; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023254 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023254
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:46514158..46515669
RNA-Seq ExpressionLag0023254
SyntenyLag0023254
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4286159.1 unnamed protein product [Prunus armeniaca]2.4e-0831.84Show/hide
Query:  MAEEKDIKE----FSK-MKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSS
        MAE++D++E    F K + L+  E+ G + +E +D    ++ L    V  +LT +G N E F++ + + WG   +V +K   + L   +  T R KE  S
Subjt:  MAEEKDIKE----FSK-MKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSS

Query:  MVDHEYMTKPLFYLMNQKGTRKSTTWNS-------DFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEENI
        +      TKPL  +M  +                 DFCY CGR+GHV+ EC+     ++E +E  YG WL   S F  V +G+ I     P K++EE N 
Subjt:  MVDHEYMTKPLFYLMNQKGTRKSTTWNS-------DFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEENI

Query:  Q
        Q
Subjt:  Q

KAG6591872.1 hypothetical protein SDJN03_14218, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0546.88Show/hide
Query:  MAEEKDIKEFSKMKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKI
        M E++  K+  K+KL+E E+G VV+ EDNDID +D+ L+  + CKILT+K +N +  + L+PKI
Subjt:  MAEEKDIKEFSKMKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKI

PQM41385.1 hypothetical protein Pyn_04841 [Prunus yedoensis var. nudiflora]4.4e-0731.66Show/hide
Query:  MAEEKDIKE----FSK-MKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSS
        MA ++D+ E    F K + L+  EK G +++E ND    ++ L    V  +LT +G N E F++ + + WG   +V +K   + L   +  T   KE   
Subjt:  MAEEKDIKE----FSK-MKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSS

Query:  MVDHEYMTKPLFYLMNQKGTRKSTTWNS-------DFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEEN
        MV  + +TKPL  +M  +                 DFCY CGR+ HV+ EC+     + E +E  YG WL   S F+ V +G+ I     P K++EE N
Subjt:  MVDHEYMTKPLFYLMNQKGTRKSTTWNS-------DFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEEN

TXG48912.1 hypothetical protein EZV62_024787 [Acer yangbiense]2.1e-0424.47Show/hide
Query:  MAEEKDIKEFSKMKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGR--QKEGSSMVD
        M E +  K + K+ L+  E G V E+ D D  + + +++   V K+L+ K VN + F+ LI ++W   G+V++   D  ++C + +T +   ++   ++D
Subjt:  MAEEKDIKEFSKMKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGR--QKEGSSMVD

Query:  HEYMT-----------------KPLFYLMNQKGTRKSTTWN--------SDFCYQCGRLGHVMNECEEEDNEDE--EEEEAQYGPWLR
          + T                 KPL   +  K  +               +FCY CGR+GH   +C +++ + E  + +  +YG W+R
Subjt:  HEYMT-----------------KPLFYLMNQKGTRKSTTWN--------SDFCYQCGRLGHVMNECEEEDNEDE--EEEEAQYGPWLR

TXG54824.1 hypothetical protein EZV62_020080 [Acer yangbiense]2.7e-0432.26Show/hide
Query:  LSEAEKGGVV-EVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKT-GRQKEGSSMVDHEYMTKPLFYLMNQ
        LS AE+ GVV E  + +I++  KD+    V K+LT K VN E F+ LI +IW   G+V+       +   S +  G+       +D     +    L   
Subjt:  LSEAEKGGVV-EVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKT-GRQKEGSSMVDHEYMTKPLFYLMNQ

Query:  KGTRKSTTWN------SDFCYQCGRLGHVMNECEEEDNEDEEEE--EAQYGPWLR
        K T + TT +       +FCY CGR+GH + EC + D   +  E    +YG WL+
Subjt:  KGTRKSTTWN------SDFCYQCGRLGHVMNECEEEDNEDEEEE--EAQYGPWLR

TrEMBL top hitse value%identityAlignment
A0A314UV36 Uncharacterized protein2.1e-0731.66Show/hide
Query:  MAEEKDIKE----FSK-MKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSS
        MA ++D+ E    F K + L+  EK G +++E ND    ++ L    V  +LT +G N E F++ + + WG   +V +K   + L   +  T   KE   
Subjt:  MAEEKDIKE----FSK-MKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSS

Query:  MVDHEYMTKPLFYLMNQKGTRKSTTWNS-------DFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEEN
        MV  + +TKPL  +M  +                 DFCY CGR+ HV+ EC+     + E +E  YG WL   S F+ V +G+ I     P K++EE N
Subjt:  MVDHEYMTKPLFYLMNQKGTRKSTTWNS-------DFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEEN

A0A5C7GX56 CCHC-type domain-containing protein1.0e-0424.47Show/hide
Query:  MAEEKDIKEFSKMKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGR--QKEGSSMVD
        M E +  K + K+ L+  E G V E+ D D  + + +++   V K+L+ K VN + F+ LI ++W   G+V++   D  ++C + +T +   ++   ++D
Subjt:  MAEEKDIKEFSKMKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGR--QKEGSSMVD

Query:  HEYMT-----------------KPLFYLMNQKGTRKSTTWN--------SDFCYQCGRLGHVMNECEEEDNEDE--EEEEAQYGPWLR
          + T                 KPL   +  K  +               +FCY CGR+GH   +C +++ + E  + +  +YG W+R
Subjt:  HEYMT-----------------KPLFYLMNQKGTRKSTTWN--------SDFCYQCGRLGHVMNECEEEDNEDE--EEEEAQYGPWLR

A0A6J5VAT6 CCHC-type domain-containing protein1.1e-0831.84Show/hide
Query:  MAEEKDIKE----FSK-MKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSS
        MAE++D++E    F K + L+  E+ G + +E +D    ++ L    V  +LT +G N E F++ + + WG   +V +K   + L   +  T R KE  S
Subjt:  MAEEKDIKE----FSK-MKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSS

Query:  MVDHEYMTKPLFYLMNQKGTRKSTTWNS-------DFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEENI
        +      TKPL  +M  +                 DFCY CGR+GHV+ EC+     ++E +E  YG WL   S F  V +G+ I     P K++EE N 
Subjt:  MVDHEYMTKPLFYLMNQKGTRKSTTWNS-------DFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEENI

Query:  Q
        Q
Subjt:  Q

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGAAAAAGATATCAAGGAGTTCAGCAAGATGAAGCTATCTGAGGCAGAGAAGGGAGGGGTGGTAGAGGTTGAAGACAACGATATTGATAATACAGACAAAGA
TTTGAAGAAAGTAGCAGTGTGCAAGATCCTAACTTCCAAGGGAGTGAACGCTGAACATTTTCAGAGGTTGATTCCAAAGATTTGGGGAGCGGATGGGAAAGTTCAGATGA
AAAAAAGGGACGAAACACTTATGTGTGCAAGTTCAAAAACAGGAAGACAAAAAGAAGGGTCCTCGATGGTGGACCATGAATATATGACAAAGCCATTATTCTATTTGATG
AACCAAAAGGGAACAAGGAAATCAACGACTTGGAATTCAGACTTTTGCTACCAATGCGGGAGACTAGGCCACGTAATGAATGAATGTGAAGAAGAAGATAACGAGGATGA
AGAGGAGGAGGAGGCTCAGTATGGCCCGTGGCTTAGAGAAGGATCAATCTTCAGAACAGTCATCAAAGGAAAGAATATTCCAGGCAGGAACAGACCAGGAAAAGAGAAAG
AGGAAGAAAATATCCAGGAAGAAAACGTTGAGGAGATCACGAACTTGTTAGATGAAGTCGTCGGAACAGTCACCGGTGAAGAGCGCCGATCAGAGAACAACCAGCAGCAT
ACGGACGAGCAAATTGCAAAGGACAAAAAGGACCTAGTCAAATCAAGGCAGGTCAATCAACTGTCAGAAGCTTCAGGAAAAATAGCCGTTAAAACCAAAAGAGGAAAAGA
AGCAAGCGGTGAGAGAAACCAAGCGGTGGATAATATCACTGAAATGGAAAACAAAAGTCAGAACCATCCCAGTGACCAAGGGATAAAACAAGGAAAGGACAAACAAGTCA
TCAGTGTAGAGGAATCAGAAGAAAAGTCATATCAGGGGGGACCAGAGGAATTGCAAAATAAAAAGAAAAGCCCAATAAAAGTGTCTAGCCCAATAACAGTCATCAGCTCA
ACAGGCCAAACTACCCATATTTCAGGGGATAAAGCCAGAAAGAGAGACATGGAAGGTGAAAGCAACTCAAGCCCAAAAAAGAATTTAAAATCATGGAAAAGGCTGGCCAG
ATTTGAGCCCATGCAACTAGAGAATGCACAAACCATGGTCAGCCAATTAGGAAAAAGACATGGGCTGGAACTCTCTTCTGAAAGCAATACCAACAAGAAATTGAAAACCA
ACTGCTTCGAGGAAATCGGAGGGATATCGGCGGAGGCTGTGGAACAGCCTCGCCTGACGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGAAAAAGATATCAAGGAGTTCAGCAAGATGAAGCTATCTGAGGCAGAGAAGGGAGGGGTGGTAGAGGTTGAAGACAACGATATTGATAATACAGACAAAGA
TTTGAAGAAAGTAGCAGTGTGCAAGATCCTAACTTCCAAGGGAGTGAACGCTGAACATTTTCAGAGGTTGATTCCAAAGATTTGGGGAGCGGATGGGAAAGTTCAGATGA
AAAAAAGGGACGAAACACTTATGTGTGCAAGTTCAAAAACAGGAAGACAAAAAGAAGGGTCCTCGATGGTGGACCATGAATATATGACAAAGCCATTATTCTATTTGATG
AACCAAAAGGGAACAAGGAAATCAACGACTTGGAATTCAGACTTTTGCTACCAATGCGGGAGACTAGGCCACGTAATGAATGAATGTGAAGAAGAAGATAACGAGGATGA
AGAGGAGGAGGAGGCTCAGTATGGCCCGTGGCTTAGAGAAGGATCAATCTTCAGAACAGTCATCAAAGGAAAGAATATTCCAGGCAGGAACAGACCAGGAAAAGAGAAAG
AGGAAGAAAATATCCAGGAAGAAAACGTTGAGGAGATCACGAACTTGTTAGATGAAGTCGTCGGAACAGTCACCGGTGAAGAGCGCCGATCAGAGAACAACCAGCAGCAT
ACGGACGAGCAAATTGCAAAGGACAAAAAGGACCTAGTCAAATCAAGGCAGGTCAATCAACTGTCAGAAGCTTCAGGAAAAATAGCCGTTAAAACCAAAAGAGGAAAAGA
AGCAAGCGGTGAGAGAAACCAAGCGGTGGATAATATCACTGAAATGGAAAACAAAAGTCAGAACCATCCCAGTGACCAAGGGATAAAACAAGGAAAGGACAAACAAGTCA
TCAGTGTAGAGGAATCAGAAGAAAAGTCATATCAGGGGGGACCAGAGGAATTGCAAAATAAAAAGAAAAGCCCAATAAAAGTGTCTAGCCCAATAACAGTCATCAGCTCA
ACAGGCCAAACTACCCATATTTCAGGGGATAAAGCCAGAAAGAGAGACATGGAAGGTGAAAGCAACTCAAGCCCAAAAAAGAATTTAAAATCATGGAAAAGGCTGGCCAG
ATTTGAGCCCATGCAACTAGAGAATGCACAAACCATGGTCAGCCAATTAGGAAAAAGACATGGGCTGGAACTCTCTTCTGAAAGCAATACCAACAAGAAATTGAAAACCA
ACTGCTTCGAGGAAATCGGAGGGATATCGGCGGAGGCTGTGGAACAGCCTCGCCTGACGCCATGA
Protein sequenceShow/hide protein sequence
MAEEKDIKEFSKMKLSEAEKGGVVEVEDNDIDNTDKDLKKVAVCKILTSKGVNAEHFQRLIPKIWGADGKVQMKKRDETLMCASSKTGRQKEGSSMVDHEYMTKPLFYLM
NQKGTRKSTTWNSDFCYQCGRLGHVMNECEEEDNEDEEEEEAQYGPWLREGSIFRTVIKGKNIPGRNRPGKEKEEENIQEENVEEITNLLDEVVGTVTGEERRSENNQQH
TDEQIAKDKKDLVKSRQVNQLSEASGKIAVKTKRGKEASGERNQAVDNITEMENKSQNHPSDQGIKQGKDKQVISVEESEEKSYQGGPEELQNKKKSPIKVSSPITVISS
TGQTTHISGDKARKRDMEGESNSSPKKNLKSWKRLARFEPMQLENAQTMVSQLGKRHGLELSSESNTNKKLKTNCFEEIGGISAEAVEQPRLTP