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Lag0023103 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023103
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr7:44247069..44247371
RNA-Seq ExpressionLag0023103
SyntenyLag0023103
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG97282.1 hypothetical protein Prudu_006352 [Prunus dulcis]3.8e-1044.21Show/hide
Query:  LCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL
        LC HDNNC  +FD   FLIQ+K+T K L +G+S+ GLYP+P      G   SSS    S  +   S    S F   K  + LWH RLGHP+ +V+
Subjt:  LCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL

BBN70032.1 hypothetical protein Prudu_1359S000200 [Prunus dulcis]3.8e-1044.21Show/hide
Query:  LCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL
        LC HDNNC  +FD   FLIQ+K+T K L +G+S+ GLYP+P      G   SSS    S  +   S    S F   K  + LWH RLGHP+ +V+
Subjt:  LCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL

KAB2615004.1 hypothetical protein D8674_021592 [Pyrus ussuriensis x Pyrus communis]1.0e-0738.89Show/hide
Query:  DNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDV
        DNNC  +FDA++F IQ+K+TG++LY+G   +GLYP+ F   +             RPS      P S F     ++ LWH RLGHP+ ++
Subjt:  DNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDV

RWR76373.1 putative polyprotein [Cinnamomum micranthum f. kanehirae]2.8e-0838.46Show/hide
Query:  HDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDV
        +DNNC F+FD+  F I++K +GK L+RGQSK+GLYP P    +     S++D               + F   + T  +WH RLGHP+  V
Subjt:  HDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDV

XP_022158189.1 uncharacterized protein LOC111024722 [Momordica charantia]3.5e-1143.96Show/hide
Query:  DNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL
        DN+CIFV+D+ WFLIQ+K+T   LY+G+S +GLYP+P          SSS  + +R  +     P +   L K  + LWH RLGH SP +L
Subjt:  DNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL

TrEMBL top hitse value%identityAlignment
A0A2N9FZ66 Uncharacterized protein1.4e-1042.86Show/hide
Query:  DNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL
        DNNC   FD++ FLIQ+  +GKVLY+G SK+GLYP+             S  ++S  +   +  P+S F  +K    LWH RLGHPS  VL
Subjt:  DNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL

A0A2N9I8F3 Uncharacterized protein1.4e-1046.88Show/hide
Query:  SLCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL
        +LC  DNNC   FD++ FLIQ+  +GKVLY+G SK+GLYP+         + SSS  +   PS   S  P+S F  +K    LWH RLGHPS  VL
Subjt:  SLCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL

A0A4Y1QZM5 Integrase catalytic domain-containing protein1.9e-1044.21Show/hide
Query:  LCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL
        LC HDNNC  +FD   FLIQ+K+T K L +G+S+ GLYP+P      G   SSS    S  +   S    S F   K  + LWH RLGHP+ +V+
Subjt:  LCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL

A0A5H2XTF7 Integrase catalytic domain-containing protein1.9e-1044.21Show/hide
Query:  LCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL
        LC HDNNC  +FD   FLIQ+K+T K L +G+S+ GLYP+P      G   SSS    S  +   S    S F   K  + LWH RLGHP+ +V+
Subjt:  LCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL

A0A6J1DYN6 uncharacterized protein LOC1110247221.7e-1143.96Show/hide
Query:  DNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL
        DN+CIFV+D+ WFLIQ+K+T   LY+G+S +GLYP+P          SSS  + +R  +     P +   L K  + LWH RLGH SP +L
Subjt:  DNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTCTCTCTGTGCTATCATGATAATAATTGTATCTTTGTGTTTGATGCTCATTGGTTTCTTATTCAAGAAAAAATAACGGGCAAGGTTCTGTACAGAGGACAGAG
TAAAGATGGTTTGTATCCCCTTCCATTTGGTGGTTTCAAAGGTGGTGAGGTTGTTTCGTCCTCTGATCAGGCTGTTTCACGACCTTCAGTTGTTTACTCTTGTTTCCCTA
TTTCTACTTTTACTTTGAATAAAAGGACAACCGATTTGTGGCACTTTAGACTTGGACATCCATCTCCTGATGTCCTTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTCTCTCTGTGCTATCATGATAATAATTGTATCTTTGTGTTTGATGCTCATTGGTTTCTTATTCAAGAAAAAATAACGGGCAAGGTTCTGTACAGAGGACAGAG
TAAAGATGGTTTGTATCCCCTTCCATTTGGTGGTTTCAAAGGTGGTGAGGTTGTTTCGTCCTCTGATCAGGCTGTTTCACGACCTTCAGTTGTTTACTCTTGTTTCCCTA
TTTCTACTTTTACTTTGAATAAAAGGACAACCGATTTGTGGCACTTTAGACTTGGACATCCATCTCCTGATGTCCTTTCGTAA
Protein sequenceShow/hide protein sequence
MFVSLCYHDNNCIFVFDAHWFLIQEKITGKVLYRGQSKDGLYPLPFGGFKGGEVVSSSDQAVSRPSVVYSCFPISTFTLNKRTTDLWHFRLGHPSPDVLS