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Lag0023093 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023093
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr7:44097740..44098204
RNA-Seq ExpressionLag0023093
SyntenyLag0023093
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]9.4e-3255.56Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS AD+LS TA+ AM L    L+ S  PLVGFGGE+V P G IE PV FG G  +VT+M++ LVV+   +YN ILGR T+H L+++ STYHQ +KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GVG + GEQ++SRECY+ ++R+ DR
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]2.1e-3152.38Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS  D+ S TA+ AM L  + L+ S TPL+GFGGE++ P+G IELP+ F     ++TRM++FLVVD   +YNTIL R T+H L+++ STYHQ +KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GVG + GEQ++SRECY+ ++R  D+
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]3.6e-3156.35Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS AD++S TA+ AM L    L+ S  PLVGFGGE+V   G IELPV FG G  +VT+M++FLVV+   +YN ILGR T+H LK++ STYHQ  KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GVG + GEQ++SRECY  ++R+ DR
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]4.2e-3257.14Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS AD++S TA+ AM LE   L+ S  PLVGFGGE+V   G IELPV FG G   VT+M++FLVV+   +YN ILGRLT+H LK + STYHQ +KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GV  + GEQ++SRECY+ ++R  DR
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]1.4e-3053.97Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS AD++S T +  M L    L+ S  PL+GFG E+V P G IEL V FG G  +VT+M++FLVVD   +YN ILGR T+H LK++ STYHQ +KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GVG + GEQ++SRECY+ ++R  DR
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141474.5e-3255.56Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS AD+LS TA+ AM L    L+ S  PLVGFGGE+V P G IE PV FG G  +VT+M++ LVV+   +YN ILGR T+H L+++ STYHQ +KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GVG + GEQ++SRECY+ ++R+ DR
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

A0A6J1CZ14 uncharacterized protein LOC1110159011.0e-3152.38Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS  D+ S TA+ AM L  + L+ S TPL+GFGGE++ P+G IELP+ F     ++TRM++FLVVD   +YNTIL R T+H L+++ STYHQ +KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GVG + GEQ++SRECY+ ++R  D+
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

A0A6J1DQY2 uncharacterized protein LOC1110223211.7e-3156.35Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS AD++S TA+ AM L    L+ S  PLVGFGGE+V   G IELPV FG G  +VT+M++FLVV+   +YN ILGR T+H LK++ STYHQ  KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GVG + GEQ++SRECY  ++R+ DR
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

A0A6J1DRG9 uncharacterized protein LOC1110235872.0e-3257.14Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS AD++S TA+ AM LE   L+ S  PLVGFGGE+V   G IELPV FG G   VT+M++FLVV+   +YN ILGRLT+H LK + STYHQ +KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GV  + GEQ++SRECY+ ++R  DR
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

A0A6J1DXV4 uncharacterized protein LOC1110251476.6e-3153.97Show/hide
Query:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE
        GGS AD++S T +  M L    L+ S  PL+GFG E+V P G IEL V FG G  +VT+M++FLVVD   +YN ILGR T+H LK++ STYHQ +KFPT 
Subjt:  GGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTE

Query:  EGVGVVHGEQKMSRECYFMALRNIDR
         GVG + GEQ++SRECY+ ++R  DR
Subjt:  EGVGVVHGEQKMSRECYFMALRNIDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGAAGCTATGCTGATGTACTCTCAACCACTGCGTTCAACGCCATGAAGCTGGAAAACGATCGCCTGAGGCCGAGCTTCACACCGCTGGTGGGGTTTGGCGGAGA
AAAAGTAAGCCCAAGAGGAAGCATCGAACTGCCAGTGAGGTTTGGGGAAGGACTGCATACAGTAACAAGGATGATCAACTTTCTAGTGGTAGACTGCGCCCCAGCATATA
ATACCATCTTGGGACGACTCACCCTACATGGACTTAAATCTGTAGCCTCAACGTACCACCAAGTCCTGAAATTCCCAACCGAAGAAGGTGTAGGAGTAGTGCATGGCGAG
CAAAAGATGTCGAGGGAATGTTACTTTATGGCGCTCAGGAACATCGATAGGAAGGTTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAG
CTATCCCCTTCCAATGAAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGAAGCTATGCTGATGTACTCTCAACCACTGCGTTCAACGCCATGAAGCTGGAAAACGATCGCCTGAGGCCGAGCTTCACACCGCTGGTGGGGTTTGGCGGAGA
AAAAGTAAGCCCAAGAGGAAGCATCGAACTGCCAGTGAGGTTTGGGGAAGGACTGCATACAGTAACAAGGATGATCAACTTTCTAGTGGTAGACTGCGCCCCAGCATATA
ATACCATCTTGGGACGACTCACCCTACATGGACTTAAATCTGTAGCCTCAACGTACCACCAAGTCCTGAAATTCCCAACCGAAGAAGGTGTAGGAGTAGTGCATGGCGAG
CAAAAGATGTCGAGGGAATGTTACTTTATGGCGCTCAGGAACATCGATAGGAAGGTTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAG
CTATCCCCTTCCAATGAAACATTGA
Protein sequenceShow/hide protein sequence
MGGSYADVLSTTAFNAMKLENDRLRPSFTPLVGFGGEKVSPRGSIELPVRFGEGLHTVTRMINFLVVDCAPAYNTILGRLTLHGLKSVASTYHQVLKFPTEEGVGVVHGE
QKMSRECYFMALRNIDRKVQATSALGDGRGRAFEGSSYPLPMKH