| GenBank top hits | e value | %identity | Alignment |
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| KAG6583479.1 DNA-directed RNA polymerase III subunit 1, partial [Cucurbita argyrosperma subsp. sororia] | 4.0e-93 | 94.38 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTKQPYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEK+Y DFLRKMRNPKLE LRK EL KKIIKKC+ LTS NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
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| XP_004148776.1 DNA-directed RNA polymerase III subunit 1 isoform X1 [Cucumis sativus] | 4.8e-94 | 93.82 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSG+EISK+AEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGY++LALPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEK++KDFLRKMRNPKLEALRK +LVKKIIKKCSTLT+GNKS +CSRCGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
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| XP_008465290.2 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit 1 [Cucumis melo] | 2.5e-95 | 94.38 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSG+EISK+AEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKC+TCHANFGDCPGHYGY++L+LPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEK+YKDFLRKMRNPKLEALRKC+LVKKIIKKCSTLT+GNKS KCSRCGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
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| XP_038894318.1 DNA-directed RNA polymerase III subunit 1 isoform X1 [Benincasa hispida] | 2.8e-94 | 94.94 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MNRAQ EGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKC TCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEK+YKDFLRK+RNPKLE LRK +LVKKIIKKCSTLT+GNKS KCSRCGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
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| XP_038894319.1 DNA-directed RNA polymerase III subunit 1 isoform X2 [Benincasa hispida] | 2.8e-94 | 94.94 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MNRAQ EGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKC TCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEK+YKDFLRK+RNPKLE LRK +LVKKIIKKCSTLT+GNKS KCSRCGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LSG9 DNA-directed RNA polymerase | 6.3e-100 | 93.16 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSG+EISK+AEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGY++LALPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGLDFTFYFDVNSS
FNVGYFTTILEILKCICKSCSRILLEEK++KDFLRKMRNPKLEALRK +LVKKIIKKCSTLT+GNKS +CSRCGYLNGLDFTFYF V SS
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGLDFTFYFDVNSS
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| A0A1S3CNX9 DNA-directed RNA polymerase subunit | 1.2e-95 | 94.38 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSG+EISK+AEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKC+TCHANFGDCPGHYGY++L+LPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEK+YKDFLRKMRNPKLEALRKC+LVKKIIKKCSTLT+GNKS KCSRCGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
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| A0A2I4DDG5 DNA-directed RNA polymerase subunit | 1.5e-72 | 72.32 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
M AQ E + FTK PYIEDVGPRKIKSM+F+TFS SEISK+AEVQVYKG YYD R PI+GGLLDPRMGPANK C CATCH +FG+CPGH+GYL LA+PV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLN
+NVGY +TIL+ILKCICKSC+ ILLEE + K++L+KMR+PK+E L+K EL+K I+KKC+ LTSGNK++KCSRCGY+N
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLN
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| A0A6J1HLT9 DNA-directed RNA polymerase subunit | 4.4e-93 | 93.82 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MN+AQVEGLVFTKQPYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEK+Y DFLRKMRNPKLE LRK EL KKIIKKC+ LTS NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
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| A0A6J1I0L0 DNA-directed RNA polymerase subunit | 1.3e-92 | 93.26 | Show/hide |
Query: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
MN+ QVEGLVFTKQPYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEK+Y DFLRKMRNPKLE LRK EL KKIIKKC+ LTS NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4JXF9 DNA-directed RNA polymerase III subunit 1 | 3.7e-57 | 61.54 | Show/hide |
Query: FTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
FTK+PYIEDVGP KIKS+ F+ S E+ K AEVQV+ YD + KP + GLLDPRMGP NK C TC NF +CPGHYGYL L LPV+NVGYF IL
Subjt: FTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
Query: EILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
+ILKCICK CS +LL+EK+Y+D LRKMRNP++E L+K EL K ++KKCST+ S + + C +CGYLNG+
Subjt: EILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
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| O94666 DNA-directed RNA polymerase III subunit rpc1 | 2.1e-28 | 40.24 | Show/hide |
Query: IEDVGPRKIKSMQFTTFSGSEISKMAEVQV-YKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKC
I+D P++IK +QF E K V+V + LY T R P + G LD MG +NK CATC + DC GH+GY+ LALPVF++GYF L IL+
Subjt: IEDVGPRKIKSMQFTTFSGSEISKMAEVQV-YKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKC
Query: ICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
ICK CS +LL ++ + FL+ +R P ++ LR+ ++ K+I C K +CS+C + G+
Subjt: ICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
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| P04051 DNA-directed RNA polymerase III subunit RPC1 | 4.6e-31 | 41.25 | Show/hide |
Query: PRKIKSMQFTTFSGSEISKMAEVQVYKGLYYD--TTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKS
P++IK ++F+ S ++I +EV+V +D R P G LDP+MG ++ +CATCH N C GH+G+L LALPVF++GYF ++IL+ ICK+
Subjt: PRKIKSMQFTTFSGSEISKMAEVQVYKGLYYD--TTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKS
Query: CSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
CS ILL E + FL ++R P ++ LR+ ++KKI+ +C K +C CG LNG+
Subjt: CSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
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| Q6BI69 DNA-directed RNA polymerase III subunit RPC1 | 7.5e-34 | 40 | Show/hide |
Query: IEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTT--RKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILK
+ DV P+ IK ++F S +I +EV+V+ YD R P DGG LD +MG ++ +CATCH N C GH+G++ LALPVF+VGYF +++L+
Subjt: IEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTT--RKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILK
Query: CICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
CICK+CS +LL+E+ + FL +R P ++ LR+ +++KK++++C K +C C ++NG+
Subjt: CICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
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| Q86AQ5 DNA-directed RNA polymerase III subunit rpc1 | 2.3e-30 | 41.72 | Show/hide |
Query: EDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYD-TTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCI
ED P+KI +QF S +I +++ VQ+ +D RKP G+LD ++G ++K C TC + DC GH+GY+ L LPVF++GY I+ IL+ I
Subjt: EDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYD-TTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCI
Query: CKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
CKSCS ILL E+ + +LRKMRN K++ L++ L+KKI +C K+ +C +CG NG+
Subjt: CKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G40030.1 nuclear RNA polymerase D1B | 6.4e-04 | 32.65 | Show/hide |
Query: KCATCHANFGD-CPGHYGYLSLALPVFNVGYFTTILEILKCICKSCSRI
KC +C A D C GH+GY+ L +P+++ + + ++L +C C +I
Subjt: KCATCHANFGD-CPGHYGYLSLALPVFNVGYFTTILEILKCICKSCSRI
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| AT4G35800.1 RNA polymerase II large subunit | 8.0e-23 | 39.44 | Show/hide |
Query: KIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTR--KPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKSCS
K++ +QF S EI +M+ + V + +TT KP GGL D R+G ++ KC TC AN +CPGH+GYL LA P+++VG+ T+L I++C+C +CS
Subjt: KIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTR--KPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKSCS
Query: RILLEEKIYK-DFLRKMRNPKLEALRKCELVKKIIKKCSTLT
+IL +E+ +K K++NPK +KKI+ C T
Subjt: RILLEEKIYK-DFLRKMRNPKLEALRKCELVKKIIKKCSTLT
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| AT5G60040.1 nuclear RNA polymerase C1 | 2.6e-58 | 61.54 | Show/hide |
Query: FTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
FTK+PYIEDVGP KIKS+ F+ S E+ K AEVQV+ YD + KP + GLLDPRMGP NK C TC NF +CPGHYGYL L LPV+NVGYF IL
Subjt: FTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
Query: EILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
+ILKCICK CS +LL+EK+Y+D LRKMRNP++E L+K EL K ++KKCST+ S + + C +CGYLNG+
Subjt: EILKCICKSCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
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| AT5G60040.2 nuclear RNA polymerase C1 | 7.2e-56 | 58.1 | Show/hide |
Query: FTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
FTK+PYIEDVGP KIKS+ F+ S E+ K AEVQV+ YD + KP + GLLDPRMGP NK C TC NF +CPGHYGYL L LPV+NVGYF IL
Subjt: FTKQPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
Query: EILKCICK----------SCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
+ILKCICK CS +LL+EK+Y+D LRKMRNP++E L+K EL K ++KKCST+ S + + C +CGYLNG+
Subjt: EILKCICK----------SCSRILLEEKIYKDFLRKMRNPKLEALRKCELVKKIIKKCSTLTSGNKSMKCSRCGYLNGL
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