; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023102 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023102
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr7:44235765..44239776
RNA-Seq ExpressionLag0023102
SyntenyLag0023102
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN78270.1 hypothetical protein VITISV_006712 [Vitis vinifera]1.4e-0451.06Show/hide
Query:  RTEKKICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAAVDLAMCN
        R+  +IC +  H ALDYYNRMN++FQG HPP++LAAM    +    N
Subjt:  RTEKKICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAAVDLAMCN

KAA8538438.1 hypothetical protein F0562_028016 [Nyssa sinensis]1.9e-0453.7Show/hide
Query:  PEPSPEKKDERRRRRRTEKKICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTA
        P PSP        R R+  +IC + GH ALD +NRMN+SFQG HPP++LAAM A
Subjt:  PEPSPEKKDERRRRRRTEKKICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTA

KAA8540914.1 hypothetical protein F0562_024948 [Nyssa sinensis]2.4e-0453.7Show/hide
Query:  PEPSPEKKDERRRRRRTEKKICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTA
        P PSP        R R+  +IC + GH ALD +NRMN+SFQG HPP++LAAM A
Subjt:  PEPSPEKKDERRRRRRTEKKICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTA

KAF8406331.1 hypothetical protein HHK36_008417 [Tetracentron sinense]1.4e-0469.44Show/hide
Query:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA
        +IC+K GH A+D YNRMN +FQG HPP+QLAAMTA+
Subjt:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA

XP_016902697.1 PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo]1.9e-0475.76Show/hide
Query:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAM
        +IC+K GH ALD YNRMNFS+QG HPPSQL AM
Subjt:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAM

TrEMBL top hitse value%identityAlignment
A0A2N9EE76 Uncharacterized protein6.2e-0666.67Show/hide
Query:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA
        +IC KP H  +D YNRMN+S+QGCHPP++LAAMT+A
Subjt:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA

A0A2N9F5W2 Uncharacterized protein8.1e-0669.44Show/hide
Query:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA
        +IC K GH ALD YNRMNFS+QGCHPP++LAA+ +A
Subjt:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA

A0A2N9HW45 Uncharacterized protein8.1e-0669.44Show/hide
Query:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA
        +IC K GH ALD YNRMNFS+QGCHPP++LAA+ +A
Subjt:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA

A0A5B7B5R4 Uncharacterized protein (Fragment)2.4e-0569.44Show/hide
Query:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA
        +ICNKPGH ALD Y+RM+ S+ G HPP+QLAAMTA+
Subjt:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAA

A0A5B7BD59 Retrotran_gag_3 domain-containing protein6.2e-0660.47Show/hide
Query:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAAVDLAMCN
        +ICNKP H ALD Y+RMN+++QG HPPSQLAAM A+   +  N
Subjt:  KICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAAVDLAMCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGCAGAGAATCGAGGCGATTAATAAGCTCGGACTGAACAGTAAGCTTATCAGCAGTCCGAACACAGTAGAACAAACCCTTCCATTGCTTATTCATATCCCCAT
TGGAGAGGTTCGTTTGAGTTGGAAGCCATGTCTTGATGATTACACGGAGGGTTTTGTCTCAAGTCGCCTTGTTGGAGGACGCCAAAAGCTTGATCGAATTCGACCCGGAA
AAAACCGGTTTTCCCTTGCGGGAAAACTAGTTTTTCCGGGTTTCGATCCCGACCGAGAAGTGACCGGGAAGTTTCGTCTTCTCCGGCACCGATCGTTCCTTCTACTCCGA
AAACCCCTCCATAAAACCCGCAAACTCCGTGAAGACGCCGGAGAAGAAGGGAGAAGAAGACGCTTGAAGACGCTTGAAGAAGTCGCTGGAAAAGAAGCCGTCGGAGAAGA
AGGGAGAAGAAGACGCTTGAAGAAGTCGCCGGAACCGGAGCCGTCGCCGGAAAAGAAAGACGAACGGAGAAGAAGACGCCGGACGGAGAAGAAGATTTGCAATAAACCTG
GCCATGGAGCACTCGACTATTACAACCGGATGAATTTTTCCTTTCAAGGATGTCATCCTCCGTCTCAACTTGCTGCTATGACCGCTGCTGTTGATCTTGCTATGTGTAAC
GACCCGACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGCAGAGAATCGAGGCGATTAATAAGCTCGGACTGAACAGTAAGCTTATCAGCAGTCCGAACACAGTAGAACAAACCCTTCCATTGCTTATTCATATCCCCAT
TGGAGAGGTTCGTTTGAGTTGGAAGCCATGTCTTGATGATTACACGGAGGGTTTTGTCTCAAGTCGCCTTGTTGGAGGACGCCAAAAGCTTGATCGAATTCGACCCGGAA
AAAACCGGTTTTCCCTTGCGGGAAAACTAGTTTTTCCGGGTTTCGATCCCGACCGAGAAGTGACCGGGAAGTTTCGTCTTCTCCGGCACCGATCGTTCCTTCTACTCCGA
AAACCCCTCCATAAAACCCGCAAACTCCGTGAAGACGCCGGAGAAGAAGGGAGAAGAAGACGCTTGAAGACGCTTGAAGAAGTCGCTGGAAAAGAAGCCGTCGGAGAAGA
AGGGAGAAGAAGACGCTTGAAGAAGTCGCCGGAACCGGAGCCGTCGCCGGAAAAGAAAGACGAACGGAGAAGAAGACGCCGGACGGAGAAGAAGATTTGCAATAAACCTG
GCCATGGAGCACTCGACTATTACAACCGGATGAATTTTTCCTTTCAAGGATGTCATCCTCCGTCTCAACTTGCTGCTATGACCGCTGCTGTTGATCTTGCTATGTGTAAC
GACCCGACTTCTTAA
Protein sequenceShow/hide protein sequence
MEEQRIEAINKLGLNSKLISSPNTVEQTLPLLIHIPIGEVRLSWKPCLDDYTEGFVSSRLVGGRQKLDRIRPGKNRFSLAGKLVFPGFDPDREVTGKFRLLRHRSFLLLR
KPLHKTRKLREDAGEEGRRRRLKTLEEVAGKEAVGEEGRRRRLKKSPEPEPSPEKKDERRRRRRTEKKICNKPGHGALDYYNRMNFSFQGCHPPSQLAAMTAAVDLAMCN
DPTS