; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023285 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023285
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmaternal effect embryo arrest 60
Genome locationchr7:46835945..46836484
RNA-Seq ExpressionLag0023285
SyntenyLag0023285
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031767.1 uncharacterized protein E6C27_scaffold848G00060 [Cucumis melo var. makuwa]1.2e-7888.27Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRSTSTRIH++ALDGIVNVNSLFTFAVFLGVAWYPTA+PAANLL D DDGPCA+  +VA+NLIACHVYSFSCFLFSSL+ASALKQAIRII GGD
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GGQG  HA  LRVGMVASAVGSVLGCGFLVAALLNLVQIKLG FGCRRWETVAAAVPLVSLVP ALFIYIALV+HAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

KAE8653265.1 hypothetical protein Csa_020061 [Cucumis sativus]5.0e-7788.95Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRSTSTRIH++ALDGIVNVNSLFTFAVFLGVAWYPTA+PAANLL D DDGPCA+  +VAENLIACHVYSFSCFLFSSL+ASALKQAIR+I+GGD
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIAL
        GGQG  HAPALRVGM+ASAVGSVLGCGFLVAALLNL+QIKLG FGCRRWETVAAAVPLVSLVPLALFIYIAL
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIAL

XP_008457431.1 PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo]8.2e-8089.39Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRSTSTRIH++ALDGIVNVNSLFTFAVFLGVAWYPTA+PAANLL D DDGPCA+  +VA+NLIACHVYSFSCFLFSSL+ASALKQAIRII GGD
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GGQG  HA ALRVGMVASAVGSVLGCGFLVAALLNLVQIKLG FGCRRWETVAAAVPLVSLVPLALFIYIALV+HAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

XP_011658339.1 uncharacterized protein LOC101206623 [Cucumis sativus]7.4e-8188.83Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRSTSTRIH++ALDGIVNVNSLFTFAVFLGVAWYPTA+PAANLL D DDGPCA+  +VAENLIACHVYSFSCFLFSSL+ASALKQAIR+I+GGD
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GGQG  HAPALRVGM+ASAVGSVLGCGFLVAALLNL+QIKLG FGCRRWETVAAAVPLVSLVPLALFIYIALV+HAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

XP_022970573.1 uncharacterized protein LOC111469508 [Cucurbita maxima]5.0e-7786.59Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRS+STRIHVMALDGIVNVNSLFTFAVFLG+ WYPTADP  NLL D DDGPCA  AA A++LIACHVYSFSCFLFSSLVASALKQAIRII   D
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GG G  HAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLG FGCRRWETVAA VPLVSLVP+ALFIYI LVLHAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

TrEMBL top hitse value%identityAlignment
A0A0A0LV03 Uncharacterized protein3.6e-8188.83Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRSTSTRIH++ALDGIVNVNSLFTFAVFLGVAWYPTA+PAANLL D DDGPCA+  +VAENLIACHVYSFSCFLFSSL+ASALKQAIR+I+GGD
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GGQG  HAPALRVGM+ASAVGSVLGCGFLVAALLNL+QIKLG FGCRRWETVAAAVPLVSLVPLALFIYIALV+HAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

A0A1S3C532 uncharacterized protein LOC1034971224.0e-8089.39Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRSTSTRIH++ALDGIVNVNSLFTFAVFLGVAWYPTA+PAANLL D DDGPCA+  +VA+NLIACHVYSFSCFLFSSL+ASALKQAIRII GGD
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GGQG  HA ALRVGMVASAVGSVLGCGFLVAALLNLVQIKLG FGCRRWETVAAAVPLVSLVPLALFIYIALV+HAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

A0A5A7SQP6 Uncharacterized protein5.8e-7988.27Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRSTSTRIH++ALDGIVNVNSLFTFAVFLGVAWYPTA+PAANLL D DDGPCA+  +VA+NLIACHVYSFSCFLFSSL+ASALKQAIRII GGD
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GGQG  HA  LRVGMVASAVGSVLGCGFLVAALLNLVQIKLG FGCRRWETVAAAVPLVSLVP ALFIYIALV+HAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

A0A5D3BFZ3 Uncharacterized protein4.0e-8089.39Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRSTSTRIH++ALDGIVNVNSLFTFAVFLGVAWYPTA+PAANLL D DDGPCA+  +VA+NLIACHVYSFSCFLFSSL+ASALKQAIRII GGD
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GGQG  HA ALRVGMVASAVGSVLGCGFLVAALLNLVQIKLG FGCRRWETVAAAVPLVSLVPLALFIYIALV+HAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

A0A6J1I4A7 uncharacterized protein LOC1114695082.4e-7786.59Show/hide
Query:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD
        MS  PRRRS+STRIHVMALDGIVNVNSLFTFAVFLG+ WYPTADP  NLL D DDGPCA  AA A++LIACHVYSFSCFLFSSLVASALKQAIRII   D
Subjt:  MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGD

Query:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
        GG G  HAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLG FGCRRWETVAA VPLVSLVP+ALFIYI LVLHAFTR
Subjt:  GGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01580.1 unknown protein6.4e-2236.46Show/hide
Query:  SGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGDG
        S T    +++T +HV ALDGIV+ NSLFT AVF+G+++   +D     L   D   C++   V  +L+   V SF+ FLFSSLVA  +K AI +++  + 
Subjt:  SGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGDG

Query:  GQ---GVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
         +      +   LR G+V +A GS+LGC FL+ ++++++Q++LG   C     +   + LV LV  AL +YI  V ++F +
Subjt:  GQ---GVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR

AT3G07510.1 unknown protein3.9e-2744.2Show/hide
Query:  TPRRRSTS----TRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGG
        +P   STS    T +HV ALDG+VNVNSLFT AVF+G++    A P  + L+      C ++A VA+ L+   V SFS FLFSSLVA  LK A+ +++  
Subjt:  TPRRRSTS----TRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGG

Query:  DGGQ---GVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAF
        D  +      +   LR GM+ASAVGSV+GC FL+ +++N++QI+LG   C       A   LV+LV  AL IYI+  ++AF
Subjt:  DGGQ---GVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAF

AT3G07510.2 unknown protein3.9e-2744.2Show/hide
Query:  TPRRRSTS----TRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGG
        +P   STS    T +HV ALDG+VNVNSLFT AVF+G++    A P  + L+      C ++A VA+ L+   V SFS FLFSSLVA  LK A+ +++  
Subjt:  TPRRRSTS----TRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGG

Query:  DGGQ---GVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAF
        D  +      +   LR GM+ASAVGSV+GC FL+ +++N++QI+LG   C       A   LV+LV  AL IYI+  ++AF
Subjt:  DGGQ---GVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAF

AT3G46890.1 BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1)3.6e-3349.74Show/hide
Query:  RRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVA-----WYPTADPAANLLDDGDDGPCAST--AAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISG
        RR   +T IHV A+DGIVNVNSLF+ A+FLG+       +P +  A+   ++     C S    A+AE L++ HVYSFS FLFSSL+A +LKQAIR  + 
Subjt:  RRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVA-----WYPTADPAANLLDDGDDGPCAST--AAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISG

Query:  G-------------DGGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRR-WETVAAAVPLVSLVPLALFIYIALVLHAF
                      + G+G  +  ALRVG+VAS V SVLGCGFL  AL++LVQIKLG   C+R +  +AA VPLV LVP AL IY+ LVL+AF
Subjt:  G-------------DGGQGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRR-WETVAAAVPLVSLVPLALFIYIALVLHAF

AT5G05950.1 maternal effect embryo arrest 601.6e-4157.87Show/hide
Query:  STRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIR--------IISGGDGG
        +T IH+ ALDGIVNVNSLFT AVF+G+AW PT DP  +L+ D +   C  TA +AENL+A HVYSF+ FLFSSL+A  LKQA+R        I +  D  
Subjt:  STRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIR--------IISGGDGG

Query:  QGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGC-RRWETVAAAVPLVSLVPLALFIYIALVLHAFTR
            +  ALR GMV S +GSV GCGFL+ AL+N+VQIKLGT GC     T AA VPLV LVP ALFIY++L+L+AFTR
Subjt:  QGVAHAPALRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGC-RRWETVAAAVPLVSLVPLALFIYIALVLHAFTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGCACCCCACGGCGGCGCTCCACCTCCACCAGAATCCACGTCATGGCCCTCGACGGCATCGTCAACGTCAACTCCCTCTTCACCTTCGCCGTCTTCCTCGGCGT
CGCCTGGTACCCCACCGCCGACCCCGCTGCCAACCTTCTCGACGACGGAGACGACGGCCCCTGCGCCTCCACCGCCGCCGTCGCCGAGAACCTCATCGCCTGCCACGTGT
ACTCCTTCAGCTGCTTCCTCTTCTCCAGCCTGGTCGCCTCGGCGCTGAAGCAGGCGATTAGGATCATCAGCGGCGGCGATGGAGGGCAGGGTGTGGCCCACGCGCCGGCT
CTGCGAGTGGGGATGGTGGCGTCGGCAGTCGGGTCGGTTCTCGGGTGCGGGTTTTTGGTGGCGGCGCTGCTGAATTTGGTTCAGATAAAATTGGGGACTTTCGGTTGCCG
GCGGTGGGAGACGGTGGCGGCCGCCGTGCCGTTGGTGAGTTTGGTTCCGTTGGCGCTTTTCATTTACATCGCTCTTGTTCTTCACGCCTTCACGCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGCACCCCACGGCGGCGCTCCACCTCCACCAGAATCCACGTCATGGCCCTCGACGGCATCGTCAACGTCAACTCCCTCTTCACCTTCGCCGTCTTCCTCGGCGT
CGCCTGGTACCCCACCGCCGACCCCGCTGCCAACCTTCTCGACGACGGAGACGACGGCCCCTGCGCCTCCACCGCCGCCGTCGCCGAGAACCTCATCGCCTGCCACGTGT
ACTCCTTCAGCTGCTTCCTCTTCTCCAGCCTGGTCGCCTCGGCGCTGAAGCAGGCGATTAGGATCATCAGCGGCGGCGATGGAGGGCAGGGTGTGGCCCACGCGCCGGCT
CTGCGAGTGGGGATGGTGGCGTCGGCAGTCGGGTCGGTTCTCGGGTGCGGGTTTTTGGTGGCGGCGCTGCTGAATTTGGTTCAGATAAAATTGGGGACTTTCGGTTGCCG
GCGGTGGGAGACGGTGGCGGCCGCCGTGCCGTTGGTGAGTTTGGTTCCGTTGGCGCTTTTCATTTACATCGCTCTTGTTCTTCACGCCTTCACGCGCTAG
Protein sequenceShow/hide protein sequence
MSGTPRRRSTSTRIHVMALDGIVNVNSLFTFAVFLGVAWYPTADPAANLLDDGDDGPCASTAAVAENLIACHVYSFSCFLFSSLVASALKQAIRIISGGDGGQGVAHAPA
LRVGMVASAVGSVLGCGFLVAALLNLVQIKLGTFGCRRWETVAAAVPLVSLVPLALFIYIALVLHAFTR