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Lag0023237 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023237
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr7:46328290..46328745
RNA-Seq ExpressionLag0023237
SyntenyLag0023237
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607243.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3756Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA
        M  PPSFAASPP  TA+ + +GL   +  LAL AIC +IILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSY+EAD   D DECA
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
        ICL+EF++ QKCR M  CGH+FH  CIDRWL+ ++ CPLCRSCVC+VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

KAG7036928.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3756.08Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA
        M  PPSFAASPP  TA+ + +GL   +  LAL AIC ++ILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSY+EAD   D DECA
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVV
        ICL+EF++ QKCR M  CGH+FHR CIDRWL+ ++HCPLCRSCVC+V+
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVV

XP_008457571.1 PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo]2.0e-3452.76Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRNNNVNESESVNAVAGELPALRE------NEMVQIEASDFSYREADRS
        MSSP   AASP     +  +F     D+Y  + AIC  II+YFI F+ Y++T NN+    +S      ELPA RE       E+VQIEA  FSYREA RS
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRNNNVNESESVNAVAGELPALRE------NEMVQIEASDFSYREADRS

Query:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
              DD  EC ICLN+F++ QKCR MKKCGH+FHRSCIDRWL+ E+ CPLCR+CVC+VV P
Subjt:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]3.5e-3958Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA
        M  PPSFAASPP  +A+   +GL   +  LAL AIC +IILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSYREAD   D DECA
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
        ICL+EF++ QKCR M KCGH+FHR CIDRWL+ ++HCPLCRSCVC+VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

XP_023524567.1 RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]2.7e-3957.33Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA
        M SPPSFAASPP  +A+ + +GL   +  LA+ AIC +IILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSY+EAD   D DECA
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
        ICL+EF++ QKCR M KCGH+FHR CIDRWL+ ++HCPLCRSCVC+VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

TrEMBL top hitse value%identityAlignment
A0A1S3C6H7 RING-H2 finger protein ATL66-like9.6e-3552.76Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRNNNVNESESVNAVAGELPALRE------NEMVQIEASDFSYREADRS
        MSSP   AASP     +  +F     D+Y  + AIC  II+YFI F+ Y++T NN+    +S      ELPA RE       E+VQIEA  FSYREA RS
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRNNNVNESESVNAVAGELPALRE------NEMVQIEASDFSYREADRS

Query:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
              DD  EC ICLN+F++ QKCR MKKCGH+FHRSCIDRWL+ E+ CPLCR+CVC+VV P
Subjt:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

A0A5A7VPW6 RING-H2 finger protein ATL66-like1.3e-3452.44Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRNNNVNESESVNAVAGELPALRE------NEMVQIEASDFSYREADRS
        MSSP   AASP     +  +F     D+Y  + AIC  II+YFI F+ Y++T NN+    +S      ELPA RE       E+VQIEA  FSYREA RS
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRNNNVNESESVNAVAGELPALRE------NEMVQIEASDFSYREADRS

Query:  -------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
               DD  EC ICLN+F++ QKCR MKKCGH+FHRSCIDRWL+ E+ CPLCR+CVC+VV P
Subjt:  -------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

A0A5D3BGV5 RING-H2 finger protein ATL66-like9.6e-3552.76Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRNNNVNESESVNAVAGELPALRE------NEMVQIEASDFSYREADRS
        MSSP   AASP     +  +F     D+Y  + AIC  II+YFI F+ Y++T NN+    +S      ELPA RE       E+VQIEA  FSYREA RS
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFS-YYRTRNNNVNESESVNAVAGELPALRE------NEMVQIEASDFSYREADRS

Query:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
              DD  EC ICLN+F++ QKCR MKKCGH+FHRSCIDRWL+ E+ CPLCR+CVC+VV P
Subjt:  ------DDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

A0A6J1DN25 RING-H2 finger protein ATL1-like1.3e-3455.26Show/hide
Query:  SPPSFAASPPATTAVA------DMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDS
        SPPS+ AS P+ T+ +         GL+L+DEY A+TAIC V ILYFI FS Y++R   +NESE      G  P +RE EMV+IEAS F+       DD 
Subjt:  SPPSFAASPPATTAVA------DMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDS

Query:  DECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVV
        +EC ICL EFK+ +KC +M KC HVFHR+CIDRWL+AE+HCPLCRSCVC+ V
Subjt:  DECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVV

A0A6J1KAT3 RING-type E3 ubiquitin transferase1.7e-3958Show/hide
Query:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA
        M  PPSFAASPP  +A+   +GL   +  LAL AIC +IILY I+ ++++      +E ES +  AG LP +RE E+V+IEAS FSYREAD   D DECA
Subjt:  MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECA

Query:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
        ICL+EF++ QKCR M KCGH+FHR CIDRWL+ ++HCPLCRSCVC+VV P
Subjt:  ICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL19.9e-1331.87Show/hide
Query:  PPATTAVADMFGLTL---VDEYLALTAICSVIILYFIVFSYY------------------RTRNNNVN-----ESESVNAVAGELPALRENEMVQIEASD
        PP+TT  + +F  T     +  +   A+  ++   F++ SYY                  R R+++ N         VN    E  A+R   + + +  D
Subjt:  PPATTAVADMFGLTL---VDEYLALTAICSVIILYFIVFSYY------------------RTRNNNVN-----ESESVNAVAGELPALRENEMVQIEASD

Query:  FSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCV
            E D+S +S EC++CLNEF+ED+K R++  C HVFH  CID WL+   +CPLCR+ V
Subjt:  FSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCV

Q8LFY8 RING-H2 finger protein ATL546.4e-1243.55Show/hide
Query:  SYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIV
        +Y+  D   +  +C +CLNEF+ED+  R++ KC H FH SCID WL +  +CPLCR+ + ++
Subjt:  SYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIV

Q9LF64 RING-H2 finger protein ATL529.9e-1326.88Show/hide
Query:  PPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVN-------------AVAGELPALRENEMVQIEASDFSYREA
        PPSF     ++++ +    L +    + +     +++ Y+ + S Y  R++  + SE++N              ++     L E+ +  I    + Y+  
Subjt:  PPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVN-------------AVAGELPALRENEMVQIEASDFSYREA

Query:  DRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
        D   D  +C++CL+EF+E++  R++ KC H FH  CID WL++  +CPLCR+ V  V +P
Subjt:  DRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

Q9LX93 E3 ubiquitin-protein ligase RING11.7e-1229.93Show/hide
Query:  TAIC---SVIILYFIVFSYYRTRNNNVNESESVNAVA---GELPALR-ENEMVQIEASDF----------------------SYREADRSDDSDECAICL
        T+IC   S+I+  F+VF  Y     ++ +   ++A +   G+      E+E  + + SDF                       +++ +   D  EC++CL
Subjt:  TAIC---SVIILYFIVFSYYRTRNNNVNESESVNAVA---GELPALR-ENEMVQIEASDF----------------------SYREADRSDDSDECAICL

Query:  NEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
        NEF+ED+  R++ KC H FH +CID WL + ++CPLCR+ V ++ +P
Subjt:  NEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

Q9SRQ8 RING-H2 finger protein ATL511.5e-1334.34Show/hide
Query:  FSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCV
        +++  T NNN N + + N   G       +E +    + + YR+ D   +S +C++CL+EF+E++  R++ KC H FH  CID WL++  +CPLCR+ +
Subjt:  FSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCV

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein7.1e-1431.87Show/hide
Query:  PPATTAVADMFGLTL---VDEYLALTAICSVIILYFIVFSYY------------------RTRNNNVN-----ESESVNAVAGELPALRENEMVQIEASD
        PP+TT  + +F  T     +  +   A+  ++   F++ SYY                  R R+++ N         VN    E  A+R   + + +  D
Subjt:  PPATTAVADMFGLTL---VDEYLALTAICSVIILYFIVFSYY------------------RTRNNNVN-----ESESVNAVAGELPALRENEMVQIEASD

Query:  FSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCV
            E D+S +S EC++CLNEF+ED+K R++  C HVFH  CID WL+   +CPLCR+ V
Subjt:  FSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCV

AT1G72220.1 RING/U-box superfamily protein4.6e-1343.55Show/hide
Query:  SYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIV
        +Y+  D   +  +C +CLNEF+ED+  R++ KC H FH SCID WL +  +CPLCR+ + ++
Subjt:  SYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIV

AT3G03550.1 RING/U-box superfamily protein1.1e-1434.34Show/hide
Query:  FSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCV
        +++  T NNN N + + N   G       +E +    + + YR+ D   +S +C++CL+EF+E++  R++ KC H FH  CID WL++  +CPLCR+ +
Subjt:  FSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCV

AT5G10380.1 RING/U-box superfamily protein1.2e-1329.93Show/hide
Query:  TAIC---SVIILYFIVFSYYRTRNNNVNESESVNAVA---GELPALR-ENEMVQIEASDF----------------------SYREADRSDDSDECAICL
        T+IC   S+I+  F+VF  Y     ++ +   ++A +   G+      E+E  + + SDF                       +++ +   D  EC++CL
Subjt:  TAIC---SVIILYFIVFSYYRTRNNNVNESESVNAVA---GELPALR-ENEMVQIEASDF----------------------SYREADRSDDSDECAICL

Query:  NEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
        NEF+ED+  R++ KC H FH +CID WL + ++CPLCR+ V ++ +P
Subjt:  NEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP

AT5G17600.1 RING/U-box superfamily protein7.1e-1426.88Show/hide
Query:  PPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVN-------------AVAGELPALRENEMVQIEASDFSYREA
        PPSF     ++++ +    L +    + +     +++ Y+ + S Y  R++  + SE++N              ++     L E+ +  I    + Y+  
Subjt:  PPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVN-------------AVAGELPALRENEMVQIEASDFSYREA

Query:  DRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP
        D   D  +C++CL+EF+E++  R++ KC H FH  CID WL++  +CPLCR+ V  V +P
Subjt:  DRSDDSDECAICLNEFKEDQKCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGCCGCCGTCTTTTGCCGCATCACCGCCGGCAACTACCGCCGTCGCCGACATGTTTGGACTGACATTGGTGGATGAGTATTTGGCTCTGACTGCAATTTGTTC
CGTGATCATACTGTACTTCATCGTCTTCAGTTACTACAGAACCAGAAATAATAATGTTAACGAATCGGAATCCGTCAATGCGGTGGCCGGAGAACTTCCGGCGTTGCGAG
AGAATGAGATGGTACAGATTGAGGCCTCGGATTTCAGTTACAGGGAAGCTGATCGAAGTGACGACAGCGATGAATGTGCGATTTGCCTTAACGAATTTAAAGAAGACCAA
AAGTGTAGAATGATGAAAAAGTGTGGCCATGTATTTCACCGGAGCTGCATTGACCGGTGGCTCAGGGCGGAGCAGCACTGCCCGCTTTGCCGGAGCTGCGTTTGCATCGT
CGTTGATCCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCGCCGCCGTCTTTTGCCGCATCACCGCCGGCAACTACCGCCGTCGCCGACATGTTTGGACTGACATTGGTGGATGAGTATTTGGCTCTGACTGCAATTTGTTC
CGTGATCATACTGTACTTCATCGTCTTCAGTTACTACAGAACCAGAAATAATAATGTTAACGAATCGGAATCCGTCAATGCGGTGGCCGGAGAACTTCCGGCGTTGCGAG
AGAATGAGATGGTACAGATTGAGGCCTCGGATTTCAGTTACAGGGAAGCTGATCGAAGTGACGACAGCGATGAATGTGCGATTTGCCTTAACGAATTTAAAGAAGACCAA
AAGTGTAGAATGATGAAAAAGTGTGGCCATGTATTTCACCGGAGCTGCATTGACCGGTGGCTCAGGGCGGAGCAGCACTGCCCGCTTTGCCGGAGCTGCGTTTGCATCGT
CGTTGATCCAAGATGA
Protein sequenceShow/hide protein sequence
MSSPPSFAASPPATTAVADMFGLTLVDEYLALTAICSVIILYFIVFSYYRTRNNNVNESESVNAVAGELPALRENEMVQIEASDFSYREADRSDDSDECAICLNEFKEDQ
KCRMMKKCGHVFHRSCIDRWLRAEQHCPLCRSCVCIVVDPR