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Lag0023265 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023265
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:46625108..46628423
RNA-Seq ExpressionLag0023265
SyntenyLag0023265
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262994.1 unnamed protein product [Prunus armeniaca]2.5e-1637.41Show/hide
Query:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK
        +LL KG+R  +GNG+SI+++T+ WL  PS FK++S P + +   +V D  T   QW+                 ++P       D  IWHY+  G YSVK
Subjt:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK

Query:  SGHKLCMLSS---CEDSMSGVGRESRWWKKLWRMNIPSK
        SG++L  L     C +S +GV   SR+WKK+W + IP+K
Subjt:  SGHKLCMLSS---CEDSMSGVGRESRWWKKLWRMNIPSK

PKA49974.1 Putative ribonuclease H protein [Apostasia shenzhenica]3.2e-1631.03Show/hide
Query:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK
        DLL+ G+R  +GNG S+++F DPWL RP +F+ I+ PN  +    + + +T D  W+                 E+P       D  IWH+D +G YSVK
Subjt:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK

Query:  SGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK-------------------GDIMFPINGLCPICKEELE
        SG+          + S  G  + WWKKLW   IP+K                          N +CP C E++E
Subjt:  SGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK-------------------GDIMFPINGLCPICKEELE

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]8.0e-1537.59Show/hide
Query:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK
        +LL KG+R  +GNG SI+++TD WL  PS FK++S P + +   +V D  T   QW+                 ++P       D  IWHY+  G YSVK
Subjt:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK

Query:  SGHKLCMLSSCEDSMSG-----VGRESRWWKKLWRMNIPSK
        SG++L  L   +D MSG     V   S++WKK+W + IP+K
Subjt:  SGHKLCMLSSCEDSMSG-----VGRESRWWKKLWRMNIPSK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.7e-2139.71Show/hide
Query:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD------------------------EVPDKWIWHYDARGEYSVK
        DLL KG+R  +GNG +IK F+DPWL RP+TFK + F N A+ D  VA FIT D  WD                         + D W+WHYD RG YSV+
Subjt:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD------------------------EVPDKWIWHYDARGEYSVK

Query:  SGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK
        SG+KL M   C  + +        W  +W++ +P+K
Subjt:  SGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]5.0e-1737.78Show/hide
Query:  LLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWDEV------------------------PDKWIWHYDARGEYSVKS
        +++KG+R  +GNG+ I +F+D WL RP TF+ I FP      +VVAD I  D QWDE+                         D+ +WHYD RG YSVKS
Subjt:  LLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWDEV------------------------PDKWIWHYDARGEYSVKS

Query:  GHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK
        G++L + S   DS S      ++W  LW + +P K
Subjt:  GHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK

TrEMBL top hitse value%identityAlignment
A0A2I0A354 Ribonuclease H protein1.6e-1631.03Show/hide
Query:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK
        DLL+ G+R  +GNG S+++F DPWL RP +F+ I+ PN  +    + + +T D  W+                 E+P       D  IWH+D +G YSVK
Subjt:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK

Query:  SGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK-------------------GDIMFPINGLCPICKEELE
        SG+          + S  G  + WWKKLW   IP+K                          N +CP C E++E
Subjt:  SGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK-------------------GDIMFPINGLCPICKEELE

A0A6J1DX30 uncharacterized protein LOC1110248744.7e-2139.71Show/hide
Query:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD------------------------EVPDKWIWHYDARGEYSVK
        DLL KG+R  +GNG +IK F+DPWL RP+TFK + F N A+ D  VA FIT D  WD                         + D W+WHYD RG YSV+
Subjt:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD------------------------EVPDKWIWHYDARGEYSVK

Query:  SGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK
        SG+KL M   C  + +        W  +W++ +P+K
Subjt:  SGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK

A0A6J5TGK7 CCHC-type domain-containing protein1.2e-1637.41Show/hide
Query:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK
        +LL KG+R  +GNG+SI+++T+ WL  PS FK++S P + +   +V D  T   QW+                 ++P       D  IWHY+  G YSVK
Subjt:  DLLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWD-----------------EVP-------DKWIWHYDARGEYSVK

Query:  SGHKLCMLSS---CEDSMSGVGRESRWWKKLWRMNIPSK
        SG++L  L     C +S +GV   SR+WKK+W + IP+K
Subjt:  SGHKLCMLSS---CEDSMSGVGRESRWWKKLWRMNIPSK

A0A803Q1K6 Uncharacterized protein5.4e-1738.52Show/hide
Query:  LLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWDE-----------------VP-------DKWIWHYDARGEYSVKS
        L+ KG R  +GNG+S+++  DPWL RP TFKV   P++   +  V D    D QWDE                 +P       DK +WHY   GEYSVKS
Subjt:  LLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWDE-----------------VP-------DKWIWHYDARGEYSVKS

Query:  GHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK
        G+++    + E   S      +WWKKLWR+N P K
Subjt:  GHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK

A0A803QQT2 Uncharacterized protein1.6e-1638.52Show/hide
Query:  LLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWDE-----------------VP-------DKWIWHYDARGEYSVKS
        L+ KG R  +GNG+S+++  DPWL RP TFKV   P++   +  V D    D QWDE                 +P       DK +WHY   GEYSVKS
Subjt:  LLRKGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWDE-----------------VP-------DKWIWHYDARGEYSVKS

Query:  GHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK
        G+++    + E   S      +WWKKLWR+ IP K
Subjt:  GHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGTCGAGTTCAGATCTCGTGCCGCGAACCAATTCGATTCGGAAAGCTTTAGCGAGCTTCGACAGTTCGAATGTGTCAGCTGTACGAGTTCAGATCCCGTGGGTCA
GCTTTGGCGTGGGTCACGTCGAACGAGGAGAAGGGAGTTCCTCCTCCCTCATCCTCTTTTCTATTATAAAAAAAATGGAGTTAAAGGAGAAGAAAAGAGAAGAAAGAAAG
AAAAACAGAAGAAGAAGAAGAAGAAGAAGAAGGTTTGTCGGTTGGTGTTGAGCAGCCACCGGAGACCAGTTGAAAAGGAAGAAGAAAAAGGAGTTGGGGATCTTCTTAGG
AAAGGAGTTAGGAAGAATATGGGAAATGGCCAATCAATAAAATTATTTACGGATCCATGGCTTCTGCGACCTTCCACTTTCAAGGTAATATCGTTTCCTAATGTAGCGAT
GAAAGATGCAGTTGTGGCTGATTTTATTACGCCAGATCTGCAATGGGATGAGGTTCCGGATAAGTGGATTTGGCATTACGATGCTAGAGGAGAGTATTCAGTGAAGAGTG
GGCACAAGCTATGTATGTTGTCAAGTTGTGAAGATTCTATGTCTGGAGTAGGGAGGGAATCGAGATGGTGGAAAAAGCTGTGGAGGATGAATATCCCTAGCAAGGGAGAC
ATCATGTTCCCTATTAATGGCCTTTGTCCAATTTGCAAGGAGGAGTTGGAGACTACAGTGTGTCAGGGCTCGGGAGGTATGGGATCTTCTTTGTCCCATGTTAGAAGGGT
TTTCTCAGCCTATGGACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGTCGAGTTCAGATCTCGTGCCGCGAACCAATTCGATTCGGAAAGCTTTAGCGAGCTTCGACAGTTCGAATGTGTCAGCTGTACGAGTTCAGATCCCGTGGGTCA
GCTTTGGCGTGGGTCACGTCGAACGAGGAGAAGGGAGTTCCTCCTCCCTCATCCTCTTTTCTATTATAAAAAAAATGGAGTTAAAGGAGAAGAAAAGAGAAGAAAGAAAG
AAAAACAGAAGAAGAAGAAGAAGAAGAAGAAGGTTTGTCGGTTGGTGTTGAGCAGCCACCGGAGACCAGTTGAAAAGGAAGAAGAAAAAGGAGTTGGGGATCTTCTTAGG
AAAGGAGTTAGGAAGAATATGGGAAATGGCCAATCAATAAAATTATTTACGGATCCATGGCTTCTGCGACCTTCCACTTTCAAGGTAATATCGTTTCCTAATGTAGCGAT
GAAAGATGCAGTTGTGGCTGATTTTATTACGCCAGATCTGCAATGGGATGAGGTTCCGGATAAGTGGATTTGGCATTACGATGCTAGAGGAGAGTATTCAGTGAAGAGTG
GGCACAAGCTATGTATGTTGTCAAGTTGTGAAGATTCTATGTCTGGAGTAGGGAGGGAATCGAGATGGTGGAAAAAGCTGTGGAGGATGAATATCCCTAGCAAGGGAGAC
ATCATGTTCCCTATTAATGGCCTTTGTCCAATTTGCAAGGAGGAGTTGGAGACTACAGTGTGTCAGGGCTCGGGAGGTATGGGATCTTCTTTGTCCCATGTTAGAAGGGT
TTTCTCAGCCTATGGACATTAA
Protein sequenceShow/hide protein sequence
MPVEFRSRAANQFDSESFSELRQFECVSCTSSDPVGQLWRGSRRTRRREFLLPHPLFYYKKNGVKGEEKRRKKEKQKKKKKKKKVCRLVLSSHRRPVEKEEEKGVGDLLR
KGVRKNMGNGQSIKLFTDPWLLRPSTFKVISFPNVAMKDAVVADFITPDLQWDEVPDKWIWHYDARGEYSVKSGHKLCMLSSCEDSMSGVGRESRWWKKLWRMNIPSKGD
IMFPINGLCPICKEELETTVCQGSGGMGSSLSHVRRVFSAYGH