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Lag0023187 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023187
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationchr7:45557509..45558265
RNA-Seq ExpressionLag0023187
SyntenyLag0023187
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsIPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAL35698.1 ribulose 1,5-bisphosphate carboxylase, partial [Rhynchospora nervosa]1.5e-1591.49Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVALEACVQACNEGRDLAREGNEII  A+KWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

AAY40331.1 ribulose-1,5-biphosphate carboxylase/oxygenase large subunit, partial [Amorphophallus discophorus]6.7e-1693.62Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVA EACVQACNEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

AAY54100.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Tachigali densiflora]1.1e-1595.56Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWK
        ANRVALEACVQACNEGRDLAREGNEII EASKWSPEL AACEVWK
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWK

CAC17905.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Kingia australis]1.5e-1593.75Show/hide
Query:  AANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        AANRVALEACVQA NEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  AANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

YP_009346346.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Leptaspis zeylanica]1.1e-1572.06Show/hide
Query:  GGMIVRPSPCSTCWPLKDILAANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        GG I  P      W      AANRVALEACVQA NEGRDLAREGNEII +ASKWSPEL AACEVWKAI
Subjt:  GGMIVRPSPCSTCWPLKDILAANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

TrEMBL top hitse value%identityAlignment
A0A1P8C5R6 Ribulose bisphosphate carboxylase large chain5.5e-1672.06Show/hide
Query:  GGMIVRPSPCSTCWPLKDILAANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        GG I  P      W      AANRVALEACVQA NEGRDLAREGNEII +ASKWSPEL AACEVWKAI
Subjt:  GGMIVRPSPCSTCWPLKDILAANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

H6T1K0 Ribulose bisphosphate carboxylase large chain7.2e-1693.75Show/hide
Query:  AANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        AANRVALEACVQA NEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  AANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

O63183 Ribulose bisphosphate carboxylase large chain (Fragment)7.2e-1691.49Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVALEACVQACNEGRDLAREGNEII  A+KWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

Q4U4J4 Ribulose bisphosphate carboxylase large chain (Fragment)3.2e-1693.62Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVA EACVQACNEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

Q4VIA6 Ribulose bisphosphate carboxylase large chain (Fragment)5.5e-1695.56Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWK
        ANRVALEACVQACNEGRDLAREGNEII EASKWSPEL AACEVWK
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWK

SwissProt top hitse value%identityAlignment
O20346 Ribulose bisphosphate carboxylase large chain (Fragment)4.4e-1893.62Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVALEACVQA NEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

O63094 Ribulose bisphosphate carboxylase large chain4.4e-1893.62Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVALEACVQA NEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

P28259 Ribulose bisphosphate carboxylase large chain (Fragment)4.4e-1893.62Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVALEACVQA NEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

P48697 Ribulose bisphosphate carboxylase large chain (Fragment)4.4e-1893.62Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVALEACVQA NEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

Q07210 Ribulose bisphosphate carboxylase large chain (Fragment)4.4e-1893.62Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVALEACVQA NEGRDLAREGNEII EASKWSPEL AACEVWKAI
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI

Arabidopsis top hitse value%identityAlignment
ATCG00490.1 ribulose-bisphosphate carboxylases3.8e-1787.23Show/hide
Query:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI
        ANRVALEACVQA NEGRDLA EGNEII EA KWSPEL AACEVWK I
Subjt:  ANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTACGGTGCGTGTTATATGAAGGGAACGCACTTTTTCGACCGCGGTGGTATGATTGTCAGGCCCTCTCCTTGTTCCACTTGCTGGCCATTAAAAGATATTTTGGC
TGCTAATCGAGTAGCTCTAGAAGCATGTGTACAAGCTTGTAATGAGGGACGTGATCTTGCTCGTGAGGGTAATGAAATTATCCATGAGGCTAGTAAATGGAGTCCTGAAC
TAGTTGCTGCTTGTGAAGTATGGAAGGCGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTACGGTGCGTGTTATATGAAGGGAACGCACTTTTTCGACCGCGGTGGTATGATTGTCAGGCCCTCTCCTTGTTCCACTTGCTGGCCATTAAAAGATATTTTGGC
TGCTAATCGAGTAGCTCTAGAAGCATGTGTACAAGCTTGTAATGAGGGACGTGATCTTGCTCGTGAGGGTAATGAAATTATCCATGAGGCTAGTAAATGGAGTCCTGAAC
TAGTTGCTGCTTGTGAAGTATGGAAGGCGATTTAG
Protein sequenceShow/hide protein sequence
MVYGACYMKGTHFFDRGGMIVRPSPCSTCWPLKDILAANRVALEACVQACNEGRDLAREGNEIIHEASKWSPELVAACEVWKAI