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Lag0023242 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023242
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-H2 finger protein ATL14-like
Genome locationchr7:46342546..46343070
RNA-Seq ExpressionLag0023242
SyntenyLag0023242
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067736.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]3.0e-2649.31Show/hide
Query:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQS------------------EEEGSAATTIAFREIKTGEVADCDGSCA
        G +FV+VVC ++I  +F+FH YH RLR  QTR  DIE R       ++LA+ Q+                  EE  SA  T+A++ +K  E       CA
Subjt:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQS------------------EEEGSAATTIAFREIKTGEVADCDGSCA

Query:  ICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
        ICIE F DEEIC V+ESCGH FHEDC DQWLRIE RCPLCRC V
Subjt:  ICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

KAG7019192.1 E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-2540.88Show/hide
Query:  SSLPKSATQLNPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQS-----------
        S +  SAT LNP    TA +  N+ H         GL+ ++ +   +   +F+F  YH  L QYQTR  D+E   Q++H +R+ A F++           
Subjt:  SSLPKSATQLNPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQS-----------

Query:  ---------EEEGSAATTIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
                 EE  S  T +A+++IKT E AD D  CAICIEGF +EE+C V++ CGH FH+ C DQWL IE RCPLCRC V
Subjt:  ---------EEEGSAATTIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

TYJ97407.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]1.1e-2548.95Show/hide
Query:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSE-----------------EEGSAATTIAFREIKTGEVADCDGSCAI
        G +FV+VVC ++I  +F+FH YH RLR  QTR  DIE R       ++LA+ Q+E                 EE S+A      ++K  E       CAI
Subjt:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSE-----------------EEGSAATTIAFREIKTGEVADCDGSCAI

Query:  CIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
        CIE F DEEIC V+ESCGH FHEDC DQWLRIE RCPLCRC V
Subjt:  CIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

XP_022158253.1 RING-H2 finger protein ATL14-like [Momordica charantia]5.8e-3855.63Show/hide
Query:  NPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFREIKTGEVA
        +PPPQTTAAIHRN FHLT R  +A G MFV VVCA  IS +F+FHY       Y+TRVHD ESR Q     ++            A+ +A+RE    E+ 
Subjt:  NPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFREIKTGEVA

Query:  DCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
        DC G CAICIEGF +EE C VIE+CGHFFH+DC D+WL+IE RCPLCRC +
Subjt:  DCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

XP_031742489.1 RING-H2 finger protein ATL1-like [Cucumis sativus]1.5e-4158.82Show/hide
Query:  MSSPPPLSSLPKSATQLNPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHY-YHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEE
        MSSP P   +P+S T+   PP     IH + FHLT+R TIA GLM V V+CALMI F+FIFHY YHQRL         +    +SS +S   AE ++ EE
Subjt:  MSSPPPLSSLPKSATQLNPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHY-YHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEE

Query:  GSAATTIAFREIKTGEVADCDG-SCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
          A+  + FREIKTGE+ DCDG  CAICIEGFG+EEIC VIE+CGHFFH DC ++WLRIERRCPLCRCFV
Subjt:  GSAATTIAFREIKTGEVADCDG-SCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

TrEMBL top hitse value%identityAlignment
A0A5A7VMH1 RING-H2 finger protein ATL52-like1.4e-2649.31Show/hide
Query:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQS------------------EEEGSAATTIAFREIKTGEVADCDGSCA
        G +FV+VVC ++I  +F+FH YH RLR  QTR  DIE R       ++LA+ Q+                  EE  SA  T+A++ +K  E       CA
Subjt:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQS------------------EEEGSAATTIAFREIKTGEVADCDGSCA

Query:  ICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
        ICIE F DEEIC V+ESCGH FHEDC DQWLRIE RCPLCRC V
Subjt:  ICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

A0A5D3BE50 RING-type E3 ubiquitin transferase5.5e-2648.95Show/hide
Query:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSE-----------------EEGSAATTIAFREIKTGEVADCDGSCAI
        G +FV+VVC ++I  +F+FH YH RLR  QTR  DIE R       ++LA+ Q+E                 EE S+A      ++K  E       CAI
Subjt:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSE-----------------EEGSAATTIAFREIKTGEVADCDGSCAI

Query:  CIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
        CIE F DEEIC V+ESCGH FHEDC DQWLRIE RCPLCRC V
Subjt:  CIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

A0A6J1DVK4 RING-H2 finger protein ATL14-like2.8e-3855.63Show/hide
Query:  NPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFREIKTGEVA
        +PPPQTTAAIHRN FHLT R  +A G MFV VVCA  IS +F+FHY       Y+TRVHD ESR Q     ++            A+ +A+RE    E+ 
Subjt:  NPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFREIKTGEVA

Query:  DCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
        DC G CAICIEGF +EE C VIE+CGHFFH+DC D+WL+IE RCPLCRC +
Subjt:  DCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

A0A6J1DYV0 E3 ubiquitin-protein ligase RING1-like3.0e-2441.95Show/hide
Query:  SPPPLSSLPKSATQLNPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVH-DIESRFQSSHISRVLAEFQSEEEGS
        +PPP  S+  S       P T    HR      S F    G  FV  +C  +I   FI + YH+R+   QTRV+ DIESR Q S +  ++   ++ ++ S
Subjt:  SPPPLSSLPKSATQLNPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVH-DIESRFQSSHISRVLAEFQSEEEGS

Query:  -------AATTIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
                A+  A   I+  E+ D D  CAIC EGF ++++CRVIE CGHFFH+DC DQWL +ER CPLCRCFV
Subjt:  -------AATTIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

A0A6J1HJU0 RING-type E3 ubiquitin transferase7.9e-2543.84Show/hide
Query:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQS--------------------EEEGSAATTIAFREIKTGEVADCDGS
        GL+ ++ +  ++   +F+F  YH  L QYQTR  D+E   Q++H +R+ A F++                    EE  S  T +A+R+IKT E AD D  
Subjt:  GLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQS--------------------EEEGSAATTIAFREIKTGEVADCDGS

Query:  CAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV
        CAICIEGF +EEIC V++ CGH FH+ C DQWLRI  RCPLCRC +
Subjt:  CAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFV

SwissProt top hitse value%identityAlignment
Q8AWW4 E3 ubiquitin-protein ligase RNF1287.7e-0942.25Show/hide
Query:  EEGSAATTIAFREIKTGE-VADCDG-SCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRC
        E   A   +  R IK G+ V   DG SCA+CIE +   ++ R++ +C HFFH++C D WL   R CP+C+C
Subjt:  EEGSAATTIAFREIKTGE-VADCDG-SCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRC

Q8L9T5 RING-H2 finger protein ATL22.9e-0826.14Show/hide
Query:  NIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFREIK------------TGEVA
        N F  +  + ++G +M   +V    +  L +F   H   R Y  R      R +S +    +  F ++   +A + +A R +             + E  
Subjt:  NIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFREIK------------TGEVA

Query:  DCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVEN
             CA+C+  F + E  RV+ +C H FH DC D W      CPLCR  VE+
Subjt:  DCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVEN

Q8RXX9 E3 ubiquitin-protein ligase ATL63.8e-0837.7Show/hide
Query:  TIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR
        T  + ++KT ++   +  CAIC+  F D+E  R++  C H FH  C D WL     CP+CR
Subjt:  TIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR

Q9LSW9 RING-H2 finger protein ATL165.0e-0851.16Show/hide
Query:  CAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR
        C++C+  F DEE  R+I +C H FH DC D WL+    CPLCR
Subjt:  CAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR

Q9LZJ6 RING-H2 finger protein ATL51.7e-0829.8Show/hide
Query:  NIFHLTSRFTIAGGLMFVTVVCALMISFLFI-FHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAAT----------TIAFREIKTGEVAD
        N+ H +SR+++ G +M  +V+   +   L + FH Y + L + Q R   I  R  S+H+  + A     +  S+ +           I    +KT E   
Subjt:  NIFHLTSRFTIAGGLMFVTVVCALMISFLFI-FHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAAT----------TIAFREIKTGEVAD

Query:  CDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVE
            C++C+  F +++  RV+  CGH FH DC D W R    CPLCR  V+
Subjt:  CDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVE

Arabidopsis top hitse value%identityAlignment
AT1G80400.1 RING/U-box superfamily protein3.5e-0940Show/hide
Query:  RFQSSHISRVLAEFQSEEEGSAATTIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR
        RF+S   SR   EF  E EG     +     K   ++  D SC IC+  +GD+E  R +  C H FH DC D+WL+I   CPLC+
Subjt:  RFQSSHISRVLAEFQSEEEGSAATTIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR

AT3G05200.1 RING/U-box superfamily protein2.7e-0937.7Show/hide
Query:  TIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR
        T  + ++KT ++   +  CAIC+  F D+E  R++  C H FH  C D WL     CP+CR
Subjt:  TIAFREIKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR

AT3G16720.1 TOXICOS EN LEVADURA 22.1e-0926.14Show/hide
Query:  NIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFREIK------------TGEVA
        N F  +  + ++G +M   +V    +  L +F   H   R Y  R      R +S +    +  F ++   +A + +A R +             + E  
Subjt:  NIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFREIK------------TGEVA

Query:  DCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVEN
             CA+C+  F + E  RV+ +C H FH DC D W      CPLCR  VE+
Subjt:  DCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVEN

AT3G62690.1 AtL51.2e-0929.8Show/hide
Query:  NIFHLTSRFTIAGGLMFVTVVCALMISFLFI-FHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAAT----------TIAFREIKTGEVAD
        N+ H +SR+++ G +M  +V+   +   L + FH Y + L + Q R   I  R  S+H+  + A     +  S+ +           I    +KT E   
Subjt:  NIFHLTSRFTIAGGLMFVTVVCALMISFLFI-FHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAAT----------TIAFREIKTGEVAD

Query:  CDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVE
            C++C+  F +++  RV+  CGH FH DC D W R    CPLCR  V+
Subjt:  CDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVE

AT5G43420.1 RING/U-box superfamily protein3.5e-0951.16Show/hide
Query:  CAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR
        C++C+  F DEE  R+I +C H FH DC D WL+    CPLCR
Subjt:  CAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCTCCGCCGCTTTCCTCCCTGCCGAAATCTGCAACACAGCTAAACCCGCCGCCGCAGACGACGGCGGCGATTCATCGCAACATCTTCCACCTGACGAGCAG
GTTTACAATCGCAGGCGGATTGATGTTCGTGACGGTGGTTTGTGCTCTAATGATTTCGTTTCTGTTCATTTTTCATTATTACCACCAACGCCTCCGACAGTACCAGACAA
GAGTCCACGACATCGAGTCCAGATTCCAATCGAGCCATATCTCGCGGGTTCTCGCCGAGTTTCAGTCGGAAGAAGAAGGCTCCGCCGCCACGACGATCGCTTTCAGAGAA
ATTAAAACAGGGGAAGTTGCCGATTGCGATGGCAGCTGTGCGATTTGCATTGAGGGATTTGGGGACGAAGAGATTTGCCGAGTAATTGAGAGCTGCGGCCATTTTTTCCA
TGAGGATTGTGCGGATCAGTGGCTGAGAATTGAGAGGCGTTGCCCATTGTGCCGATGTTTTGTTGAGAATCGCCGTGAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCCTCCGCCGCTTTCCTCCCTGCCGAAATCTGCAACACAGCTAAACCCGCCGCCGCAGACGACGGCGGCGATTCATCGCAACATCTTCCACCTGACGAGCAG
GTTTACAATCGCAGGCGGATTGATGTTCGTGACGGTGGTTTGTGCTCTAATGATTTCGTTTCTGTTCATTTTTCATTATTACCACCAACGCCTCCGACAGTACCAGACAA
GAGTCCACGACATCGAGTCCAGATTCCAATCGAGCCATATCTCGCGGGTTCTCGCCGAGTTTCAGTCGGAAGAAGAAGGCTCCGCCGCCACGACGATCGCTTTCAGAGAA
ATTAAAACAGGGGAAGTTGCCGATTGCGATGGCAGCTGTGCGATTTGCATTGAGGGATTTGGGGACGAAGAGATTTGCCGAGTAATTGAGAGCTGCGGCCATTTTTTCCA
TGAGGATTGTGCGGATCAGTGGCTGAGAATTGAGAGGCGTTGCCCATTGTGCCGATGTTTTGTTGAGAATCGCCGTGAAAGTTGA
Protein sequenceShow/hide protein sequence
MSSPPPLSSLPKSATQLNPPPQTTAAIHRNIFHLTSRFTIAGGLMFVTVVCALMISFLFIFHYYHQRLRQYQTRVHDIESRFQSSHISRVLAEFQSEEEGSAATTIAFRE
IKTGEVADCDGSCAICIEGFGDEEICRVIESCGHFFHEDCADQWLRIERRCPLCRCFVENRRES