; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023122 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023122
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionYrdC domain-containing protein
Genome locationchr7:44473715..44478284
RNA-Seq ExpressionLag0023122
SyntenyLag0023122
Gene Ontology termsGO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK21224.1 yrdC domain-containing protein [Cucumis melo var. makuwa]6.8e-12167.92Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        M DSLSLIRTFATFPSSHLG+ N G+VSFL +NRGSRVSF KT WS EKCCM VEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
        V    LG        E  W       GV               V  S+  LG     +  VV                       + N      S+EAV+
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVG VSDITR+A+TDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGLDSIGVRVP ADFIRLISRRS TALALTSANLSGQ
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI
        PSSVCVNDFE+LWQHCAYVY+GGVLPAGRAGSTIVDLT+RG FKIIRAGSA++QT+ATL+RYSL E AA+I
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI

XP_022948702.1 yrdC domain-containing protein, mitochondrial [Cucurbita moschata]5.2e-12166.49Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        MV+ LS+IRTFATFPSS LGAP+ G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEA EAL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
                                                                                                     CSSEAVN
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVP ADFIRLISRRSGTALALTSANLSGQ
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS
        PSSVCV+DFE+LWQHCAYVY+GG+LPAGRAGSTI+DLTKRG FKIIRAGSAKEQTVATLERYSL EEA S
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS

XP_022998259.1 yrdC domain-containing protein, mitochondrial [Cucurbita maxima]4.3e-12367.57Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        MV+ LSLIRTFATFPSS LGAPN G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEATEAL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
                                                                                                     CSSEAVN
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVP ADFIRLISRRSGTALALTSANLSG+
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS
        PSSVCVNDFE+LWQHCAYVY+GGVLPAGRAGSTI+DLTKRG+FKIIRAGSAKEQTVATLERYSL EEA S
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS

XP_023521571.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo]2.1e-12267.3Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        MV+ LSLIRTFATFPSS LGAPN G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEATEAL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
                                                                                                     CSSEAVN
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVP ADFIRLISRRSGTALALTSANLSGQ
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS
        PSSVCVNDFE+LWQHCAYVY+GGVLPAGRAGSTI+DLTKRG FKIIRAGSAKEQTVATL+RYSL E+A S
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]1.1e-12367.39Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        MV+SLSLIRTF TFPSSHLG+PN GLVSFL QNRGSRVSFPKT WS EKCCMRVEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
                                                                                                     CSSEAV+
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPGLDSIGVRVP ADFIRLISRRS TALALTSANLSGQ
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI
        PSSVCVNDFE+LWQHCAYVY+GGVLPAGRAGSTI+DLT+RG +KI+RAGSAKEQTVA LERYSL EEAASI
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein4.1e-11964.96Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        M DSLSLIRTF TFPSS LG+ N G+VSFL +NRGSRVSF KT WS EKCCMRVEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
                                                                                                     CS+EAV+
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGLDSIGVRVP ADFIRLISRRS TALALTSANLSGQ
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI
        PSSVCVNDFE+LWQHCAYVY+GGVLPAGRAGSTI+DLT++G FKIIRAGSA+EQT+ATLERYSL E AA+I
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI

A0A5A7T5W1 YrdC domain-containing protein4.5e-11864.42Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        M DSLSLIRTFATFPSSHLG+ N G+VSFL +NRGSRVSF KT WS EKCCM VEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
                                                                                                     CS+EAV+
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVG VSDITR+A+TDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGLDSIGVRVP ADFIRLISRRS TALALTSANLSGQ
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI
        PSSVCVNDFE+LWQHCAYVY+GGVLPAGRAGSTIVDLT+RG FKIIRAGSA++QT+ATL+RYSL E AA+I
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI

A0A5D3DCB7 YrdC domain-containing protein3.3e-12167.92Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        M DSLSLIRTFATFPSSHLG+ N G+VSFL +NRGSRVSF KT WS EKCCM VEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
        V    LG        E  W       GV               V  S+  LG     +  VV                       + N      S+EAV+
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVG VSDITR+A+TDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGLDSIGVRVP ADFIRLISRRS TALALTSANLSGQ
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI
        PSSVCVNDFE+LWQHCAYVY+GGVLPAGRAGSTIVDLT+RG FKIIRAGSA++QT+ATL+RYSL E AA+I
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI

A0A6J1G9Z7 yrdC domain-containing protein, mitochondrial2.5e-12166.49Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        MV+ LS+IRTFATFPSS LGAP+ G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEA EAL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
                                                                                                     CSSEAVN
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVP ADFIRLISRRSGTALALTSANLSGQ
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS
        PSSVCV+DFE+LWQHCAYVY+GG+LPAGRAGSTI+DLTKRG FKIIRAGSAKEQTVATLERYSL EEA S
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial2.1e-12367.57Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG
        MV+ LSLIRTFATFPSS LGAPN G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEATEAL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGG

Query:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN
                                                                                                     CSSEAVN
Subjt:  VGEGLLGWNFDIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ
        RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVP ADFIRLISRRSGTALALTSANLSG+
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQ

Query:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS
        PSSVCVNDFE+LWQHCAYVY+GGVLPAGRAGSTI+DLTKRG+FKIIRAGSAKEQTVATLERYSL EEA S
Subjt:  PSSVCVNDFESLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAAS

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial3.9e-3445.98Show/hide
Query:  SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSA
        SEA+  +Y +KGR  T PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP    +G+R+P   F++ +++  G  LALTSA
Subjt:  SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSA

Query:  NLSGQPSSVCVNDFESLWQHCAYVYNGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSL
        NLS Q SS+ V +F+ LW H + + +GG +     P  R GST+VDL+  G F IIR G A E T A L+ Y L
Subjt:  NLSGQPSSVCVNDFESLWQHCAYVYNGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSL

Q3U5F4 YrdC domain-containing protein, mitochondrial1.2e-3043.6Show/hide
Query:  SSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTS
        SS A++ +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP    +G+R+P   F+  +++  G  LALTS
Subjt:  SSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTS

Query:  ANLSGQPSSVCVNDFESLWQHCAYVYNGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLER
        ANLS Q SS+ V +F+ LW H + V +GG +     P  R GST+VDL+  G F IIR G A E T + L++
Subjt:  ANLSGQPSSVCVNDFESLWQHCAYVYNGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLER

Q499R4 YrdC domain-containing protein, mitochondrial6.8e-3144Show/hide
Query:  SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSA
        S A++ +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP    +G+R+P   F+  +++  G  LALTSA
Subjt:  SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSA

Query:  NLSGQPSSVCVNDFESLWQHCAYVYNGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE-RYSL
        NLS Q SS+ V +F+ LW H + V +GG +     P  R GST+VDL+  G F IIR+G A E T A L+ +Y L
Subjt:  NLSGQPSSVCVNDFESLWQHCAYVYNGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE-RYSL

Q60369 Putative threonylcarbamoyl-AMP synthase3.8e-1336.44Show/hide
Query:  SSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKR--GESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALAL
        + +AV ++Y IK R+   PL+ICV D ++I ++A  + L   ++D  LPGP+T++LK+  G   I+ K      D IG+R+P    IR +S      L  
Subjt:  SSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKR--GESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALAL

Query:  TSANLSGQPSSVCVNDFE
        TSAN+SG+ S   V++ +
Subjt:  TSANLSGQPSSVCVNDFE

Q86U90 YrdC domain-containing protein, mitochondrial4.4e-3043.65Show/hide
Query:  SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSA
        S A+  +Y +KGR    PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP    +G+R+P   F++ +++     LALTSA
Subjt:  SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSA

Query:  NLSGQPSSVCVNDFESLWQHCAYVYNGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL-ERYSLSEEAAS
        NLS Q SS+ V +F+ LW   + V +GG +     P  R GST+VDL+  G F IIR G A E T A L ++Y L    AS
Subjt:  NLSGQPSSVCVNDFESLWQHCAYVYNGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL-ERYSLSEEAAS

Arabidopsis top hitse value%identityAlignment
AT5G60590.1 DHBP synthase RibB-like alpha/beta domain8.0e-2736.78Show/hide
Query:  PSSHL---GAPNCGLVSFLHQNRGSRVSFPKTK-WSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGGVGEGLLGWNF
        PSS L   G       S  +Q+R  R    K   WS E+    V +    + PA+EA+AQEA EA+++ KVIAVPTDTLYG ACDA              
Subjt:  PSSHL---GAPNCGLVSFLHQNRGSRVSFPKTK-WSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGGVGEGLLGWNF

Query:  DIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVNRIYEIKGRKL
                                                                                           CS EAV+RIYEIKGRKL
Subjt:  DIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVNRIYEIKGRKL

Query:  TSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKR
        TSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+R
Subjt:  TSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain4.5e-7849.3Show/hide
Query:  PSSHL---GAPNCGLVSFLHQNRGSRVSFPKTK-WSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGGVGEGLLGWNF
        PSS L   G       S  +Q+R  R    K   WS E+    V +    + PA+EA+AQEA EA+++ KVIAVPTDTLYG ACDA              
Subjt:  PSSHL---GAPNCGLVSFLHQNRGSRVSFPKTK-WSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGGVGEGLLGWNF

Query:  DIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVNRIYEIKGRKL
                                                                                           CS EAV+RIYEIKGRKL
Subjt:  DIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVNRIYEIKGRKL

Query:  TSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQPSSVCVNDFE
        TSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+RGESSILEKSLNPG+ +IGVRVP  +FIR +SR SG+ LALTSANLSG  SSVCV DFE
Subjt:  TSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQPSSVCVNDFE

Query:  SLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEE
        +LWQHCAYVY+GG+LP+GRAGSTIVDLTK G +KIIR GSAK+ TVA LE+Y L EE
Subjt:  SLWQHCAYVYNGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCATCTAGGCGCTCCCAATTGTGGGCTAGTTTCGTTCTTGCATCAAAATAGAGGATCAAG
GGTGAGTTTTCCTAAAACGAAATGGAGTTTCGAAAAATGTTGTATGCGCGTGGAGAACAGTTTGCAAGCACTTCGCCCTGCCTCCGAAGCTTTTGCTCAAGAGGCTACCG
AAGCTCTTAGAGCTGGAAAGGTTATCGCTGTTCCCACTGATACTCTCTACGGACTCGCTTGTGATGCTTGGTTAGGTGGTGTGGGTGAAGGATTGCTTGGCTGGAATTTT
GATATTGATACGGAGGAGGATGAGTGGAGAATCTTCAAGGAGAAACTGGGAGTACTTTTGTTGTGGCGTTTGAACCTTCCTTCACCCTTTCAGAAGATGGTCAAGGAATC
TGTTGCTTTGCTAGGGGAAGGGTGTTCAGTGAAGGAGGGGGTGGTCGAGTTTGTTTTTGATACTAGAAGAGTGATTTTGGTGCTAAAGGAACGCTTTTCTAATCCTTGCT
CTTTGATTAATAATGGATTACGAGAAGTTTGTTCTTCTGAAGCAGTCAATAGGATTTACGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGAT
GTCTCTGACATAACTCGTTTTGCTGTAACAGACCATTTGCCTCCTGGTTTGCTTGATTCTCTCCTTCCAGGACCTGTGACTGTTGTATTAAAAAGAGGCGAGTCGAGTAT
TCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGCTGCTGACTTTATTCGGCTTATTTCCCGTAGATCAGGGACGGCATTGGCTCTTACAA
GTGCTAATTTAAGTGGACAACCAAGCAGTGTCTGTGTTAATGATTTTGAAAGCCTGTGGCAACATTGTGCTTATGTATATAATGGTGGTGTTCTTCCTGCTGGACGAGCA
GGTTCTACAATTGTCGACCTCACCAAGCGAGGGATATTTAAGATTATCAGAGCTGGAAGTGCAAAGGAGCAGACTGTTGCAACGCTTGAAAGGTATTCACTGTCAGAAGA
AGCAGCTAGTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGACAGTCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCATCTAGGCGCTCCCAATTGTGGGCTAGTTTCGTTCTTGCATCAAAATAGAGGATCAAG
GGTGAGTTTTCCTAAAACGAAATGGAGTTTCGAAAAATGTTGTATGCGCGTGGAGAACAGTTTGCAAGCACTTCGCCCTGCCTCCGAAGCTTTTGCTCAAGAGGCTACCG
AAGCTCTTAGAGCTGGAAAGGTTATCGCTGTTCCCACTGATACTCTCTACGGACTCGCTTGTGATGCTTGGTTAGGTGGTGTGGGTGAAGGATTGCTTGGCTGGAATTTT
GATATTGATACGGAGGAGGATGAGTGGAGAATCTTCAAGGAGAAACTGGGAGTACTTTTGTTGTGGCGTTTGAACCTTCCTTCACCCTTTCAGAAGATGGTCAAGGAATC
TGTTGCTTTGCTAGGGGAAGGGTGTTCAGTGAAGGAGGGGGTGGTCGAGTTTGTTTTTGATACTAGAAGAGTGATTTTGGTGCTAAAGGAACGCTTTTCTAATCCTTGCT
CTTTGATTAATAATGGATTACGAGAAGTTTGTTCTTCTGAAGCAGTCAATAGGATTTACGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGAT
GTCTCTGACATAACTCGTTTTGCTGTAACAGACCATTTGCCTCCTGGTTTGCTTGATTCTCTCCTTCCAGGACCTGTGACTGTTGTATTAAAAAGAGGCGAGTCGAGTAT
TCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGCTGCTGACTTTATTCGGCTTATTTCCCGTAGATCAGGGACGGCATTGGCTCTTACAA
GTGCTAATTTAAGTGGACAACCAAGCAGTGTCTGTGTTAATGATTTTGAAAGCCTGTGGCAACATTGTGCTTATGTATATAATGGTGGTGTTCTTCCTGCTGGACGAGCA
GGTTCTACAATTGTCGACCTCACCAAGCGAGGGATATTTAAGATTATCAGAGCTGGAAGTGCAAAGGAGCAGACTGTTGCAACGCTTGAAAGGTATTCACTGTCAGAAGA
AGCAGCTAGTATTTGA
Protein sequenceShow/hide protein sequence
MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTKWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWLGGVGEGLLGWNF
DIDTEEDEWRIFKEKLGVLLLWRLNLPSPFQKMVKESVALLGEGCSVKEGVVEFVFDTRRVILVLKERFSNPCSLINNGLREVCSSEAVNRIYEIKGRKLTSPLAICVGD
VSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPAADFIRLISRRSGTALALTSANLSGQPSSVCVNDFESLWQHCAYVYNGGVLPAGRA
GSTIVDLTKRGIFKIIRAGSAKEQTVATLERYSLSEEAASI