYTHPWDDH

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166193.4e-2543.82Show/hide
Query:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ
        G  EA  CR F+ TLTG  R WF ++ +KSI S KELARAFVTQF G  +R +P   LLT+KQ   ESLKDY+ RFN E LQVEG  D   L+  ISG++
Subjt:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ

Query:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEEL------------EIQTRRERGRSQQE----QPSANGRGRSEVKEPQ
        DE+L+   G+    T+ E  +RAQ Y S  EL            +  T+R+R   ++     + S +G+GR   ++PQ
Subjt:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEEL------------EIQTRRERGRSQQE----QPSANGRGRSEVKEPQ

A0A6J1D7D2 uncharacterized protein LOC1110183071.5e-2544.74Show/hide
Query:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ
        G  EA  CR F+ TL+G AR WF ++ + SI S K LA+AFVTQF+G RSR +P   LLT+KQ   ESL DY+ RFN E LQVEG  +  +L+A +S ++
Subjt:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ

Query:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG
        DE L    G+  P T+ E ++RAQ+Y S  E     R   G+   +    +G
Subjt:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG

A0A6J1DWY0 uncharacterized protein LOC1110252939.0e-2642.46Show/hide
Query:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ
        G  EA  CR F+ TL G AR WF ++ + SI S K LARAFVTQF+G R R +P   LLT+KQ   ESL+DY+ RFN E LQVEG  D  +L+A +SG++
Subjt:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ

Query:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG----RGRSEVKEPQGCAKPKARFDRRT
        DE L    G+  P T+ E ++RAQRY S  E     R   G+    +   +G      R E ++      P  +F++ T
Subjt:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG----RGRSEVKEPQGCAKPKARFDRRT

A0A6J1DZ49 uncharacterized protein LOC1110248511.9e-2846.29Show/hide
Query:  EATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDER
        EA  CR F+ TLTG AR WF ++ + SI S KELA AFVTQF+G R + KP   LLT+KQ   ESLK+Y+ RFN E LQVEG  D  ALIA +SG++DER
Subjt:  EATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDER

Query:  LLNPIGESQPRTYVEFMTRAQRYTSTEEL------------EIQTRRERGRSQQE----QPSANGRGRSEVKEPQ
        L+   G+  P T++E ++RAQ+Y S  EL               T+RER   ++     + S +G GR   ++PQ
Subjt:  LLNPIGESQPRTYVEFMTRAQRYTSTEEL------------EIQTRRERGRSQQE----QPSANGRGRSEVKEPQ

A0A6J1E1E7 uncharacterized protein LOC1110255481.9e-2341.62Show/hide
Query:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ
        G  +A  CR F+ TL G AR WF ++ + SI S K LARAF+TQF+G R R +P   LLT+KQ   ESL DY+ RFN E LQ+EG  D  +L+A +SG++
Subjt:  GQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQ

Query:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG---RGRSEVKEPQGCAKPKAR
        DE L     +  P T+ E ++RAQRY S  E     R   G+   ++   +G   +G    K  +G  K   R
Subjt:  DERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANG---RGRSEVKEPQGCAKPKAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGGTATTTATACACCTCTTCGCCACTAAAGAAGGGGACCCGAACTGAATTATCGACTCTCTTCTCTTACTTTCCTACTCTCTTCCCATTTTCTGACTTAAGCAT
CGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCAGCGGTTTTTGCTGGTCTTGCAGTTGGCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGACCGCGCATCGGTGG
TGGTATGCAGGATGGATCGGGTTCAGAAACTAGAAAGAAACCTCGGGTATGAGCGGAAATCGCTGAACCAGACTGGGGACGACCTCGGTATGGAAAAGGTCGACCCTAAC
TTTGGAGACTGTTGTAAGGTTCCGTGTGCCCACGATGCTGTGGACCTGACCCAAGAGGACAACCAGCAAAAGAAGAGAGAGAGCCGGGAAGTTTCTGTATCCGACCAGCA
TCGAGAAGACAGAGGAAAAGGACGTCGGGTAGAAGATGGAGGTCAGATCCGACATGAGCACTCCTCGGCCGATGGCCGAGGCCGAGCAGAAGCCCAATCGCAAAAAGGCC
CGCAGAAGTTCAGCGCTAAAGACAGTGTCAGAAAGATCCCACAGAAGTCAATCAGTTCGGCTAAAGAATTGGCCCGAGCATTTGTTACGCAATTCCTCGGGGCCCGGAGC
CGACAGAAGCCTCAGATCAATTTGCTAACAGTAAAGCAGGGGCCCCGAGAAAGCTTGAAGGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGA
CGATGGATTTGCCTTGATTGCTGCGATTTCAGGTCTGCAAGATGAAAGACTGCTCAACCCGATCGGTGAAAGCCAGCCACGGACATACGTGGAATTCATGACCCGGGCAC
AAAGGTACACAAGCACCGAGGAACTTGAGATCCAAACAAGAAGAGAGAGAGGCCGAAGCCGGCAAGAGCAGCCCTCGGCCAATGGCCGAGGCCGATCAGAGGTGAAGAAG
CCGCAAGGTTGTGCGAAGCCAAAGGCCAGATTCGACAGATCATGGCCATACAACCCGAGAGTGCATCCAGTTACGAGACGAGATAGAAACCCTAATCCGAGAGGGTTACT
TGAAGGAGTTGGGCAAGGCAGAGTCGGGCAAGATGAAGCGACAAGCTGCCGAGGCTTCGCGCTAACACTCACGGGTTTGGCAAGACAATGGTTTAGTAAGATCCCACAGA
AGTCAATCGGTTCGGCTAAAGAATTGGCCCGAGCATTTGTTACGCAATTCCTCGGGGCCCGGAGCCGACAGAAGCCTCAGATCAATTTGCTAACAGTAAAGCAGGGGCCC
CGAGAAAGCTTGAAGGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTTGCCTTGATTGCTGCGATTTCAGGTCTGCAAGATGA
AAGACTGCTCAACCCGATCGGTGAAAGCCAGCCACGGACATACGTGGAATTCATGACCCGGGCACAAAGGTACACAAGCACCGAGGAACTTGAGATCCAAACAAGAAGAG
AGAGAGGCCGAAGCCAACAAGAGCAACCCTCAGCCAATGGCCGAGGCCGATCAGAGGTGAAGGAGCCGCAAGGTTGTGCGAAGCCAAAGGCCAGATTCGACAGGAGGACC
ATCTGGAGGAGAGTTAGGCAGGAAGCGGGAGGCTGCAATCCGAGAGACATGACAAGAACCTGGAAAGCAAGAAGTTCACAGCACGTGAAGAGAGGCCCTGGGAATTTCCT
AAGCCTCCCCAAGCCTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGACGCTTGAAGAGAGGCTCTGGGAATTTCCTAGGCCTCCCCAAGCCTTTTCCCCAG
AAGAGTATACGCACCCTTGGGATGACCACGACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGGTATTTATACACCTCTTCGCCACTAAAGAAGGGGACCCGAACTGAATTATCGACTCTCTTCTCTTACTTTCCTACTCTCTTCCCATTTTCTGACTTAAGCAT
CGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCAGCGGTTTTTGCTGGTCTTGCAGTTGGCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGACCGCGCATCGGTGG
TGGTATGCAGGATGGATCGGGTTCAGAAACTAGAAAGAAACCTCGGGTATGAGCGGAAATCGCTGAACCAGACTGGGGACGACCTCGGTATGGAAAAGGTCGACCCTAAC
TTTGGAGACTGTTGTAAGGTTCCGTGTGCCCACGATGCTGTGGACCTGACCCAAGAGGACAACCAGCAAAAGAAGAGAGAGAGCCGGGAAGTTTCTGTATCCGACCAGCA
TCGAGAAGACAGAGGAAAAGGACGTCGGGTAGAAGATGGAGGTCAGATCCGACATGAGCACTCCTCGGCCGATGGCCGAGGCCGAGCAGAAGCCCAATCGCAAAAAGGCC
CGCAGAAGTTCAGCGCTAAAGACAGTGTCAGAAAGATCCCACAGAAGTCAATCAGTTCGGCTAAAGAATTGGCCCGAGCATTTGTTACGCAATTCCTCGGGGCCCGGAGC
CGACAGAAGCCTCAGATCAATTTGCTAACAGTAAAGCAGGGGCCCCGAGAAAGCTTGAAGGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGA
CGATGGATTTGCCTTGATTGCTGCGATTTCAGGTCTGCAAGATGAAAGACTGCTCAACCCGATCGGTGAAAGCCAGCCACGGACATACGTGGAATTCATGACCCGGGCAC
AAAGGTACACAAGCACCGAGGAACTTGAGATCCAAACAAGAAGAGAGAGAGGCCGAAGCCGGCAAGAGCAGCCCTCGGCCAATGGCCGAGGCCGATCAGAGGTGAAGAAG
CCGCAAGGTTGTGCGAAGCCAAAGGCCAGATTCGACAGATCATGGCCATACAACCCGAGAGTGCATCCAGTTACGAGACGAGATAGAAACCCTAATCCGAGAGGGTTACT
TGAAGGAGTTGGGCAAGGCAGAGTCGGGCAAGATGAAGCGACAAGCTGCCGAGGCTTCGCGCTAACACTCACGGGTTTGGCAAGACAATGGTTTAGTAAGATCCCACAGA
AGTCAATCGGTTCGGCTAAAGAATTGGCCCGAGCATTTGTTACGCAATTCCTCGGGGCCCGGAGCCGACAGAAGCCTCAGATCAATTTGCTAACAGTAAAGCAGGGGCCC
CGAGAAAGCTTGAAGGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTTGCCTTGATTGCTGCGATTTCAGGTCTGCAAGATGA
AAGACTGCTCAACCCGATCGGTGAAAGCCAGCCACGGACATACGTGGAATTCATGACCCGGGCACAAAGGTACACAAGCACCGAGGAACTTGAGATCCAAACAAGAAGAG
AGAGAGGCCGAAGCCAACAAGAGCAACCCTCAGCCAATGGCCGAGGCCGATCAGAGGTGAAGGAGCCGCAAGGTTGTGCGAAGCCAAAGGCCAGATTCGACAGGAGGACC
ATCTGGAGGAGAGTTAGGCAGGAAGCGGGAGGCTGCAATCCGAGAGACATGACAAGAACCTGGAAAGCAAGAAGTTCACAGCACGTGAAGAGAGGCCCTGGGAATTTCCT
AAGCCTCCCCAAGCCTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGACGCTTGAAGAGAGGCTCTGGGAATTTCCTAGGCCTCCCCAAGCCTTTTCCCCAG
AAGAGTATACGCACCCTTGGGATGACCACGACGCTTGA
Protein sequenceShow/hide protein sequence
MSRYLYTSSPLKKGTRTELSTLFSYFPTLFPFSDLSIGGGVAYTTPVCSGFCWSCSWRRLWGRVLASSDRASVVVCRMDRVQKLERNLGYERKSLNQTGDDLGMEKVDPN
FGDCCKVPCAHDAVDLTQEDNQQKKRESREVSVSDQHREDRGKGRRVEDGGQIRHEHSSADGRGRAEAQSQKGPQKFSAKDSVRKIPQKSISSAKELARAFVTQFLGARS
RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSRQEQPSANGRGRSEVKK
PQGCAKPKARFDRSWPYNPRVHPVTRRDRNPNPRGLLEGVGQGRVGQDEATSCRGFALTLTGLARQWFSKIPQKSIGSAKELARAFVTQFLGARSRQKPQINLLTVKQGP
RESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNPIGESQPRTYVEFMTRAQRYTSTEELEIQTRRERGRSQQEQPSANGRGRSEVKEPQGCAKPKARFDRRT
IWRRVRQEAGGCNPRDMTRTWKARSSQHVKRGPGNFLSLPKPFPQKSVRTPGMTTTLEERLWEFPRPPQAFSPEEYTHPWDDHDA