CuGenDBv2

Gene ID	Lag0023255
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Rab5-interacting
Genome location	chr7:46516570..46518312
RNA-Seq Expression	Lag0023255
Synteny	Lag0023255
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0067751.1 Rab5-interacting [Cucumis melo var. makuwa]

8.1e-56

75.82

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGK++KV NSQLQHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLVNLMAS--FNSPSLSSDHNLHHLLLVQAAESFVSSSA
        GVLLQEGLFAS+TLFL+  + +   ++ S S+  ++  L+ + A  SF+S  A
Subjt:  GVLLQEGLFASITLFLVNLMAS--FNSPSLSSDHNLHHLLLVQAAESFVSSSA

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

2.4e-55

92.31

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGK++KV NSQLQHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLV
        GVLLQEGLFAS+TLFL+
Subjt:  GVLLQEGLFASITLFLV

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

2.1e-56

95.73

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGKSIKV NSQLQHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVA VCGLLWGS+PLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLV
        GVLLQEGLFASITLFL+
Subjt:  GVLLQEGLFASITLFLV

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

4.8e-56

94.87

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGKSIKV NSQLQHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVA VCGLLWGS+PLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLV
        GVLLQEGLFASITLFL+
Subjt:  GVLLQEGLFASITLFLV

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

4.8e-56

95.73

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGKS KV NSQLQHQNGHLPPFKLAKLFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLV
        GVLLQEGLFASITLFL+
Subjt:  GVLLQEGLFASITLFLV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

4.8e-54

93.16

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGKS+KV NSQLQ QNGHLPPFKLAKLFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLV
        GVLLQEGLFASITLFL+
Subjt:  GVLLQEGLFASITLFLV

A0A1S3C692 uncharacterized protein C20orf24 homolog

1.1e-55

92.31

Show/hide

Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGK++KV NSQLQHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLV
        GVLLQEGLFAS+TLFL+
Subjt:  GVLLQEGLFASITLFLV

A0A5A7VQ84 Rab5-interacting

3.9e-56

75.82

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGK++KV NSQLQHQNGHLPPFKLA+LFDPE SWDKDQLGDVLHWMRQSVA VCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLVNLMAS--FNSPSLSSDHNLHHLLLVQAAESFVSSSA
        GVLLQEGLFAS+TLFL+  + +   ++ S S+  ++  L+ + A  SF+S  A
Subjt:  GVLLQEGLFASITLFLVNLMAS--FNSPSLSSDHNLHHLLLVQAAESFVSSSA

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

1.0e-56

95.73

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGKSIKV NSQLQHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVA VCGLLWGS+PLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLV
        GVLLQEGLFASITLFL+
Subjt:  GVLLQEGLFASITLFLV

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

2.3e-56

94.87

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Query:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        MKDGKSIKV NSQLQHQNGHLPPFKLA LFDPEASWDKDQLGDVLHWMRQSVA VCGLLWGS+PLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGH
Subjt:  MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLV
        GVLLQEGLFASITLFL+
Subjt:  GVLLQEGLFASITLFLV

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

3.8e-16

39.52

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Query:  QLQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFAS
        Q Q  NG L     +K+   +A+W DKD+  DV++W RQ +A V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S
Subjt:  QLQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFAS

Query:  ITLFLVNLMASFNSPSLSSDHNLH
          LF+V +  SF +  L  DH LH
Subjt:  ITLFLVNLMASFNSPSLSSDHNLH

Q9CQT9 Respirasome Complex Assembly Factor 1

1.6e-14

39.62

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Query:  QLQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFAS
        Q Q  NG L     +K+   +A+W DKD+  DV++W RQ +A V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S
Subjt:  QLQHQNGHLPPFKLAKLFDPEASW-DKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFAS

Query:  ITLFLV
          LF+V
Subjt:  ITLFLV

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

7.6e-44

67.21

Show/hide

Query:  MKDGKSIKVNNSQLQ-----HQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEE
        MK+GKS K ++ Q Q     HQN HL  F  AKLFD EASWDKDQLGDVLHW+RQ V  +CGLLWG+IPLVGGIW +LFL IS+ +VYGYYA++LK+DEE
Subjt:  MKDGKSIKVNNSQLQ-----HQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASITLFLV
        +FGGH  LLQ+GLFAS++LFL+
Subjt:  EFGGHGVLLQEGLFASITLFLV

AT5G59410.1 Rab5-interacting family protein

4.3e-47

75.63

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Query:  MKDGKSIKVNNSQLQ--HQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFG
        MK+ KS K+N  Q Q  HQN HL P KLAKLFDP+ASWDKDQLGDVLHW+RQ V  + GLLWGSIPLVGGIW ILFL IS+ +VYGYYAMILKVDEE+FG
Subjt:  MKDGKSIKVNNSQLQ--HQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASITLFLV
        GH  LLQEGLFAS+TLFL+
Subjt:  GHGVLLQEGLFASITLFLV

Sequences

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CDS sequence

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ATGAAGGACGGGAAGTCGATTAAGGTCAACAATTCTCAGTTGCAGCACCAGAACGGTCACTTGCCGCCCTTCAAATTGGCCAAATTGTTCGATCCAGAGGCTTCGTGGGA
TAAGGATCAACTAGGAGATGTCTTGCATTGGATGCGACAGTCGGTTGCTTTTGTATGTGGACTGCTTTGGGGTTCGATACCTCTGGTTGGAGGCATTTGGTTCATCTTAT
TCTTGGTGATATCAACTACGATGGTATACGGATACTATGCAATGATTTTGAAAGTAGACGAAGAAGAATTCGGGGGTCATGGAGTTCTCCTCCAGGAAGGGCTTTTTGCT
TCCATAACTCTGTTTCTGGTAAATCTTATGGCATCTTTTAACTCTCCCTCTCTGTCTTCTGATCACAATCTGCATCATCTTCTGCTTGTGCAAGCTGCTGAGTCTTTTGT
TAGTTCAAGTGCTTATTTTCCTTTTCTTCTGTGTTGTTCAGCTTATGTGGACTCTCGTTTACAGCTTGGGACATTTCTGATGATCGTTTAG

mRNA sequence

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Protein sequence

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MKDGKSIKVNNSQLQHQNGHLPPFKLAKLFDPEASWDKDQLGDVLHWMRQSVAFVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFA
SITLFLVNLMASFNSPSLSSDHNLHHLLLVQAAESFVSSSAYFPFLLCCSAYVDSRLQLGTFLMIV

Lag0023255 (gene) of Sponge gourd (AG-4) v1 genome