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Lag0023171 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023171
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioneukaryotic translation initiation factor 4B3-like
Genome locationchr7:45364741..45365106
RNA-Seq ExpressionLag0023171
SyntenyLag0023171
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR010433 - Plant specific eukaryotic initiation factor 4B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135918.1 eukaryotic translation initiation factor 4B3-like [Momordica charantia]9.0e-3082.02Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSS-----QGHTHED
        MAAMVSPWGKPGAWALDSEEHE+QLLKEE++QQKQ+EL L+FPSLNDALATK KK GQTLSLAEFNAYGGSG+RSS+     QG THED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSS-----QGHTHED

XP_022989048.1 eukaryotic translation initiation factor 4B3-like [Cucurbita maxima]4.9e-2880.46Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEE---EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED
        M AM SPWGKPGAWALDSEEHE++LLKEE   EQQQK++ELSL+FPSLNDALATK KK GQTLSLAEF A+GGSGS+ SSQG THED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEE---EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED

XP_023529687.1 eukaryotic translation initiation factor 4B3 [Cucurbita pepo subsp. pepo]7.1e-2777.27Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEE----EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED
        M AM SPWGKPGAWALDSEEHE++LLKEE    +QQQK++ELSL+FPSLNDALATK KK GQTLSLAEF A+ GSGS+ SSQG THED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEE----EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED

XP_038887904.1 eukaryotic translation initiation factor 4B3-like isoform X1 [Benincasa hispida]1.4e-2783.33Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED
        MAAMVSPWGKPGAWALDSEEHE+QLLKE+E  QKQ+ELSL+FPSLNDALATK KK GQTLSLAEFN YG +GSRSSSQ   HED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED

XP_038887905.1 eukaryotic translation initiation factor 4B3-like isoform X2 [Benincasa hispida]1.4e-2783.33Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED
        MAAMVSPWGKPGAWALDSEEHE+QLLKE+E  QKQ+ELSL+FPSLNDALATK KK GQTLSLAEFN YG +GSRSSSQ   HED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED

TrEMBL top hitse value%identityAlignment
A0A5A7U3A1 Eukaryotic translation initiation factor 4B31.4e-2385.53Show/hide
Query:  MAAMV-SPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRS
        MAAMV SPWGKPGAWALDSEEHE+QLLKE+E QQKQ ELSL+FPSLNDALATK KK GQTLSLAEFN YG +GSRS
Subjt:  MAAMV-SPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRS

A0A6J1C673 eukaryotic translation initiation factor 4B3-like4.4e-3082.02Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSS-----QGHTHED
        MAAMVSPWGKPGAWALDSEEHE+QLLKEE++QQKQ+EL L+FPSLNDALATK KK GQTLSLAEFNAYGGSG+RSS+     QG THED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSS-----QGHTHED

A0A6J1EKJ0 eukaryotic translation initiation factor 4B3 isoform X15.9e-2775.56Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEE------EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED
        M AM SPWGKPGAWALDSEEHE++LLKEE      +QQQK++ELSL+FPSLNDALATK KK GQTLSLAEF A+ GSGS+ SSQG THED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEE------EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED

A0A6J1ERF5 eukaryotic translation initiation factor 4B3 isoform X25.9e-2775.56Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEE------EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED
        M AM SPWGKPGAWALDSEEHE++LLKEE      +QQQK++ELSL+FPSLNDALATK KK GQTLSLAEF A+ GSGS+ SSQG THED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEE------EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED

A0A6J1JP41 eukaryotic translation initiation factor 4B3-like2.4e-2880.46Show/hide
Query:  MAAMVSPWGKPGAWALDSEEHESQLLKEE---EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED
        M AM SPWGKPGAWALDSEEHE++LLKEE   EQQQK++ELSL+FPSLNDALATK KK GQTLSLAEF A+GGSGS+ SSQG THED
Subjt:  MAAMVSPWGKPGAWALDSEEHESQLLKEE---EQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHED

SwissProt top hitse value%identityAlignment
Q9AUJ7 Eukaryotic translation initiation factor 4B13.0e-0435.29Show/hide
Query:  MVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSEL-----------SLNFPSLNDALAT----KPKKIGQTLSLAEFNAYGGSGS
        M  PWG  GAWALD+E       +E+E+++  +             + +FPSL +A+      + KK G TLSL+EF  YG +G+
Subjt:  MVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSEL-----------SLNFPSLNDALAT----KPKKIGQTLSLAEFNAYGGSGS

Q9SZP8 Eukaryotic translation initiation factor 4B34.8e-1048.75Show/hide
Query:  AAMVSPWGKPGAWALDSEEHESQLLKEEE--QQQKQSELSLNFPSLNDALATK-PKKIGQTLSLAEFNAYGGSGSRSSSQ
        AA+ S W KPGAWAL++EEHE++L ++     Q+  +E S +FPSL  A  TK  KK GQT+SLAEF  YG + ++ + Q
Subjt:  AAMVSPWGKPGAWALDSEEHESQLLKEEE--QQQKQSELSLNFPSLNDALATK-PKKIGQTLSLAEFNAYGGSGSRSSSQ

Arabidopsis top hitse value%identityAlignment
AT4G38710.1 glycine-rich protein3.4e-1148.75Show/hide
Query:  AAMVSPWGKPGAWALDSEEHESQLLKEEE--QQQKQSELSLNFPSLNDALATK-PKKIGQTLSLAEFNAYGGSGSRSSSQ
        AA+ S W KPGAWAL++EEHE++L ++     Q+  +E S +FPSL  A  TK  KK GQT+SLAEF  YG + ++ + Q
Subjt:  AAMVSPWGKPGAWALDSEEHESQLLKEEE--QQQKQSELSLNFPSLNDALATK-PKKIGQTLSLAEFNAYGGSGSRSSSQ

AT4G38710.2 glycine-rich protein3.4e-1148.75Show/hide
Query:  AAMVSPWGKPGAWALDSEEHESQLLKEEE--QQQKQSELSLNFPSLNDALATK-PKKIGQTLSLAEFNAYGGSGSRSSSQ
        AA+ S W KPGAWAL++EEHE++L ++     Q+  +E S +FPSL  A  TK  KK GQT+SLAEF  YG + ++ + Q
Subjt:  AAMVSPWGKPGAWALDSEEHESQLLKEEE--QQQKQSELSLNFPSLNDALATK-PKKIGQTLSLAEFNAYGGSGSRSSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAATGGTTTCTCCATGGGGAAAACCAGGCGCTTGGGCCCTCGACTCCGAGGAACACGAATCTCAACTCCTTAAAGAAGAGGAACAACAACAGAAACAATCAGA
GCTCAGCTTGAATTTTCCCTCCCTCAACGACGCATTGGCCACCAAACCGAAGAAGATAGGACAAACTCTCTCGTTGGCGGAGTTCAACGCCTATGGTGGCAGCGGCTCAA
GATCTTCTTCGCAGGGCCACACGCATGAAGATTTCACTCTGCGTCTCTTCTGCAAGATTCCCCAGGCTTTTTTTTTTCCGTATACATCTGGGTTTTTTTGCCGTACTGAT
TTTCTTTTTGACGTATCTTCTACGTTTCCCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAATGGTTTCTCCATGGGGAAAACCAGGCGCTTGGGCCCTCGACTCCGAGGAACACGAATCTCAACTCCTTAAAGAAGAGGAACAACAACAGAAACAATCAGA
GCTCAGCTTGAATTTTCCCTCCCTCAACGACGCATTGGCCACCAAACCGAAGAAGATAGGACAAACTCTCTCGTTGGCGGAGTTCAACGCCTATGGTGGCAGCGGCTCAA
GATCTTCTTCGCAGGGCCACACGCATGAAGATTTCACTCTGCGTCTCTTCTGCAAGATTCCCCAGGCTTTTTTTTTTCCGTATACATCTGGGTTTTTTTGCCGTACTGAT
TTTCTTTTTGACGTATCTTCTACGTTTCCCTGTTAA
Protein sequenceShow/hide protein sequence
MAAMVSPWGKPGAWALDSEEHESQLLKEEEQQQKQSELSLNFPSLNDALATKPKKIGQTLSLAEFNAYGGSGSRSSSQGHTHEDFTLRLFCKIPQAFFFPYTSGFFCRTD
FLFDVSSTFPC