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Lag0023152 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023152
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:45009454..45009981
RNA-Seq ExpressionLag0023152
SyntenyLag0023152
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]9.1e-0743.08Show/hide
Query:  KLNTGATWFDARGAGGLGWVVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKE---INQTLS
        KLN+ A+W +  G GG+ WV+HDS GS +C   + + RKW +K+LE K ++ G+K    I +T+S
Subjt:  KLNTGATWFDARGAGGLGWVVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKE---INQTLS

MCH94979.1 cytochrome P450 [Trifolium medium]2.6e-0631.25Show/hide
Query:  KGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCF
        K A+++W LWN+ N    +NT E+   L  + +    EW +  ++N +      Q  +  W+KP+  ++K N  A + +A G   +GW V DS G  V  
Subjt:  KGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCF

Query:  GVQRITRKWEIKLLEAKTILLGIKEINQ
        G   I  +  I   EA  IL  +KE+ Q
Subjt:  GVQRITRKWEIKLLEAKTILLGIKEINQ

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]3.6e-1132.05Show/hide
Query:  MVENLNKEDTTKGAIIMWRLWNHGNRN----HTSNTMEAPTVLIKEIESN------IKEWESSYLKNPKPKRLRSQVSL--VVWKKPKPNFWKLNTGATW
        +V  L+ E+     +I W++W   NR+     T +  +    ++  I SN      I +   S   +    R R  +++  V W  P  N WKLNT A+W
Subjt:  MVENLNKEDTTKGAIIMWRLWNHGNRN----HTSNTMEAPTVLIKEIESN------IKEWESSYLKNPKPKRLRSQVSL--VVWKKPKPNFWKLNTGATW

Query:  FDARGAGGLGWVVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKEIN-QTLSP
         + R  GG+GW++ D  G +V  G  +I  K EI  LE  TI+ G++ IN Q+ SP
Subjt:  FDARGAGGLGWVVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKEIN-QTLSP

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.1e-0727.54Show/hide
Query:  MVENLNKEDTTKGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQV-SLVVWKKPKPNFWKLNTGATWFDARGAGGLGW
        M++  + ED     I  W +WNH N         + + +I+++   +   ESSY        L   + + + W+ P  + W LN  A+W D+   GG+GW
Subjt:  MVENLNKEDTTKGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQV-SLVVWKKPKPNFWKLNTGATWFDARGAGGLGW

Query:  VVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKEI
        ++   +G +V  G + +     +KLLEA  IL G++ +
Subjt:  VVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKEI

XP_042980091.1 uncharacterized protein LOC122310272 [Carya illinoinensis]1.5e-0629.66Show/hide
Query:  MVENLNKEDTTKGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWV
        M+E LNKE+  + A+I+  +W   N     N+   P ++I+  +  +K+++ +  K        S  +L +WKKP  NF+KLN G          G+G +
Subjt:  MVENLNKEDTTKGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWV

Query:  VHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGI-----KEINQT
        + DSNG ++  G  + TR+       A++  L I     KEI  T
Subjt:  VHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGI-----KEINQT

TrEMBL top hitse value%identityAlignment
A0A392N724 Cytochrome P450 (Fragment)1.3e-0631.25Show/hide
Query:  KGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCF
        K A+++W LWN+ N    +NT E+   L  + +    EW +  ++N +      Q  +  W+KP+  ++K N  A + +A G   +GW V DS G  V  
Subjt:  KGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCF

Query:  GVQRITRKWEIKLLEAKTILLGIKEINQ
        G   I  +  I   EA  IL  +KE+ Q
Subjt:  GVQRITRKWEIKLLEAKTILLGIKEINQ

A0A6D2KM87 RNase H domain-containing protein4.9e-0625.78Show/hide
Query:  IMWRLWNHGNR-NHTSNTMEAPTVLIKEIESNIKEWESSY-LKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCFGV
        ++WR+W + N   H      A  V  K +E + +EWE    +K  + K +  + S   W+ P    WK NT  +W   +   G+GW++ D NG+++  G 
Subjt:  IMWRLWNHGNR-NHTSNTMEAPTVLIKEIESNIKEWESSY-LKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCFGV

Query:  Q---RITRKWEIKLLEAKTILLGIKEIN
        +   R+    E +L   +  ++ +  +N
Subjt:  Q---RITRKWEIKLLEAKTILLGIKEIN

A0A6J1CQG0 uncharacterized protein LOC1110132161.7e-1132.05Show/hide
Query:  MVENLNKEDTTKGAIIMWRLWNHGNRN----HTSNTMEAPTVLIKEIESN------IKEWESSYLKNPKPKRLRSQVSL--VVWKKPKPNFWKLNTGATW
        +V  L+ E+     +I W++W   NR+     T +  +    ++  I SN      I +   S   +    R R  +++  V W  P  N WKLNT A+W
Subjt:  MVENLNKEDTTKGAIIMWRLWNHGNRN----HTSNTMEAPTVLIKEIESN------IKEWESSYLKNPKPKRLRSQVSL--VVWKKPKPNFWKLNTGATW

Query:  FDARGAGGLGWVVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKEIN-QTLSP
         + R  GG+GW++ D  G +V  G  +I  K EI  LE  TI+ G++ IN Q+ SP
Subjt:  FDARGAGGLGWVVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKEIN-QTLSP

A0A6J1DNV9 uncharacterized protein LOC1110224035.2e-0827.54Show/hide
Query:  MVENLNKEDTTKGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQV-SLVVWKKPKPNFWKLNTGATWFDARGAGGLGW
        M++  + ED     I  W +WNH N         + + +I+++   +   ESSY        L   + + + W+ P  + W LN  A+W D+   GG+GW
Subjt:  MVENLNKEDTTKGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQV-SLVVWKKPKPNFWKLNTGATWFDARGAGGLGW

Query:  VVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKEI
        ++   +G +V  G + +     +KLLEA  IL G++ +
Subjt:  VVHDSNGSLVCFGVQRITRKWEIKLLEAKTILLGIKEI

A0A6J5VSP2 Uncharacterized protein8.3e-0630Show/hide
Query:  MVENLNKEDTTKGAII-----MWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLK-NPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGA
        M+  LN  +    AI      +WR+W   N          PT  +  +   + E+ ++     P+P +  S  + + W KP P   K+N+ A W   R  
Subjt:  MVENLNKEDTTKGAII-----MWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLK-NPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGA

Query:  GGLGWVVHDSNGSLVCFGVQ
        GG+GWV+ DS G L+C G Q
Subjt:  GGLGWVVHDSNGSLVCFGVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.2e-0628.57Show/hide
Query:  IMWRLWNHGNR-NHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSL-VVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCFGV
        ++WRLW   N         +AP VL + +E + +EW +      K    + + +L V WK P   + K NT ATW       G+GW++ + +G ++  G 
Subjt:  IMWRLWNHGNR-NHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSL-VVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCFGV

Query:  QRITR
        + + R
Subjt:  QRITR

AT4G29090.1 Ribonuclease H-like superfamily protein4.1e-0527.27Show/hide
Query:  IMWRLWNHGN----RNHTSNTMEAPTVLIKEIESNIKEWE---SSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSL
        ++WRLW + N    R    N  E    +++  E +++EW     +     KP+  RS  S   W+ P   + K NT ATW       G+GWV+ +  G +
Subjt:  IMWRLWNHGN----RNHTSNTMEAPTVLIKEIESNIKEWE---SSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSL

Query:  VCFGVQRITR
           G + + +
Subjt:  VCFGVQRITR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-0522.13Show/hide
Query:  IMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKP--KRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCFGV
        +MWR+W  GN    ++T       ++   ++ KEW  + + N +    R         W  P  +  K N  A+  +     GLGW++ +S G+++  G+
Subjt:  IMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKP--KRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVCFGV

Query:  QRITRKWEIKLLEAKTILLGIK
         +   +   +  E  T++  I+
Subjt:  QRITRKWEIKLLEAKTILLGIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGAATCTCAACAAGGAGGATACAACAAAGGGGGCTATTATTATGTGGAGACTATGGAATCACGGAAATAGAAACCACACCTCAAACACCATGGAAGCACCAAC
CGTCTTAATCAAGGAAATTGAGAGCAATATAAAAGAGTGGGAAAGTTCTTACCTTAAGAATCCCAAACCGAAAAGACTAAGGAGTCAAGTGAGTCTCGTCGTCTGGAAGA
AACCAAAGCCAAACTTCTGGAAATTGAACACGGGCGCAACGTGGTTCGACGCTAGGGGAGCTGGAGGCCTCGGATGGGTGGTGCACGACTCGAATGGGTCCTTAGTCTGT
TTCGGCGTCCAAAGAATTACACGAAAATGGGAAATCAAATTACTGGAAGCAAAAACAATTCTTCTGGGAATCAAGGAGATTAATCAAACCTTGTCTCCAAAATCAATTGG
GGCTGGAAGTCGAATTGGACGCCCTTACAGTGATCAAAGTCCTGCCCGGAGAAGAAGAAGACCTATCAGAGCTGCTCCTAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGAATCTCAACAAGGAGGATACAACAAAGGGGGCTATTATTATGTGGAGACTATGGAATCACGGAAATAGAAACCACACCTCAAACACCATGGAAGCACCAAC
CGTCTTAATCAAGGAAATTGAGAGCAATATAAAAGAGTGGGAAAGTTCTTACCTTAAGAATCCCAAACCGAAAAGACTAAGGAGTCAAGTGAGTCTCGTCGTCTGGAAGA
AACCAAAGCCAAACTTCTGGAAATTGAACACGGGCGCAACGTGGTTCGACGCTAGGGGAGCTGGAGGCCTCGGATGGGTGGTGCACGACTCGAATGGGTCCTTAGTCTGT
TTCGGCGTCCAAAGAATTACACGAAAATGGGAAATCAAATTACTGGAAGCAAAAACAATTCTTCTGGGAATCAAGGAGATTAATCAAACCTTGTCTCCAAAATCAATTGG
GGCTGGAAGTCGAATTGGACGCCCTTACAGTGATCAAAGTCCTGCCCGGAGAAGAAGAAGACCTATCAGAGCTGCTCCTAATTGTTGA
Protein sequenceShow/hide protein sequence
MVENLNKEDTTKGAIIMWRLWNHGNRNHTSNTMEAPTVLIKEIESNIKEWESSYLKNPKPKRLRSQVSLVVWKKPKPNFWKLNTGATWFDARGAGGLGWVVHDSNGSLVC
FGVQRITRKWEIKLLEAKTILLGIKEINQTLSPKSIGAGSRIGRPYSDQSPARRRRRPIRAAPNC