; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023138 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023138
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:44823279..44823992
RNA-Seq ExpressionLag0023138
SyntenyLag0023138
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.0e-5344.78Show/hide
Query:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRV-VHGLQVEILGKNIFIFRFENEGERNRVFRQGP
        M    L+++W    LTS ED+IAV  D  A++ TG  L   LI KL S R ++  V++ T   AW++      V+I+G NIF+F F    +RNR+ R GP
Subjt:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRV-VHGLQVEILGKNIFIFRFENEGERNRVFRQGP

Query:  WSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSW
        W+FD+ L++++ P+   KP D  F +V+ W+HF+DL L   N+ MA RLGNA+G +EDV+S       G+ +RVRVR D+ +PL RG+K+ LD  +GG W
Subjt:  WSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSW

Query:  IAVQYERLPEFCFFCGIIGHILKDCGRASV
        I +QYERLP+F + CG + HILKDC    V
Subjt:  IAVQYERLPEFCFFCGIIGHILKDCGRASV

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]6.6e-6148.71Show/hide
Query:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPW
        MD   L+ DW K  LTS EDEIA+  D  AV      L   L+GKL + R ++ +V+ R    AW+V H L VE +GKN+F+F F  E + NRV + GPW
Subjt:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPW

Query:  SFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWI
         FDK L+VL+ P      S+  F+ VAFWIH +DLP+ W N+ MA RLGNA+G + DVD        GAS+R+RV +DI++PLRRG+KI +D  +GG WI
Subjt:  SFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWI

Query:  AVQYERLPEFCFFCGIIGHILKDCGRASVGVQ
         +QYERLP+FC+FCG+IGH   DC    +  Q
Subjt:  AVQYERLPEFCFFCGIIGHILKDCGRASVGVQ

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.8e-4842.86Show/hide
Query:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVV-HGLQVEILGKNIFIFRFENEGERNRVFRQGP
        M    L+++W    LTS E+E A+  D  A   TGS L   L+GKL   R +   VM+ T  +AW++  +  +V+ LG N+F+F F    +RN++++ GP
Subjt:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVV-HGLQVEILGKNIFIFRFENEGERNRVFRQGP

Query:  WSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSW
        W+FD+ L+++  P+  + PS+  F+ +  W+ F+DLPL    ++MA RLGNALG +E+ D  +     G+++RVRV LDIS+PLRRG+K+ LD  IGG+W
Subjt:  WSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSW

Query:  IAVQYERLPEFCFFCGI
        I +QYERLP+FC+ CG+
Subjt:  IAVQYERLPEFCFFCGI

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]6.5e-4040.09Show/hide
Query:  LCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFP
        L LTS ED +            G S   CL+GKL + R    E M+ T  S W+   G+QV ++G N+F+F F +  ++ RV   GPW+FDK LL+L   
Subjt:  LCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFP

Query:  IRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCF
           ++PSD + + V FW+H  +LPL   N+++ E +GNA+G++ D+D  +G    G +MR+RV LD+ +PLRRG+K+ L  S    W+  +YERLP +C+
Subjt:  IRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCF

Query:  FCGIIGHILKDC
        FCG +GH  ++C
Subjt:  FCGIIGHILKDC

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]3.8e-4039.01Show/hide
Query:  TLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLG---CCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWS
        +LV     L LTS ED +     R   D T   +G    CL+GKL + R    E M+ T  S W+   G+QV ++G N+F+F F +  ++ RV   GPW+
Subjt:  TLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLG---CCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWS

Query:  FDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIA
        FDK LL+L      ++PSD + + V FW+H  +LPL   N+++ + +GNA+G++ D+D  +G    G +MR+RV +D+ +PLRRG+K+ L  S    W+ 
Subjt:  FDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIA

Query:  VQYERLPEFCFFCGIIGHILKDC
         +YERLP +C+FCG +GH  ++C
Subjt:  VQYERLPEFCFFCGIIGHILKDC

TrEMBL top hitse value%identityAlignment
A0A2N9GWE9 Uncharacterized protein1.5e-3736.65Show/hide
Query:  LVQDWSKLCLTSVEDE-IAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAW-RVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFD
        LV++W K  LT  E   + +AAD   V R   S   CL+GKL + ++   E ++ T    W  V  G+    +G+N+F+F+F ++ ER RV    PW FD
Subjt:  LVQDWSKLCLTSVEDE-IAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAW-RVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFD

Query:  KFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQ
          LL+L+        S  +FS   FW+ FY +PL +  ++  E++G+  G+ E+VD        G  +RVR+ LDI++P+ RG +++  +S+G  W++ +
Subjt:  KFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQ

Query:  YERLPEFCFFCGIIGHILKDC
        YERLP  CF CG+IGH+ +DC
Subjt:  YERLPEFCFFCGIIGHILKDC

A0A6J1BSZ1 uncharacterized protein LOC1110054815.0e-5444.78Show/hide
Query:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRV-VHGLQVEILGKNIFIFRFENEGERNRVFRQGP
        M    L+++W    LTS ED+IAV  D  A++ TG  L   LI KL S R ++  V++ T   AW++      V+I+G NIF+F F    +RNR+ R GP
Subjt:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRV-VHGLQVEILGKNIFIFRFENEGERNRVFRQGP

Query:  WSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSW
        W+FD+ L++++ P+   KP D  F +V+ W+HF+DL L   N+ MA RLGNA+G +EDV+S       G+ +RVRVR D+ +PL RG+K+ LD  +GG W
Subjt:  WSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSW

Query:  IAVQYERLPEFCFFCGIIGHILKDCGRASV
        I +QYERLP+F + CG + HILKDC    V
Subjt:  IAVQYERLPEFCFFCGIIGHILKDCGRASV

A0A6J1D765 uncharacterized protein LOC1110179021.5e-3736.53Show/hide
Query:  WSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVL
        W     T+ E+E  V  DR     T  ++  C++ KL + + ++ E +R    S WRV +  + E LG NI++  F++  E++RV   GPW+F+K LLVL
Subjt:  WSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVL

Query:  EFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPE
          P    +P D  F+  AFWI  +++P +  + EMA  LG  LG+ E+++        G  +RVRV++D+S+PLRRG+K+   D     W  ++YE+LP+
Subjt:  EFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPE

Query:  FCFFCGIIGHILKDCGRAS
        FC+ CG IGH  ++C + S
Subjt:  FCFFCGIIGHILKDCGRAS

A0A6J1DU55 uncharacterized protein LOC1110231353.2e-6148.71Show/hide
Query:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPW
        MD   L+ DW K  LTS EDEIA+  D  AV      L   L+GKL + R ++ +V+ R    AW+V H L VE +GKN+F+F F  E + NRV + GPW
Subjt:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPW

Query:  SFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWI
         FDK L+VL+ P      S+  F+ VAFWIH +DLP+ W N+ MA RLGNA+G + DVD        GAS+R+RV +DI++PLRRG+KI +D  +GG WI
Subjt:  SFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWI

Query:  AVQYERLPEFCFFCGIIGHILKDCGRASVGVQ
         +QYERLP+FC+FCG+IGH   DC    +  Q
Subjt:  AVQYERLPEFCFFCGIIGHILKDCGRASVGVQ

A0A6J1DX30 uncharacterized protein LOC1110248741.8e-4842.86Show/hide
Query:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVV-HGLQVEILGKNIFIFRFENEGERNRVFRQGP
        M    L+++W    LTS E+E A+  D  A   TGS L   L+GKL   R +   VM+ T  +AW++  +  +V+ LG N+F+F F    +RN++++ GP
Subjt:  MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVV-HGLQVEILGKNIFIFRFENEGERNRVFRQGP

Query:  WSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSW
        W+FD+ L+++  P+  + PS+  F+ +  W+ F+DLPL    ++MA RLGNALG +E+ D  +     G+++RVRV LDIS+PLRRG+K+ LD  IGG+W
Subjt:  WSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSW

Query:  IAVQYERLPEFCFFCGI
        I +QYERLP+FC+ CG+
Subjt:  IAVQYERLPEFCFFCGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G13450.1 unknown protein8.8e-1126.71Show/hide
Query:  AWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNG
        AW + + +   +L      F F++E +   V R+ PW ++ + +  +     L  + +  +S+  W+    +PL +  +E A  + + LGE   +D  + 
Subjt:  AWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNG

Query:  FHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC
             A +RVR+R  I+  LR  ++II  DS   + I+ QYERL   C  C  + H    C
Subjt:  FHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC

AT3G31430.1 unknown protein7.2e-1328.48Show/hide
Query:  VVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHH
        +VHG    I+    F F F  E     V R+GPW+F+ ++++L+      +P    F  + FW+    +P  + N+ + E +G ALG+  D D       
Subjt:  VVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHH

Query:  LGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC
             RV +  DI+ PLR          +  + +  +YERL  FC  CG++ H    C
Subjt:  LGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC

AT3G42140.1 zinc ion binding;nucleic acid binding1.4e-0826.28Show/hide
Query:  EILGKNIFI----FRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLK-PSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLG
        E++G+ + I    F F++E     + R+GPWSF+ ++ V++   R  K  SD  F  + FWI    +PL +    +  R+  ++GE              
Subjt:  EILGKNIFI----FRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLK-PSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLG

Query:  ASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC
             R+ L +   L R V +          +  QYE+L  FC  CG++ H   +C
Subjt:  ASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAATGACTCTAGTACAAGATTGGTCAAAGTTGTGTTTGACATCAGTGGAGGATGAAATCGCGGTAGCTGCTGACAGACCGGCGGTGGATAGAACTGGTTCCTC
GCTTGGATGTTGTTTGATTGGCAAGCTCCAATCACATCGATTTCTGGCTACGGAAGTGATGAGGAGAACATTTTCTTCAGCTTGGAGAGTGGTTCATGGATTGCAAGTGG
AGATACTTGGCAAGAATATCTTCATTTTCAGGTTCGAAAATGAAGGAGAACGGAATCGGGTTTTTAGGCAGGGGCCGTGGAGCTTTGATAAGTTCCTCCTGGTCTTAGAA
TTTCCTATCCGAGGGCTTAAGCCATCTGATTATCGCTTTTCGTCTGTCGCCTTCTGGATTCATTTCTATGATTTGCCCTTAGATTGGTACAATCAGGAGATGGCAGAGCG
GCTCGGAAATGCGCTTGGTGAGTATGAAGACGTCGATAGTCGTAATGGGTTTCACCATCTGGGGGCGAGCATGCGAGTGAGAGTCAGGTTGGATATTTCTCGGCCTCTTC
GAAGGGGGGTCAAAATTATTTTGGACGACTCCATAGGTGGTAGCTGGATTGCAGTTCAGTACGAGCGGTTACCTGAATTTTGCTTCTTTTGTGGAATTATTGGTCACATA
CTCAAAGATTGCGGAAGAGCGAGCGTAGGTGTTCAGGGACTCTGCCTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAATGACTCTAGTACAAGATTGGTCAAAGTTGTGTTTGACATCAGTGGAGGATGAAATCGCGGTAGCTGCTGACAGACCGGCGGTGGATAGAACTGGTTCCTC
GCTTGGATGTTGTTTGATTGGCAAGCTCCAATCACATCGATTTCTGGCTACGGAAGTGATGAGGAGAACATTTTCTTCAGCTTGGAGAGTGGTTCATGGATTGCAAGTGG
AGATACTTGGCAAGAATATCTTCATTTTCAGGTTCGAAAATGAAGGAGAACGGAATCGGGTTTTTAGGCAGGGGCCGTGGAGCTTTGATAAGTTCCTCCTGGTCTTAGAA
TTTCCTATCCGAGGGCTTAAGCCATCTGATTATCGCTTTTCGTCTGTCGCCTTCTGGATTCATTTCTATGATTTGCCCTTAGATTGGTACAATCAGGAGATGGCAGAGCG
GCTCGGAAATGCGCTTGGTGAGTATGAAGACGTCGATAGTCGTAATGGGTTTCACCATCTGGGGGCGAGCATGCGAGTGAGAGTCAGGTTGGATATTTCTCGGCCTCTTC
GAAGGGGGGTCAAAATTATTTTGGACGACTCCATAGGTGGTAGCTGGATTGCAGTTCAGTACGAGCGGTTACCTGAATTTTGCTTCTTTTGTGGAATTATTGGTCACATA
CTCAAAGATTGCGGAAGAGCGAGCGTAGGTGTTCAGGGACTCTGCCTGCTTTGA
Protein sequenceShow/hide protein sequence
MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLE
FPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHI
LKDCGRASVGVQGLCLL