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Lag0023096 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023096
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr7:44104243..44105113
RNA-Seq ExpressionLag0023096
SyntenyLag0023096
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]1.8e-3061.68Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L  ++LK S  PLVGFGGERV PEG IE  VTFG G  +VTK+++ LVV+  S+YNAILGRPT+H ++AI STYH+ +KFPTP GVG +KGEQ+ SRE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]8.8e-3057.94Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L  E+LK SLTPL+GFGGER+ P+G IEL +TF     ++T++++FLVVD  S+YN IL RPT+H ++AI STYH+ +KFPTP GVG +KGEQ+ SRE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]4.4e-2961.32Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L +E LK SLTPL+GFGGERV P G IEL VTF  G  ++TK+++FLVVD  S+YNAIL R T++ +KAI STYH+ +KFPTP GVG +KGEQ+  RE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTAL
        CY+T +
Subjt:  CYWTAL

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.0e-2962.62Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L  ++LK S  PLVGFGGERV  EG IEL VTFG G  +VTK+++FLVV+  S+YNAILGRPT+H +KAI STYH+  KFPT  GVG +KGEQ+ SRE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTALK
        CY T+++
Subjt:  CYWTALK

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]1.1e-2961.68Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L  ++LK S  PL+GFG ERV PEG IEL VTFG G  +VTK+++FLVVD  S+YNAILGR T+H +KAI STYH+ +KFPT  GVG +KGEQ+ SRE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141478.6e-3161.68Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L  ++LK S  PLVGFGGERV PEG IE  VTFG G  +VTK+++ LVV+  S+YNAILGRPT+H ++AI STYH+ +KFPTP GVG +KGEQ+ SRE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

A0A6J1CZ14 uncharacterized protein LOC1110159014.2e-3057.94Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L  E+LK SLTPL+GFGGER+ P+G IEL +TF     ++T++++FLVVD  S+YN IL RPT+H ++AI STYH+ +KFPTP GVG +KGEQ+ SRE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

A0A6J1DKR9 uncharacterized protein LOC1110214382.1e-2961.32Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L +E LK SLTPL+GFGGERV P G IEL VTF  G  ++TK+++FLVVD  S+YNAIL R T++ +KAI STYH+ +KFPTP GVG +KGEQ+  RE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTAL
        CY+T +
Subjt:  CYWTAL

A0A6J1DQY2 uncharacterized protein LOC1110223219.5e-3062.62Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L  ++LK S  PLVGFGGERV  EG IEL VTFG G  +VTK+++FLVV+  S+YNAILGRPT+H +KAI STYH+  KFPT  GVG +KGEQ+ SRE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTALK
        CY T+++
Subjt:  CYWTALK

A0A6J1DXV4 uncharacterized protein LOC1110251475.5e-3061.68Show/hide
Query:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE
        M L  ++LK S  PL+GFG ERV PEG IEL VTFG G  +VTK+++FLVVD  S+YNAILGR T+H +KAI STYH+ +KFPT  GVG +KGEQ+ SRE
Subjt:  MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRE

Query:  CYWTALK
        CY+T+++
Subjt:  CYWTALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAACATAGAACTTCTTGTGACCTTTGGGGA
TGGACAGAATGCAGTGACAAAGATCATAAACTTCCTAGTTGTAGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGGCCCACCTTGCATGAAATGAAGGCCATAGCTT
CAACTTACCATAAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTGTCAAAGGAGAGCAGAAGGCATCACGAGAGTGTTACTGGACCGCGCTGAAAGCAAAGTGT
GCACAAGGCAACCGACTCAAGCATCACACTACGCGAGCCTGGACTACCGAGTCTACCCCGCCTCATCCAGACTTGAGATTACGTGAGCCTGGACTACCGAGTCTACCTCA
CCTCATCTGGCTTGAGCATTTTCACATCATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCATACTTGAGGCTATGTGATCCTGGACCATGGGTCTACCTCACAA
GCCATCACATCATGCGAGCTTGGACTACCGATCTACCTCGCCTCATCCAAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAACATAGAACTTCTTGTGACCTTTGGGGA
TGGACAGAATGCAGTGACAAAGATCATAAACTTCCTAGTTGTAGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGGCCCACCTTGCATGAAATGAAGGCCATAGCTT
CAACTTACCATAAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTGTCAAAGGAGAGCAGAAGGCATCACGAGAGTGTTACTGGACCGCGCTGAAAGCAAAGTGT
GCACAAGGCAACCGACTCAAGCATCACACTACGCGAGCCTGGACTACCGAGTCTACCCCGCCTCATCCAGACTTGAGATTACGTGAGCCTGGACTACCGAGTCTACCTCA
CCTCATCTGGCTTGAGCATTTTCACATCATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCATACTTGAGGCTATGTGATCCTGGACCATGGGTCTACCTCACAA
GCCATCACATCATGCGAGCTTGGACTACCGATCTACCTCGCCTCATCCAAACTTGA
Protein sequenceShow/hide protein sequence
MQLERELLKPSLTPLVGFGGERVTPEGNIELLVTFGDGQNAVTKIINFLVVDCMSAYNAILGRPTLHEMKAIASTYHKLLKFPTPNGVGVVKGEQKASRECYWTALKAKC
AQGNRLKHHTTRAWTTESTPPHPDLRLREPGLPSLPHLIWLEHFHIMRAWTTESTSPHPYLRLCDPGPWVYLTSHHIMRAWTTDLPRLIQT